Gcaud2095.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2095.t1
Unique NameGcaud2095.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length151
Homology
[Close]
BLAST of Gcaud2095.t1 vs. uniprot
Match: A0A2V3J0X4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0X4_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 1.070e-38
Identity = 72/119 (60.50%), Postives = 89/119 (74.79%), Query Frame = 0 
Query:    8 FRRLVFRQFCQKPELTPGILSFSKKAKQLREWARNGVIHSDMSKRPPWTRQLELQRKELNKRKEKILKEQQTLNSFYKELGFDTLPRNHELPREWEQKIGRLRKAAEKIKQKQQLRSKK 126
            F R+  R F      TP I +F+KKAK LREWAR+GV   +    P  +RQLE QR ELNKR +KI+ +Q+ LN+FYK+LGF+TLPRNHELPREW++KI RLR AA+KIKQKQQ RS+K
Sbjct:    8 FNRVTARYFSDNAAATPSIQTFTKKAKMLREWARHGVFTGEADNSPQRSRQLERQRHELNKRTDKIVHDQKLLNAFYKDLGFETLPRNHELPREWDRKIARLRHAADKIKQKQQARSRK 126
The following BLAST results are available for this feature:
BLAST of Gcaud2095.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0X4_9FLOR1.070e-3860.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_781_length_18128_cov_4.694018contigNODE_781_length_18128_cov_4.694018:14562..15014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2095.t1Gcaud2095.t1Gracilaria caudata M_176_S67 malemRNANODE_781_length_18128_cov_4.694018 14562..15014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2095.t1 ID=Gcaud2095.t1|Name=Gcaud2095.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=151bp
MVISTSPFRRLVFRQFCQKPELTPGILSFSKKAKQLREWARNGVIHSDMS
KRPPWTRQLELQRKELNKRKEKILKEQQTLNSFYKELGFDTLPRNHELPR
EWEQKIGRLRKAAEKIKQKQQLRSKKAPGNAKSAEETKPLPTALGQPDVT
*
back to top