Gcaud2826.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2826.t1
Unique NameGcaud2826.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length116
Homology
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A2V3J4V0_9FLOR (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V0_9FLOR)

HSP 1 Score: 179 bits (455), Expect = 1.900e-56
Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    1 MLSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEIKNIATQL 115
            MLSVH+REAERRKNELK +L AGA+ VQ+AA++LSD LLKVINEDVQE+Y AERQIE+ELRNIERLLSSNGYQIHQWTTLLDRLT ELKELGDVSNW  ++E+SA+EI++I+ QL
Sbjct:    1 MLSVHLREAERRKNELKPALEAGAKAVQEAAANLSDELLKVINEDVQEIYMAERQIESELRNIERLLSSNGYQIHQWTTLLDRLTSELKELGDVSNWAAIMEKSADEIRDISKQL 115          
BLAST of Gcaud2826.t1 vs. uniprot
Match: R7QBT4_CHOCR (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBT4_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 4.720e-34
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    1 MLSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEIKNIATQL 115
            ML+VH++EAE+ K +L+  L  G + V +AA   SD LL  INEDV   Y A+RQIE ELRN+ERLL +N  Q  QW TLLDRLT+ELKELGDVSNW+E LE +A EI  I+  L
Sbjct:    1 MLAVHLKEAEKAKQKLRPQLLQGERNVIRAAEKYSDILLTTINEDVSCAYVAQRQIELELRNVERLLVANANQNAQWMTLLDRLTRELKELGDVSNWLEHLEAAATEINEISKSL 115          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A1Y1YYF7_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1YYF7_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 7.290e-10
Identity = 27/73 (36.99%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   31 ASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQ 103
            AS+L+D ++  IN D+  +++ E+++ETE   ++ L+  +   + QW  L   L   LKELGDV NWV+++E+
Sbjct:   31 ASELNDIIVDEINSDISILFKNEKKLETESNKLQSLIKQHSKDVLQWNDLTKMLDNSLKELGDVQNWVDLIER 103          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A1Y1V8V0_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V8V0_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 2.470e-9
Identity = 27/73 (36.99%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   31 ASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQ 103
            +S+L+D ++  IN D+  +++ E++IE E   ++ L+  +   I QW  L   L   LKELGDV NW+E++E+
Sbjct:   31 SSELNDIIVDEINSDISVLFKNEKKIEIESNKLQSLIIQHSKDILQWNDLTKMLDNSLKELGDVENWIELIER 103          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A422P256_TRYRA (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A422P256_TRYRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.330e-9
Identity = 35/110 (31.82%), Postives = 58/110 (52.73%), Query Frame = 0
Query:    6 IREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEIKNIATQL 115
            +R    R  EL+ +     + V++      DA++   N +V   +  E++IETEL+ +    +    Q+  WTTL  +L  ELKE+GDVSNWV  +E+   E  ++  +L
Sbjct:  112 VRARNERWAELRAAGRRAWEEVKQHTQAACDAVVSGANAEVLAAFAREKKIETELKAVAACSAQLQMQMSAWTTLFGKLNTELKEMGDVSNWVRSIEEDLAETVHVLEEL 221          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A367J695_RHIST (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J695_RHIST)

HSP 1 Score: 58.9 bits (141), Expect = 9.510e-9
Identity = 31/114 (27.19%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    2 LSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEIKNIATQL 115
            LS  ++  + ++ ELK++     +   +A  +L+D +   +NE V +++  ++ +E + R +            QW +L+D     LKELGDV NW +++E   N++K I + L
Sbjct:    5 LSQLVKAHQEKRTELKKNNEQIRKNAMQATHELTDTVNNYMNEGVNDIFIKQKDLEQQSRKLATQTXXXXXXXQQWLSLVDNFNNSLKELGDVKNWAQIME---NDMKTIMSTL 115          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A8H7PWJ5_MORIS (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PWJ5_MORIS)

