Gcaud2707.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2707.t1
Unique NameGcaud2707.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length235
Homology
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A2V3IPT0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPT0_9FLOR)

HSP 1 Score: 256 bits (655), Expect = 2.120e-83
Identity = 131/234 (55.98%), Postives = 167/234 (71.37%), Query Frame = 0
Query:    1 MNCSEPAIELRLKALQCPVPPNPADALLVQKQICWLEDVYIRRYAIADRKALRKTDYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPGISTSPIVSTAIDSLREALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            M+CS+ AI+LRL AL+CP+P +P             EDV+IRRY I  R+ LR+ DYRS LNAYLRLL+AP  AYASP   RNFL+++AINL Y DNA  +NTP DPWQSR LPVV G+S S  V+ A++ LR+ LQL   +GV +A VAAAAADA+EVLT + +    E  I+ + I  +T+D Q+R   C +RLL+VRRLR+LQD +N +IS MQ+ITA P TD+KLGKVGR
Sbjct:    1 MDCSDEAIDLRLSALKCPIPESPT------------EDVHIRRYPIEQREPLRRKDYRSGLNAYLRLLNAPPNAYASPKQTRNFLIELAINLQYRDNATRYNTPFDPWQSRCLPVVRGVSNSEQVARALEELRQVLQLTKVDGVSNASVAAAAADAIEVLTTEQVPLPPESVIEKMAIGFDTQDAQLRNVVCAMRLLFVRRLRSLQDNVNTLISGMQAITANPHTDSKLGKVGR 222          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A5J4XVR1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVR1_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 9.130e-23
Identity = 82/252 (32.54%), Postives = 120/252 (47.62%), Query Frame = 0
Query:    9 ELRLKALQCPVPPNPA--DALLVQKQICWLEDVYIRRYAIADRKAL---RKTDYRSALNAYLRLLDAPVTAYASPIDA-RNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPGISTS---------PIVSTAIDSLREALQLPD----------AEGVDSADVAAAAADA-VEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            +L LKAL+ P P      D +     I WLE+  +R+Y+I DRKAL   R   +      Y++ +  P+   AS   A  ++LL  AI+L Y D A  FNT     QSR  P +               P  S AI  L + LQL D          A  + S  +  A  D+ +    R+  T  +  ++D  P+   T DK+   A  +LR+LY++ LR LQ  I++ +  +Q+ TA P TDA LG++GR
Sbjct:    5 DLLLKALKYPKPSKNLVEDDVNFASLIVWLENTKVRQYSIEDRKALSDTRNPSWDGVFRKYVKDVQCPIALEASSKAAVLDWLLSYAISLEYQDQADKFNTAALS-QSRHKPALSSSQQEQHVYTDIDDPQTSEAIQHLLKQLQLVDTNAPMESLQAARNMVSDQLLPALEDSQLSSAAREAATQLSHLDVDKFPLGFTTGDKKTDVAATILRMLYIKDLRGLQTIIDETLVNVQNYTANPKTDAALGRIGR 255          
BLAST of Gcaud2707.t1 vs. uniprot
Match: R7VLV1_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VLV1_CAPTE)

HSP 1 Score: 96.3 bits (238), Expect = 1.530e-20
Identity = 83/245 (33.88%), Postives = 118/245 (48.16%), Query Frame = 0
Query:   11 RLKALQCPVPP--NPADALLVQKQICWLEDVYIRRYAIADRKALRKT---DYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPG--ISTSPIVSTA-IDSLREALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDT----EQN---------IDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            +L AL  P P   N  D    +K + WLED  IR Y I DR ALR     ++  AL  YL  +  P+ A+ +  +  ++LL  A+ L Y DN   + T  +  +S      P   I  +   S A I SL   L+LP                A+ +L R+ L+ D     ++N         I+ L +  ET D   + A  VLRLLY+R LR LQ+  N+ +  +Q++TA+P TD KLGKVGR
Sbjct:    5 KLTALDHPDPNGLNATDEEQFRKLMVWLEDQKIRHYKIEDRTALRNVCAGNWNDALKKYLEDISCPLRAH-NRNELVDWLLGYAVRLEYGDNTDKYRTASNNVKSHTKSGNPLDLIDFNDADSKAGILSLAAILELPPHPDH------IVQLKAISILVREKLSKDAIASVQKNGIPKPNTIPIEKLSLGFETSDYISQEAAKVLRLLYIRELRDLQNSANEAVVAVQTLTADPKTDTKLGKVGR 242          
BLAST of Gcaud2707.t1 vs. uniprot
Match: T1ERB6_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1ERB6_HELRO)

HSP 1 Score: 88.6 bits (218), Expect = 8.500e-18
Identity = 70/213 (32.86%), Postives = 98/213 (46.01%), Query Frame = 0
Query:   33 ICWLEDVYIRRYAIADRKALRKT---DYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPGISTSPIVSTAIDSLREALQLPDAEGVDSADVAAA---------AADAVEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVG 233
            +CWLED  I  Y   DR  LRK    D+ +    YL  L  PV +    I   N+LL +AI L Y +             S   P+     TS      + SL + L +P     DS  +  A         + DA+E L +  +      ++D + +  ET D   + A  +LRLLY++ LR LQD  N+ I   Q+ITA P TD++LGKVG
Sbjct:   15 VCWLEDKRINHYQPDDRAGLRKICAGDWENHFLKYLNDLGCPVDS-KEKILVINWLLSLAIRLEYGNKINKMKVTYGSGSSSCNPLENMDFTSEEFRAGVTSLGKMLNMPPHN--DSLTLLRAICLLVKEKLSKDALERLKKQGIKQAASISLDKIDLGFETPDLITKEAGKILRLLYLKELRELQDCANEAIVAAQAITANPKTDSRLGKVG 224          
BLAST of Gcaud2707.t1 vs. uniprot
Match: UPI000A2A936E (RNA transcription, translation and transport factor protein n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A936E)

HSP 1 Score: 88.6 bits (218), Expect = 1.360e-17
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 0
Query:   33 ICWLEDVYIRRYAIADRKALRKT---DYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPV---DPWQSRRLPVVPGIST----SPIVSTAIDSLREALQLPD-------AEGVDSADVAAAAADAVEVLTRDPLTFDTEQN----IDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            + WLED  IR Y I DR+ALR     ++  AL  YL  L+ P+ +        ++LL  AI L Y DNA  +N+P     P  S +  V   +      +P +   + SL   L LP+        + + +   +  + + ++   +       E +    +    +  +T D  V  A  +LRLL++  LR LQ +IN+ I  +QSITA P TD +LG+VGR
Sbjct:   29 VVWLEDQKIRLYKIEDREALRDVKNENWSKALTKYLADLECPLKSKQKS-SVLDWLLAHAIRLEYADNAQTYNSPAKESQPLASDKXDVSEELLNLTVDNPDLKAGVSSLARLLNLPEHHDHYVLLQAIQALVESRLSKEGIQESQQKXXXXXXEPSDIISLRTSDLGFDTGDSAVNEAAKILRLLHISELRDLQTKINEAIVRVQSITANPKTDQRLGQVGR 250          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A7D9E4V7_PARCT (UPF0568 C14orf166 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9E4V7_PARCT)

HSP 1 Score: 87.8 bits (216), Expect = 2.590e-17
Identity = 74/251 (29.48%), Postives = 108/251 (43.03%), Query Frame = 0
Query:   11 RLKAL--QCPVPPNPADALLVQKQICWLEDVYIRRYAIADRKALRKT---DYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRL---------PVVPGISTS-PIVSTAIDSLREALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQN-------------IDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVG 233
            +LKAL    P   +  D       + WLED+ IR Y I DR ALR T   D+      Y++ LD PV          ++LL  A+ L Y D A+  N   +  ++++            +  +    P +   I SL   L++P+ E             A++ L  + LT + + N               ++ +  +T D  V  A  +LRLL+V  LR LQ  I   I  +QS TA P TD KLGKVG
Sbjct:    5 KLKALGHHSPSSFDVNDKKQFSSLVVWLEDIKIRLYPINDRTALRDTENKDWPDVFKQYMKDLDCPVNPERKE-QVLDWLLGYAVRLEYSDKASQINKTWEEQKAKKQLEQNATEAEETIRNLKADDPNLKAGIMSLANLLKIPEHEDP------LLRLHALKALIENKLTAEVQANASSQKKSEIDLKFFQNMKLGFDTGDSAVNEAAKILRLLHVSELRELQTSITQAIVAVQSHTANPKTDTKLGKVG 248          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A6P8ZZE7_THRPL (RNA transcription, translation and transport factor protein isoform X1 n=3 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZZE7_THRPL)

