Gcaud2592.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud2592.t1 vs. uniprot
Match: A0A2V3IWI1_9FLOR (PH_TFIIH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI1_9FLOR) HSP 1 Score: 630 bits (1626), Expect = 3.810e-225 Identity = 308/413 (74.58%), Postives = 359/413 (86.92%), Query Frame = 0
Query: 1 MADFEIERRCAFEKRPGIVQLSATNLVWTPDSAAYGREQRVPFTAISQFQVSKEGSAKKAMIRLTCSDRPNKITLDFGTSFTDRDAVRDVLNRLQSAPAFAPPVVQQPPKRPLSDKQKAWRTSLLQKKEVRQMHQRLVLTGAVTEETFWKGMKFRYTPKGELKNPNEPLDNAEALNETGVPSDAFTATKSCDDLKWDTVPSPAQRHQLFLAHPAVKRAFLHKKIGFDDEKMWALFAASSMAPRSARLKSKRDSVRAGAADAFFAPFQAKEAERAIADREKSIHNLHSTLAIDRFDDHRTEHIHDPHPPKRARVSDALRLMRMVNTHGGMIVGEGWKDSNERPLEDLVTEAEKPFAPLDVRENAPKRQTAVLDSNVAVAFSDAMTHWRADVARFSDPIALSGDVLRKLNDSMRP 413
M++FEIERRC+FEKRPGIV LSAT+LVWTP+SAA GRE RVPFTAISQFQVSKEGSAKKAMIRLTCSDRPNKITLDF TSFTDRDAVRD+LNRLQSAPA APP + PP +PL+ +Q+ WRT+LL++K+VRQMHQRLVL+ AV+E+ FWKGMKFRYTPK E +NP EPL++A+ L+ETGVPSDAFT + SCDDLKWDTVP+PAQRH +FLA PAVKRAFL + FDD +WALF+ASSMAPRSAR++SKRD+VRAG ADAFFAP+QA+EAERA +RE+S+ NLHS +AI+RFDDHRTEH+ DPHPPKRARVSDALRLMRMVNTHG MIVGEGWKD+ ERPLEDLV + +PF L V+E+A KR+ +D +A+AFSDAMTHW ADVARFS+PI SG +L KL SMRP
Sbjct: 1 MSEFEIERRCSFEKRPGIVHLSATHLVWTPNSAADGRELRVPFTAISQFQVSKEGSAKKAMIRLTCSDRPNKITLDFATSFTDRDAVRDLLNRLQSAPAPAPPPIHAPPAQPLTARQRLWRTALLKRKDVRQMHQRLVLSRAVSEDVFWKGMKFRYTPKAEPRNPTEPLEHADLLHETGVPSDAFTPSPSCDDLKWDTVPTPAQRHHIFLAFPAVKRAFLQRNATFDDHHLWALFSASSMAPRSARVRSKRDTVRAGEADAFFAPYQAREAERAQKEREQSVRNLHSDIAINRFDDHRTEHVQDPHPPKRARVSDALRLMRMVNTHGSMIVGEGWKDTLERPLEDLVDQPPRPFTKLAVQESATKREAHAIDHGIALAFSDAMTHWSADVARFSEPIHTSGQILHKLVKSMRP 413
BLAST of Gcaud2592.t1 vs. uniprot
Match: A0A7S1TGP5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGP5_9RHOD) HSP 1 Score: 81.6 bits (200), Expect = 3.900e-13 Identity = 97/407 (23.83%), Postives = 182/407 (44.72%), Query Frame = 0
Query: 12 FEKRPGIVQLSATNLVWTPDSAAYGREQ-RVPFTAISQFQVSKEGSAKKAMIRLTCSDRPNKITLDFGTS-----FTDRDAVRDVLNRLQ----SAPAFAPP------VVQQPPKRP-----------LSDKQKAWRTSLLQKK-EVRQMHQRLVLTGAVTEETFWKGMKFRYTPKGELKNPNEPLDNAEALNETGVPSDAFTATKSCDDL--KWDTVPSPAQRHQLFLAHPAVKRAF---LHKKIGFDDEKMWALFAASSMAPRSARLKSKRDSVRAGAADAFFAPFQAKEAERAIADREKSIHNLHSTLAIDRFDDHRTEHIHDPHPP------KRARVSDALRLMRMVNTHGGMIVGEG---------------WKDSNERP-LEDLVTEAEKPFAPLDVRENA 363
F+K G + + + W + RE +V ++ I+ + SKEG K A I+L + DF T+ F R+ +++ LNR + S P P V+ + RP +S ++ R +L K E+R++H+ LV ++++ F+K +KFR + + +N LD+A L E G+P+ K+ ++ + + +PA HQ+FLAHPAV RA+ + K+ + + F SS+ R R A AD F+ ++ ++A+ + + + + ++ + + D H H+ H + + + L L R +N HG +++ G W++ R LEDL+ + P PL++++++
Sbjct: 13 FDKTNGEIVVGKDAMTWKAIAPQASREGVQVEYSEIATQKASKEGG-KMAAIKLDLQSG-GSLMFDFRTANGLPDFETRNRLKNFLNRAKDQRLSDPTPDPALNRTQEVLDRASSRPRVEERSIRVNEISQRELLQRAEILMKNAEIRKLHEFLVGKRLISDDEFFKAVKFRLKRESQDENA---LDDAIQL-ERGLPTSMSDPLKAAEESVERKKFILTPAAIHQIFLAHPAVHRAYRDLVPSKM--NQAVFFQKFLESSLYNRD------RLGAAASQADELFSKYEVEDADAYRREIGERVGMIEVSINLTKQDPHEQIHLKGRHAEDSDVAIQSRKNAPFLPLARYINRHGTLVIDAGGKSSGGGESHAVHTPWREETHREVLEDLLPAPQLPTIPLEIQQSS 405 The following BLAST results are available for this feature:
BLAST of Gcaud2592.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2592.t1 ID=Gcaud2592.t1|Name=Gcaud2592.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=414bpback to top |