Gcaud1640.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1640.t1
Unique NameGcaud1640.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length271
Homology
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BLAST of Gcaud1640.t1 vs. uniprot
Match: A0A2V3J212_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J212_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 3.420e-88
Identity = 151/273 (55.31%), Postives = 187/273 (68.50%), Query Frame = 0 
Query:    1 MRAFPHFRVFIQRLDGQIEPFQIPLLCVADPPTLDDLRTSLEQSALGDVERDIFFPNWTKSLHVVQSQLLSKQNVPSWHSIEQHKQTIDTPDKLRSILDNEESSPGTTAIVVQQCRSKRYSRKKEEPVASLVVNCNANAAVSAHNSLKSPSPQQNEHKVLIVASNSXXXXXXXXXXXXXXXXXXATNGTRNNSNLTYGVALNRVSE-AYDSGAMLYVEQPQAYFAPMGMVPPPPPTAVYQPCYSYAPLNV-AAYNYMGAPSFITA-YQPFYTY 270
            MRA+P FRVFI+RLD QIEPF IPLLCVADPPTL+DLR  LE S LGDVE+DIFFPNWTKSLHVVQ++LLS + +PSW +IE +KQTIDTP+KLRSILDNEE+SPGTTAI+VQQCRSKRYSRKK+E ++S   +    + V   N+    SP+Q                              + N T   +NLTY + +N +S+ AY++  M ++EQP  Y+  +GMVP P P  VYQPCY+Y P NV A YNY+ APSF+   YQ F+TY
Sbjct:    1 MRAYPGFRVFIKRLDAQIEPFHIPLLCVADPPTLEDLRARLEDSPLGDVEKDIFFPNWTKSLHVVQTKLLSAEKLPSWDTIEANKQTIDTPEKLRSILDNEEASPGTTAIIVQQCRSKRYSRKKDESISSSDSDTKPPSDVVKRNT---SSPRQRSPS--------------------------SVNPT---NNLTYALPVNCISDLAYENRPMFFMEQP--YYPAVGMVPQPHPAPVYQPCYTYPPFNVPACYNYITAPSFVQPPYQTFHTY 239
The following BLAST results are available for this feature:
BLAST of Gcaud1640.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J212_9FLOR3.420e-8855.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_875_length_16715_cov_4.214690contigNODE_875_length_16715_cov_4.214690:8484..9296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1640.t1Gcaud1640.t1Gracilaria caudata M_176_S67 malemRNANODE_875_length_16715_cov_4.214690 8484..9296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1640.t1 ID=Gcaud1640.t1|Name=Gcaud1640.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=271bp
MRAFPHFRVFIQRLDGQIEPFQIPLLCVADPPTLDDLRTSLEQSALGDVE
RDIFFPNWTKSLHVVQSQLLSKQNVPSWHSIEQHKQTIDTPDKLRSILDN
EESSPGTTAIVVQQCRSKRYSRKKEEPVASLVVNCNANAAVSAHNSLKSP
SPQQNEHKVLIVASNSTSNSNSNSNPNSNSNSNSATNGTRNNSNLTYGVA
LNRVSEAYDSGAMLYVEQPQAYFAPMGMVPPPPPTAVYQPCYSYAPLNVA
AYNYMGAPSFITAYQPFYTY*
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