HSP 1 Score: 87.0 bits (214), Expect = 5.940e-17
Identity = 70/245 (28.57%), Postives = 113/245 (46.12%), Query Frame = 0
Query:    8 IELRLKALQCPVPPNPADALLVQKQICWLEDVYIRRYAIADRKALRKT--DYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPGI-STSPIVSTAIDSL---REALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQN------------IDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            I     +L+C V  + +D   ++  + WLE+  IRRY I +R  L+     +R+  + Y R L +P+   A   +   +L+  AI+L Y DNA  +        S+ +  VP + S++P+ +   +S    +  + L     +           AV  + R+ L  D   N              +  +  +  D  +  A  +LRLLY+  LR LQ  IN+ I  +QSITA+P TD KLG+VGR
Sbjct:   16 ISFHCSSLRCYVTSSTSDEREIKNLVLWLENQKIRRYKIEERGPLQAEGEQWRANFDKYCRDLASPIVDGAMA-EKLEWLIGYAISLEYADNAEKYRGQTAQNISQTIVNVPKVESSNPLDNLDFESSDFKKGVIALAQILNITPHPDHLVTLKAVSKVVRERLNQDALDNPSNIIVKGKPFPFQEADLGFDMGDYVLNEAAKILRLLYIHDLRNLQTHINETIVAVQSITADPKTDTKLGQVGR 259          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A0L7KUX5_9NEOP (Uncharacterized protein n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7KUX5_9NEOP)

HSP 1 Score: 85.1 bits (209), Expect = 1.690e-16
Identity = 75/232 (32.33%), Postives = 119/232 (51.29%), Query Frame = 0
Query:    9 ELRLKALQCPVPP--NPADALLVQKQICWLEDVYIRRYAIADRKALRKTD---YRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALF-NTPVDPWQSRRLPVVPGISTSPIVSTAIDSLREALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            +++L++L  P P   N  D    +  + WLED  IR Y I +R+ LR  D   ++ + NAY R L +P  A  SP +  N+LL  A+ L Y DN   + N  V+  Q ++ P V  IST+P+     D+L  +     A GV+     A  +   +   R        +     P    +E   +++ + VL+LL++  LR LQ +IN+ +  +Q++TA+P TD KLG+VGR
Sbjct:    6 QIKLQSLGHPNPESFNCEDEKEYKSVVLWLEDQKIRHYKIEEREGLRNFDSDGWKESYNAYQRDLVSPA-AELSPNEQLNWLLSYAVRLEYADNVDKYKNAKVE--QPKQAPNV--ISTNPL-----DNLDFSCTTFKA-GVERVSTIAGISPHPDPKIRLAALCKILKTAPH-PDPPSSESVAIQQPSDVLKLLFIEDLRDLQTKINESLVAVQTVTADPRTDTKLGQVGR 225          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A813E9G3_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E9G3_POLGL)

HSP 1 Score: 85.5 bits (210), Expect = 2.800e-16
Identity = 69/220 (31.36%), Postives = 112/220 (50.91%), Query Frame = 0
Query:   31 KQICWLEDVYIRRYAIADRKALRKTD--YRSALNAYLRLLDAPVTAYAS---PIDAR--NFLLDVAINLHYDDNAALFNTPVDPWQS---------RRLPVVPGISTSPIVSTAIDSLREALQLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            K + WLE+  IR Y   DRK LR  +  + +A+ +Y + L  P    +    P+  R  N L+++A++  Y D        +   Q          R   ++PG++   + S ++  L+E       + VD+  +AA     V V    P +   + ++  LP+ LE +D +VR+A  VLRLL+   L+ LQ  IN +I+E+Q +TA P TDA+LG+VGR
Sbjct:   64 KIVLWLEEEKIRLYEKIDRKPLRDFNKAWYTAVTSYAKDLGVPAEGLSEQDFPVKLRVLNGLVNIAVHDIYRDKVEANELSLAAPQKQAGSGGPKQRLAALLPGLNQL-MASFSLPLLQE-------DAVDADTLAALRCVHVRVCAS-PDSEAGQLDLSKLPLGLEVKDPEVRQAVAVLRLLHGSELQQLQMHINHVINELQQLTANPQTDARLGRVGR 274          
BLAST of Gcaud2707.t1 vs. uniprot
Match: A0A8B7PMG3_HYAAZ (UPF0568 protein C14orf166 homolog isoform X1 n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7PMG3_HYAAZ)

