Gcaud2501.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2501.t1
Unique NameGcaud2501.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length123
Homology
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BLAST of Gcaud2501.t1 vs. uniprot
Match: A0A2V3J2Q0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Q0_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 6.330e-24
Identity = 62/142 (43.66%), Postives = 97/142 (68.31%), Query Frame = 0 
Query:    1 MKYGVFVNVGVERDGLIYFSRMPEKHRTDWKEFEKGIEVCVEVTDIIDDQIALALVDVADEMLKEALE------------MISKD------QSKAEAQQNEIVAQRSSEE---EDLVGKTAENEDFEEI-EKFSDEYFEDEY 120
            +KYGVFV++GV+R+GLI++SRM ++H+ DWKEFE G+E+ VEV DI+DD+++L+LV+V DE+L E  +            + +K+      +SK++ +  +  + R+ E+   ED   K  ENED E++ EKFSDEY+ED+Y
Sbjct:  288 LKYGVFVDIGVKREGLIHYSRMTDRHKWDWKEFEAGLELYVEVHDIVDDRLSLSLVEVKDEILSEVTDRAKSATARVHDVLKAKELKSLLRRSKSKLKSKKQASSRTGEDVSKEDESRKALENEDEEDVVEKFSDEYYEDKY 429
The following BLAST results are available for this feature:
BLAST of Gcaud2501.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2Q0_9FLOR6.330e-2443.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableGENE3D2.40.50.140coord: 1..62
e-value: 1.8E-5
score: 26.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..103
IPR003029S1 domainPROSITEPS50126S1coord: 1..56
score: 8.546852

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_6549_length_1148_cov_9.122044contigNODE_6549_length_1148_cov_9.122044:528..966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2501.t1Gcaud2501.t1Gracilaria caudata M_176_S67 malemRNANODE_6549_length_1148_cov_9.122044 528..966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2501.t1 ID=Gcaud2501.t1|Name=Gcaud2501.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=123bp
MKYGVFVNVGVERDGLIYFSRMPEKHRTDWKEFEKGIEVCVEVTDIIDDQ
IALALVDVADEMLKEALEMISKDQSKAEAQQNEIVAQRSSEEEDLVGKTA
ENEDFEEIEKFSDEYFEDEYDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain