Gcaud1699.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1699.t1
Unique NameGcaud1699.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length341
Homology
BLAST of Gcaud1699.t1 vs. uniprot
Match: A0A2V3J456_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J456_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 3.580e-21
Identity = 53/139 (38.13%), Postives = 84/139 (60.43%), Query Frame = 0
Query:   22 MQYIYSFLLRKTVPELRKICKPFNLKVHNRRQDELVAQIVLFFHVKSLDDVSIRDCISLNEELKSFFPWEKQAIDSRSSLTPLPDVGDFLSMVREKDRRVYEKQIVSYKFQSEESRWAVSGQ-----NDPGNISSFLRR 155
            M ++YSF+L KTV +LR I K F L++ NR + EL++ ++L+F  KS +D SI DC+S N+ELK+F   +K  +  R++L+ LP+V  F +MV   D ++  K I+ YK +   S + ++       NDP  I +   R
Sbjct:    1 MPFLYSFVLEKTVKDLRAISKSFKLRIRNRIRAELLSGLLLYFPTKSFEDTSIGDCLSNNDELKAFLQSKKDEVIRRATLSTLPEVRAFDNMVHFTDHKLVMKLILDYKAEDPGSGFPLTAHSQVEHNDPSFIINEFAR 139          
BLAST of Gcaud1699.t1 vs. uniprot
Match: A0A2V3IQP4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQP4_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 2.760e-20
Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   22 MQYIYSFLLRKTVPELRKICKPFNLKVHNRRQDELVAQIVLFFHVKSLDDVSIRDCISLNEELKSFFPWEKQAIDSRSSLTPLPDVGDFLSMVREKDRRVYEKQIVSYKFQSEESRWAVSGQ-----NDPGNI 149
            M  +YSFLL KTV  LR I K F L++ +R + EL+++++L+FH+K  +D SI   +S N+ELK+F   EK A++  + L+ LP V DF++M+   +R V  K+IV YK     S   ++G      NDP  I
Sbjct:    1 MAALYSFLLEKTVKNLRAISKLFKLQIRDRTRFELLSRLLLYFHIKRFEDTSIALFLSTNDELKNFLEGEKDAVNRHARLSNLPKVADFVNMLHFTERIVLRKRIVDYKAADIVSVLMLTGHKEAKCNDPSFI 133          
BLAST of Gcaud1699.t1 vs. uniprot
Match: A0A2V3IK18_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK18_9FLOR)

HSP 1 Score: 67.4 bits (163), Expect = 7.380e-10
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   66 VKSLDDVSIRDCISLNEELKSFFPWEKQAIDSRSSLTPLPDVGDFLSMVREKDRRVYEKQIVSYKFQSEESRWAVSGQNDPGNISSF 152
            +KS DD+SIRDC+S NE L  F  WEK A +SR++L+ LP+V  F++M+   DR    K   +Y+   +      +   +P  + SF
Sbjct:    1 MKSFDDISIRDCVSTNEHLSRFEEWEKDAKESRATLSRLPEVAAFINMLHRTDRAPVMKFSTNYQKAEKCGFPLTANPEEPDGVPSF 87          
The following BLAST results are available for this feature:
BLAST of Gcaud1699.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J456_9FLOR3.580e-2138.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQP4_9FLOR2.760e-2040.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK18_9FLOR7.380e-1037.93Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_852_length_17021_cov_7.154341contigNODE_852_length_17021_cov_7.154341:4486..5865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1699.t1Gcaud1699.t1Gracilaria caudata M_176_S67 malemRNANODE_852_length_17021_cov_7.154341 4486..5865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1699.t1 ID=Gcaud1699.t1|Name=Gcaud1699.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=341bp
MPSSSDITVCPYSKPPFREDRMQYIYSFLLRKTVPELRKICKPFNLKVHN
RRQDELVAQIVLFFHVKSLDDVSIRDCISLNEELKSFFPWEKQAIDSRSS
LTPLPDVGDFLSMVREKDRRVYEKQIVSYKFQSEESRWAVSGQNDPGNIS
SFLRRTPGGSDLTADSKRAYIFFIVARTGTPNEAEHLFITASKLIEEDEG
GVEEGCLGGKEHSEAFSSRRRSGSGARNSGSHRDNELSKEVSESNQISRE
QTAIMRAHLELAQKKAEGPVKSSEEVELNGCENRMKLVAYLADSSAQLKR
VRDLHDREVVEVLQDNHTLLLKKFKRMVEKEKTRDFDEEP*
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