Gcaud8736.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8736.t1
Unique Name	Gcaud8736.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	352

Homology

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BLAST of Gcaud8736.t1 vs. uniprot
Match: A0A2V3J5N4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N4_9FLOR)

HSP 1 Score: 192 bits (488), Expect = 5.380e-56
Identity = 96/221 (43.44%), Postives = 135/221 (61.09%), Query Frame = 0

Query:  136 MTCRTSECKAVIRFNRLQSSGLWRLQRFVKHKNECFGRGTES-----TNDQSSVFCTPAYTAKQIARVVLPELHDHPDISTKLIGSIIRAKGIYTRQPSVRHFRAVKRELNIIMERTRLEDMAGLEGYAELLRDVGHTVQIYTCDAADMREIRLKAARFIFKQFQKSGVIGKDEKFDKGVVDLSDIVDGKSYYSGFVFVPSVAKRFCSRGRMTTSADAAHC 351
            MT    EC A + F+    + +W+L +F  H  +CFG+   S     ++ +++  CT AYTA Q+AR +L    + P IS K I S+++AKGIY RQP   H+RA++REL   +  +R   MA L+GYA LLR  GH   I  CD  +M+ +R+K A+ IFKQ  K G + K+  FD G+VD+SDI D   YYSGFVF+ S A+ FC + R+ T+AD  HC
Sbjct:    1 MTFPEKECSAKVAFDWQPRNNMWKLNKFAGHSIKCFGQDMPSAASGISHARNAKQCTAAYTAHQVARTILENAAEDPKISVKSIASLVKAKGIYQRQPPYTHYRAIRRELQRHLTVSRAVGMAALDGYAALLRQQGHMAWIDICDGVEMKALRVKVAKHIFKQTVKGGALPKESVFDLGMVDVSDITDDGMYYSGFVFLLSTAQHFCQKARLITAADTTHC 221

The following BLAST results are available for this feature:

BLAST of Gcaud8736.t1 vs. uniprot

BLAST of Gcaud8736.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J5N4_9FLOR	5.380e-56	43.44	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_6454_length_1177_cov_8.614180	contig	NODE_6454_length_1177_cov_8.614180:123..1177 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8736.t1	Gcaud8736.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_6454_length_1177_cov_8.614180 123..1177 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8736.t1 ID=Gcaud8736.t1|Name=Gcaud8736.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=352bp
EFPPINLPQPECSQETTPIDITQPRRPKSQQSGSTKRKLVLDDDGSDPDK
TCRKKQRREINKRYKRRSLERAKQALHNEREAAAAWKPKRAVEINPEVGV
CFAARWICEQYCRGYTAFLGVQNGVNIHQTAEFLQMTCRTSECKAVIRFN
RLQSSGLWRLQRFVKHKNECFGRGTESTNDQSSVFCTPAYTAKQIARVVL
PELHDHPDISTKLIGSIIRAKGIYTRQPSVRHFRAVKRELNIIMERTRLE
DMAGLEGYAELLRDVGHTVQIYTCDAADMREIRLKAARFIFKQFQKSGVI
GKDEKFDKGVVDLSDIVDGKSYYSGFVFVPSVAKRFCSRGRMTTSADAAH
CX