HSP 1 Score: 84.7 bits (208), Expect = 3.560e-16
Identity = 73/245 (29.80%), Postives = 116/245 (47.35%), Query Frame = 0
Query:   11 RLKALQCPVPP--NPADALLVQKQICWLEDVYIRRYAIADRKALRKTD---YRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAALFNTPVDPWQSRRLPVVPGI-STSPI--VSTAIDSLREAL-QLPDAEGVDSADVAAAAADAVEVLTRDPLTFDTEQN------------IDDLPIALETEDKQVRRATCVLRLLYVRRLRALQDEINDIISEMQSITAEPSTDAKLGKVGR 234
            +LKAL  P P   N  D   +++ + WLED  IR Y I DR AL++T    + +    YL  L  P    A      ++LL +A+ L Y +N   ++       + +    P + +T+P+  +  +    R+ + +L +   + +         AV  L +  L+ +   +            I D  +  E  DK++  A  VLRLLY++ LR LQ  IN+ I   Q+ITA P TD++LGKVGR
Sbjct:    5 KLKALLHPDPDHFNIKDDQSIRQLVVWLEDHKIRHYKIEDRTALKQTKDEKWPNVFKKYLNDLKCPHPPQALH-SVTDWLLGLAVQLEYGENVEKYSAQKAAHVASQRSAAPQVVNTNPLDALDFSCPEFRDGVNKLAEILNIQAHPDHLVTLKAVSHLVKTRLSQEALASPGEVIHQGKAYPIFDADLGFEMGDKRLNDAGKVLRLLYIQDLRKLQTSINECIVATQTITANPKTDSRLGKVGR 248          
The following BLAST results are available for this feature:
BLAST of Gcaud2707.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPT0_9FLOR2.120e-8355.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4XVR1_9CHLO9.130e-2332.54Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
R7VLV1_CAPTE1.530e-2033.88Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
T1ERB6_HELRO8.500e-1832.86Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
UPI000A2A936E1.360e-1730.49RNA transcription, translation and transport facto... [more]
A0A7D9E4V7_PARCT2.590e-1729.48UPF0568 C14orf166 homolog n=1 Tax=Paramuricea clav... [more]
A0A6P8ZZE7_THRPL5.940e-1728.57RNA transcription, translation and transport facto... [more]
A0A0L7KUX5_9NEOP1.690e-1632.33Uncharacterized protein n=1 Tax=Operophtera brumat... [more]
A0A813E9G3_POLGL2.800e-1631.36Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A8B7PMG3_HYAAZ3.560e-1629.80UPF0568 protein C14orf166 homolog isoform X1 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availablePANTHERPTHR15924:SF9RNA TRANSCRIPTION, TRANSLATION AND TRANSPORT FACTOR PROTEINcoord: 11..234
IPR019265RNA transcription, translation and transport factor proteinPFAMPF10036RLLcoord: 9..234
e-value: 7.2E-37
score: 127.6
IPR019265RNA transcription, translation and transport factor proteinPANTHERPTHR15924CLEcoord: 11..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_12_length_86746_cov_4.301944contigNODE_12_length_86746_cov_4.301944:64147..64907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2707.t1Gcaud2707.t1Gracilaria caudata M_176_S67 malemRNANODE_12_length_86746_cov_4.301944 64147..64907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2707.t1 ID=Gcaud2707.t1|Name=Gcaud2707.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=235bp
MNCSEPAIELRLKALQCPVPPNPADALLVQKQICWLEDVYIRRYAIADRK
ALRKTDYRSALNAYLRLLDAPVTAYASPIDARNFLLDVAINLHYDDNAAL
FNTPVDPWQSRRLPVVPGISTSPIVSTAIDSLREALQLPDAEGVDSADVA
AAAADAVEVLTRDPLTFDTEQNIDDLPIALETEDKQVRRATCVLRLLYVR
RLRALQDEINDIISEMQSITAEPSTDAKLGKVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019265RTRAF