Gcaud1701.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1701.t1
Unique NameGcaud1701.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length158
Homology
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BLAST of Gcaud1701.t1 vs. uniprot
Match: A0A2V3J4Q2_9FLOR (Structural maintenance of chromosomes protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q2_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 1.760e-57
Identity = 100/157 (63.69%), Postives = 126/157 (80.25%), Query Frame = 0 
Query:    1 MDIEHDAVFNALIDMAQIEKMVLSTEEDVKKLAWKRIPNVHTVWNKLADRAYIRNGSNTFRHAPDGVCSRYLTKDVEPYLAALEEEVRLAGEEKQRSEDVLADRSNELRGLLSTLEATVRELKKRKIELRNIQRKKNLIEDQLNHAEHAFNPEPFER 157
            M++ +DAVFNAL+DMA++EK VLS+E+DVK+LAWKR+PNVH VWNK  DRAYIRNGSNTFRHAP  VC+RYL+KD+ PYLAALEE+V+ A +EK++ E+ LA RS EL  LL  +     ++   K EL  + RKKN IEDQLN+AE+AF+PEPFER
Sbjct:  691 MEVRNDAVFNALVDMAKVEKNVLSSEDDVKRLAWKRVPNVHMVWNKHGDRAYIRNGSNTFRHAPQNVCARYLSKDMGPYLAALEEQVKQADQEKRKCEENLAARSRELNDLLKEVTRVQTDIHNSKTELTELHRKKNTIEDQLNYAENAFDPEPFER 847
The following BLAST results are available for this feature:
BLAST of Gcaud1701.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4Q2_9FLOR1.760e-5763.69Structural maintenance of chromosomes protein 6 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableCOILSCoilCoilcoord: 105..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_852_length_17021_cov_7.154341contigNODE_852_length_17021_cov_7.154341:10316..10789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1701.t1Gcaud1701.t1Gracilaria caudata M_176_S67 malemRNANODE_852_length_17021_cov_7.154341 10316..10789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1701.t1 ID=Gcaud1701.t1|Name=Gcaud1701.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=158bp
MDIEHDAVFNALIDMAQIEKMVLSTEEDVKKLAWKRIPNVHTVWNKLADR
AYIRNGSNTFRHAPDGVCSRYLTKDVEPYLAALEEEVRLAGEEKQRSEDV
LADRSNELRGLLSTLEATVRELKKRKIELRNIQRKKNLIEDQLNHAEHAF
NPEPFER*
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