HSP 1 Score: 58.9 bits (141), Expect = 1.060e-8
Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 0
Query:    1 MLSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINED----VQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEIKNIATQL 115
            +L VH    ++++ ++K+      +   KAASDL++ L   INE     + E++  ++ IE E R +    +    Q  QW   +D     LKELGDV NW EV+E   N+++ +   L
Sbjct:   13 LLKVH----QKKQTDIKRQNGQLCKDASKAASDLNETLTTNINERLVFRISEIFVRQKDIEQESRKLSNQTARYTRQTKQWIQTIDNFNGALKELGDVQNWAEVME---NDMRGVMATL 124          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A1Y2GL38_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GL38_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 1.260e-8
Identity = 30/106 (28.30%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    3 SVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEI 108
            + H RE E+ + E  QS+              SDA+  ++N  V +++  ++ +E E++N+    +    Q  QW +L+ +    LKELGDV NWV+V+++   ++
Sbjct:   15 ATHKRETEQLRKEAIQSVGV-----------FSDAIADILNSRVTQIFVNQKNLEQEVKNLSAQTTRYAKQTAQWLSLVQQFDSALKELGDVQNWVQVIQRDMEQV 109          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A1Y1XZ52_9FUNG (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XZ52_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 2.340e-8
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   29 KAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLEQSANEI 108
            K+ +DL+D L   +NE V +VY  ++++E   + I         Q   W  L+D+    LKELGDV NW EV+EQ   ++
Sbjct:  257 KSLNDLTDCLSDNLNERVAQVYTNQKELEQSAKKISLQAHKYSKQAKNWLQLIDQFNSALKELGDVQNWAEVIEQDMRDV 336          
BLAST of Gcaud2826.t1 vs. uniprot
Match: A0A7D9IS43_PARCT (Biogenesis of lysosome-related organelles complex 1 subunit 1 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9IS43_PARCT)

HSP 1 Score: 57.8 bits (138), Expect = 2.340e-8
Identity = 30/102 (29.41%), Postives = 57/102 (55.88%), Query Frame = 0
Query:    1 MLSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVYQAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEVLE 102
            MLS   +E   +K  +++      +   ++A+ + D L+  +N+ V++VYQ ++++E E + ++   +    Q  QW  L +   + LKELGDV NW +V+E
Sbjct:    1 MLSRAQKEHHAQKQRIREQQELKRREAFESANAVVDKLVSTLNDGVEDVYQNQKKLEAESKQLQAHAAQFSKQTIQWLQLTEGFNRALKELGDVENWSQVIE 102          
The following BLAST results are available for this feature:
BLAST of Gcaud2826.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4V0_9FLOR1.900e-5679.13Biogenesis of lysosome-related organelles complex ... [more]
R7QBT4_CHOCR4.720e-3458.26Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y1YYF7_9FUNG7.290e-1036.99Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y1V8V0_9FUNG2.470e-936.99Biogenesis of lysosome-related organelles complex ... [more]
A0A422P256_TRYRA8.330e-931.82Biogenesis of lysosome-related organelles complex ... [more]
A0A367J695_RHIST9.510e-927.19Biogenesis of lysosome-related organelles complex ... [more]
A0A8H7PWJ5_MORIS1.060e-831.09Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y2GL38_9FUNG1.260e-828.30Biogenesis of lysosome-related organelles complex ... [more]
A0A1Y1XZ52_9FUNG2.340e-836.25Biogenesis of lysosome-related organelles complex ... [more]
A0A7D9IS43_PARCT2.340e-829.41Biogenesis of lysosome-related organelles complex ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
IPR009395Biogenesis of lysosome-related organelles complex 1 subunit 1PFAMPF06320GCN5L1coord: 6..110
e-value: 5.7E-20
score: 71.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_7_length_102599_cov_4.541909contigNODE_7_length_102599_cov_4.541909:13356..13846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2826.t1Gcaud2826.t1Gracilaria caudata M_176_S67 malemRNANODE_7_length_102599_cov_4.541909 13356..13846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2826.t1 ID=Gcaud2826.t1|Name=Gcaud2826.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=116bp
MLSVHIREAERRKNELKQSLSAGAQTVQKAASDLSDALLKVINEDVQEVY
QAERQIETELRNIERLLSSNGYQIHQWTTLLDRLTKELKELGDVSNWVEV
LEQSANEIKNIATQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009395BLOC1S1