Gcaud2591.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2591.t1
Unique NameGcaud2591.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length215
Homology
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BLAST of Gcaud2591.t1 vs. uniprot
Match: A0A2V3IWQ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ9_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 7.260e-80
Identity = 119/217 (54.84%), Postives = 164/217 (75.58%), Query Frame = 0 
Query:    1 MRLAAVFFATVAAVVT--AQFATEEAYLEFETEYGPIPSSHCSYYKKLQEQLMSVVTVLINCGISKEKATDFVKWVVNENVFTVVDEPDMVCIPPESNTDIGTRLGEIAREHIRTKGW-DKRRRDDSPQLAFDGTDRDDTLAQKSCCRCSADEYPRGKGKCKAGPCCPNACSSLNRLTGGSAEMVSSCCEESVTQCVHKRGKQNSDGQRGKRRPPTF 214
            M  AAV  AT   + T  AQ A+EE   EF+T YG + +S+C  Y++L+++L+ V   +++CG+S + A++F +W+V ENV+  +++ D+VCIPPE  ++IGTRLG++   H R   W +KRRRDD+P+  FDG DRD+T+AQKSCC+CS DE+PRGKG+C+AGPCCP AC SL +L+GGSA+MV+SCCE SVT+C HKR K NS+GQRG RRPP F
Sbjct:    1 MHFAAVLVATAVVITTTNAQIASEEPLFEFKTTYGWVEASNCLTYEELKDELLGVARKIVSCGLSYDTASNFTEWIVTENVYKALEDADIVCIPPELGSEIGTRLGDLLL-HQRGPRWLEKRRRDDAPKFEFDGKDRDNTIAQKSCCQCSKDEFPRGKGQCRAGPCCPRACLSLTQLSGGSAKMVTSCCERSVTKCFHKRKKGNSEGQRG-RRPPAF 215
The following BLAST results are available for this feature:
BLAST of Gcaud2591.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IWQ9_9FLOR7.260e-8054.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_53_length_63756_cov_4.464180contigNODE_53_length_63756_cov_4.464180:22234..22878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2591.t1Gcaud2591.t1Gracilaria caudata M_176_S67 malemRNANODE_53_length_63756_cov_4.464180 22234..22878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2591.t1 ID=Gcaud2591.t1|Name=Gcaud2591.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=215bp
MRLAAVFFATVAAVVTAQFATEEAYLEFETEYGPIPSSHCSYYKKLQEQL
MSVVTVLINCGISKEKATDFVKWVVNENVFTVVDEPDMVCIPPESNTDIG
TRLGEIAREHIRTKGWDKRRRDDSPQLAFDGTDRDDTLAQKSCCRCSADE
YPRGKGKCKAGPCCPNACSSLNRLTGGSAEMVSSCCEESVTQCVHKRGKQ
NSDGQRGKRRPPTF*
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