Gcaud2610.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2610.t1
Unique NameGcaud2610.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length226
Homology
BLAST of Gcaud2610.t1 vs. uniprot
Match: A0A2V3IT57_9FLOR (Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT57_9FLOR)

HSP 1 Score: 338 bits (866), Expect = 2.800e-115
Identity = 159/225 (70.67%), Postives = 180/225 (80.00%), Query Frame = 0
Query:    1 MRYCYLLEKLPDGTFSKPSLDNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVEHGIRRVADADANECYQTVNRPNDRFIQLSFRADLWQQCYCSFQSDDNEWTKPPGKPMAVMQREQPGRYFELVVEASRMACAFNDGGENWDSRLNKNYLIGCHGKYEVCDGSAKYISPSDKDLQATPAVETL----PVSAAANFVRASPAL 221
            MR+CYLLEKLPD +F+KPS  N+LRDASHIRDGFRVFRLPFR IEFVLTNGT RNWEDNNG+NY I  PGRYVVEHGIRRVADADANEC+QT+ RP D+FIQ+SFRADLW  CYCS+Q DD EWTK PG+ M ++     GR+FE+VVEASRMACAFNDGGENWDSRLNKNYLIGC GKY+V  G  +YISPSD DL+  P  + +    P S     V A PA+
Sbjct:   20 MRFCYLLEKLPDSSFTKPSAQNQLRDASHIRDGFRVFRLPFRPIEFVLTNGTDRNWEDNNGHNYTIQQPGRYVVEHGIRRVADADANECFQTLCRPLDKFIQISFRADLWHTCYCSYQRDDLEWTKAPGELMKLLSTPSEGRHFEIVVEASRMACAFNDGGENWDSRLNKNYLIGCPGKYQVSAGVVRYISPSDPDLKRQPLADAVEQPPPASKVVKTVTAMPAV 244          
BLAST of Gcaud2610.t1 vs. uniprot
Match: A0A7S3EKX2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKX2_9RHOD)

HSP 1 Score: 161 bits (407), Expect = 6.070e-46
Identity = 85/195 (43.59%), Postives = 118/195 (60.51%), Query Frame = 0
Query:    4 CYLLEKLPDGTFSKPSLDNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADANECYQTVNRPNDRFIQLSFRAD-LWQQCYCSFQSDDNEWTKPPGKPMAVMQREQPGRYFELVVEASRMACAFNDGGENWDSRLNKNYLIGCHGKYEVCDGSAKYISPSDKD 196
            C+++ +  DG   K +    LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G NY I+  GRY+V +  + RV DAD   C + + R NDRFI+L ++    W  C   +  DD+ W + PG+ M  ++ + P + F L  EA  M  AF DG E WDS +++NY +G  GKY V DG  KYI PS+ D
Sbjct:   28 CFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRFIELIYQPPPSWLGCSIIYSKDDDPWLEAPGEAMTRIKSKDP-QLFMLRTEAQHMTFAFFDGVEEWDSNMDENYKVGLPGKYFVRDGVCKYIGPSEMD 219          
BLAST of Gcaud2610.t1 vs. uniprot
Match: M1UQ90_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UQ90_CYAM1)

HSP 1 Score: 124 bits (311), Expect = 2.170e-31
Identity = 72/192 (37.50%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   12 DGTFSKPSLDNRLRDASHIRDGFRVFRLP-FRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVE-HGIRRVADADANECYQTVNRPNDRFIQLSFRADL-WQQCYCSFQSDDN---EWTKPPGKPMAVMQREQPGRYFELVVEASRMACAFNDGGENWDSRLNKNYLIGCHGKYEVCDGSAKYISPSDKDL 197
            DG    P+   R  DASHIR+GFRVFR+   +R+EF +T+G  R W++N G NYVI  PGRYVV   G++R  D D +E  +   +  D++I++ +RA   W Q Y  +    N   +WT  PG+ M     EQ   +  L+  A  +    N+GGE +D+   KN+     G+Y V     KY+  S++DL
Sbjct:   45 DGGKWTPNRTYRFEDASHIREGFRVFRVSGCKRLEFAITDGK-RYWDNNGGQNYVITEPGRYVVSIRGLQRRGDVDMDEIRRQQTKATDQYIEILYRAPADWSQVYIMYAKQLNAKADWTSAPGELMLRNPEEQNLYFIRLL--AKELEFVLNNGGEEYDNCKGKNFKCHTPGRYLVQHEDCKYLGRSERDL 233          
BLAST of Gcaud2610.t1 vs. uniprot
Match: A0A7J7ICQ2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICQ2_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 1.810e-30
Identity = 71/192 (36.98%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   12 DGTFSKPSLDNRLRDASHIRDGFRVFRLP-FRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVE-HGIRRVADADANECYQTVNRPNDRFIQLSFRADL-WQQCYCSFQSDDNE---WTKPPGKPMAVMQREQPGRYFELVVEASRMACAFNDGGENWDSRLNKNYLIGCHGKYEVCDGSAKYISPSDKDL 197
            DG    P+  ++  DASHIR+GFRVFR+   +R+EF +T+G  R W+DN G NYVI  PGRYVV  +G+ R  D D  E ++   +  D++I++ +R+   WQ+ +  +    N    WT  PG+PM +   E+ G +F  ++ A  +   F DG   +D+R  KNY     G+Y V     +Y+  S +DL
Sbjct:   48 DGGPWTPNRTHKFEDASHIREGFRVFRVGGCKRLEFAITDGK-RYWDDNGGQNYVITEPGRYVVSINGLERRGDVDIEEIHRQQTKTVDQYIEILYRSPPGWQRAHILYAKQLNAQGGWTPSPGEPM-LRNPEESGLFFIRLL-AKELEFVFTDGENAYDNRKGKNYKCHTPGRYIVQYEQCQYLGRSQRDL 236          
BLAST of Gcaud2610.t1 vs. uniprot
Match: A0A7S0BE94_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE94_9RHOD)

HSP 1 Score: 103 bits (256), Expect = 3.430e-24
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    4 CYLLEKLPDGTFSKPSLDNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADANECYQTVNRPNDRFIQLSFRA-DLWQQCYCSFQSDDNEWTKPPGKPM 132
            C+++ +  DG   K +    LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G NY+++  GRY+V +  + RV DAD   C + + R +DRFI+L ++    W  C   +  D+  W + PG+ M
Sbjct:   28 CFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKAWTLEFYLTNGSSRNWENNSGKNYLVEESGRYLVSYKSMSRVGDADIGSCIRAMRR-HDRFIELIYQPPSSWLGCSIIYSKDNEPWLEAPGEAM 156          
BLAST of Gcaud2610.t1 vs. uniprot
Match: A0A7S3A1A4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1A4_9RHOD)

HSP 1 Score: 85.5 bits (210), Expect = 1.010e-17
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    4 CYLLEKLPDGTFSKPSLDNRLRDASHIRDGFRVFRLPFRRIEFVLTNGTLRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADANECYQTVNRPNDRF 100
            C+++ +  DG   K +    LRDAS I+ GFRVFR+    +EF LTNG+ RNWE+N+G NY I+  GRY+V +  + RV DAD   C + + R NDR+
Sbjct:   28 CFIVFR-KDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRY 123          
The following BLAST results are available for this feature:
BLAST of Gcaud2610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IT57_9FLOR2.800e-11570.67Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S3EKX2_9RHOD6.070e-4643.59Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1UQ90_CYAM12.170e-3137.50Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7ICQ2_9RHOD1.810e-3036.98Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0BE94_9RHOD3.430e-2440.46Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3A1A4_9RHOD1.010e-1745.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 21..86
e-value: 4.0E-5
score: 25.9
coord: 97..194
e-value: 9.2E-15
score: 56.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_972_length_15628_cov_3.908026contigNODE_972_length_15628_cov_3.908026:878..1555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2610.t1Gcaud2610.t1Gracilaria caudata M_176_S67 malemRNANODE_972_length_15628_cov_3.908026 878..1555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2610.t1 ID=Gcaud2610.t1|Name=Gcaud2610.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=226bp
MRYCYLLEKLPDGTFSKPSLDNRLRDASHIRDGFRVFRLPFRRIEFVLTN
GTLRNWEDNNGNNYVIDVPGRYVVEHGIRRVADADANECYQTVNRPNDRF
IQLSFRADLWQQCYCSFQSDDNEWTKPPGKPMAVMQREQPGRYFELVVEA
SRMACAFNDGGENWDSRLNKNYLIGCHGKYEVCDGSAKYISPSDKDLQAT
PAVETLPVSAAANFVRASPALPEVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold