Gcaud3554.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3554.t1
Unique NameGcaud3554.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length170
Homology
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BLAST of Gcaud3554.t1 vs. uniprot
Match: A0A2V3J158_9FLOR (Protein neuralized n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J158_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 2.330e-40
Identity = 87/147 (59.18%), Postives = 101/147 (68.71%), Query Frame = 0 
Query:    4 SSDSPRRARPRLTEQIQVIRELWLLRESARVRAAEHRFMAQLERLFGANAYSSPPPPQPRVSFV-PVGATRVPTPPVAPPPPPLGRRSLWRNNDGGVFESQPQPRGDASPARERRPAFPEGIEVLRARQPVTNLSAQFRARLEGDDT 149
            S   PRRAR +  EQI+++RELWLLRE +RVRAAE RF+A+LERL G  AYSSPPPP   VSFV PV A              +  R+        VFES+P PRG++SP RERR A  +GIE+LRARQPVTNL AQFRARLEGDDT
Sbjct:    7 SPQPPRRARAQAGEQIRIVRELWLLRERSRVRAAERRFVAELERLLGRRAYSSPPPPLSHVSFVEPVSAVPXXXXXXXXXXX-ISARTRPTPLTPSVFESEPPPRGESSPVRERRGAAIDGIELLRARQPVTNLIAQFRARLEGDDT 152
The following BLAST results are available for this feature:
BLAST of Gcaud3554.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J158_9FLOR2.330e-4059.18Protein neuralized n=1 Tax=Gracilariopsis chorda T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_9_length_88726_cov_4.624437contigNODE_9_length_88726_cov_4.624437:4757..5548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3554.t1Gcaud3554.t1Gracilaria caudata M_176_S67 malemRNANODE_9_length_88726_cov_4.624437 4757..5548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3554.t1 ID=Gcaud3554.t1|Name=Gcaud3554.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=170bp
MSHSSDSPRRARPRLTEQIQVIRELWLLRESARVRAAEHRFMAQLERLFG
ANAYSSPPPPQPRVSFVPVGATRVPTPPVAPPPPPLGRRSLWRNNDGGVF
ESQPQPRGDASPARERRPAFPEGIEVLRARQPVTNLSAQFRARLEGDDTQ
HHPYRGISLLHWSRACNRK*
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