Gcaud2584.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud2584.t1
Unique Name	Gcaud2584.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	628

Homology

[Close]

BLAST of Gcaud2584.t1 vs. uniprot
Match: A0A2V3IWK1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK1_9FLOR)

HSP 1 Score: 956 bits (2470), Expect = 0.000e+0
Identity = 464/626 (74.12%), Postives = 537/626 (85.78%), Query Frame = 0

Query:    1 MAEQDSMQALADSAELVLPVYALVLTPLALYVYHDILDKRWRPVWRLSHFLVAYFILYICAGSALVSYIVIQARYGKDFKEVGASALALILGTYGAWRLVRLIRIIIAHHSLVKILQRIDCSLASETGLQPVGLEYHLFRHPRTALPSRLEHTHWRYETRHDFISSALFDDDYPGDTAARIRWLACFGKRAVVIEDDAEECASRVAIWMRLVLRRPRSEPWRLLTSSSPLVQGQLYRVGLGEALRALITNGSAKKAPLHANLNPAEILLNKIEKHSLTEAAVGFFWIGSEMGTEEMTQVLAEMPPRWMRGVSQNGKQLMFELVMSLLLCEMPSPENKGMAWILSLPVLEWRRDVANLKVWSVLSELCADAVCSVLPEFSSECESRSHDEVYNIVRDGVFSLQEATSSEHGFQGDIVGLSLMELTRASYRSGYMTEQILGRALQQELNRQKDEDKEVRIYKAEIVTGLFSILQQLGQDESEEFQSSFSSMKSSWGVDESIDDVLLAIRERTKHEMRESFQFDEVAQSRGWYLGDRNCQCEDPVSAFGTAYTTAEELAPLVLQMLRQYKEKKPGVCILKGHANPDRYSEQWIRWKQTQAYEIGGSAEGLSAETPGSGSNEKGSVAVSL 626
            M   + M  LADS ELV PVYALVLTPLALYVYHDILD+RWRPVWRLS +LVAY +LYICAGS LV YIV+QARYG+D+KEVGASALALILGTYGAWRLVRL+RIIIAH SLVKILQRIDCSLA+ETGLQPVGLEYHLFRHPRT LP RL+HTHWRYE+RHDFISS+LFDDDYPGD AARIRWLACFG R VV++DDA+ECASRVA+WMRLVLRRPRSEPWRLLTS+SPLVQGQLYR GLGEALRALIT GSAK+AP HANLNPAE+LLNK  KH+LTEA +GFFWI SEMG EEM+QVLAEMPPRWMRGV+QNGKQLMFELVMSL+LCEMP P + G+ WILSLPVLEWRRDVANLKVW+ +SE+CADAVC V+P ++    S   +E++ IVR GVF+LQEATS E+GFQGDIVGLSL+EL RASYRSGY+ E++LG+AL+ EL R   E   ++IYKAEIVTGLFSIL QLGQ+++E++++ FS MKS+W V+  I DV LA+RER K EM+ SF  DE+AQSR W+LG+RNCQCEDP +AFGT++TTA E++PLV+ MLR Y + KP V ILKGHANPDRY+E W+RWK+TQAYE+ GS E   +E+ GSG    G V + L
Sbjct:    1 MTSAERMTELADSPELVFPVYALVLTPLALYVYHDILDRRWRPVWRLSRYLVAYILLYICAGSGLVFYIVVQARYGEDYKEVGASALALILGTYGAWRLVRLVRIIIAHRSLVKILQRIDCSLAAETGLQPVGLEYHLFRHPRTVLPLRLQHTHWRYESRHDFISSSLFDDDYPGDAAARIRWLACFGGRVVVLQDDADECASRVALWMRLVLRRPRSEPWRLLTSTSPLVQGQLYRAGLGEALRALITYGSAKEAPAHANLNPAEVLLNKFGKHALTEAGIGFFWIASEMGVEEMSQVLAEMPPRWMRGVTQNGKQLMFELVMSLILCEMPRPTDDGLNWILSLPVLEWRRDVANLKVWNKMSEICADAVCKVMPTYTLHGPSPPKEEIFEIVRQGVFALQEATSKEYGFQGDIVGLSLIELIRASYRSGYIAEKLLGKALESELKRHDYETAGLQIYKAEIVTGLFSILLQLGQEDNEQYEACFSEMKSTWDVNPKIIDVFLALRERAKREMQASFYLDELAQSRCWFLGERNCQCEDPATAFGTSFTTAMEISPLVIHMLRHYIKNKPTVHILKGHANPDRYNEHWMRWKRTQAYELSGSGEATISESGGSGERAGGDVVLKL 626

The following BLAST results are available for this feature:

BLAST of Gcaud2584.t1 vs. uniprot

BLAST of Gcaud2584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IWK1_9FLOR	0.000e+0	74.12	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 71..81
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 101..627
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..44
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 82..100
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..33
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..70
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 15..37

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_53_length_63756_cov_4.464180	contig	NODE_53_length_63756_cov_4.464180:4249..6132 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2584.t1	Gcaud2584.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_53_length_63756_cov_4.464180 4249..6132 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud2584.t1 ID=Gcaud2584.t1|Name=Gcaud2584.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=628bp
MAEQDSMQALADSAELVLPVYALVLTPLALYVYHDILDKRWRPVWRLSHF
LVAYFILYICAGSALVSYIVIQARYGKDFKEVGASALALILGTYGAWRLV
RLIRIIIAHHSLVKILQRIDCSLASETGLQPVGLEYHLFRHPRTALPSRL
EHTHWRYETRHDFISSALFDDDYPGDTAARIRWLACFGKRAVVIEDDAEE
CASRVAIWMRLVLRRPRSEPWRLLTSSSPLVQGQLYRVGLGEALRALITN
GSAKKAPLHANLNPAEILLNKIEKHSLTEAAVGFFWIGSEMGTEEMTQVL
AEMPPRWMRGVSQNGKQLMFELVMSLLLCEMPSPENKGMAWILSLPVLEW
RRDVANLKVWSVLSELCADAVCSVLPEFSSECESRSHDEVYNIVRDGVFS
LQEATSSEHGFQGDIVGLSLMELTRASYRSGYMTEQILGRALQQELNRQK
DEDKEVRIYKAEIVTGLFSILQQLGQDESEEFQSSFSSMKSSWGVDESID
DVLLAIRERTKHEMRESFQFDEVAQSRGWYLGDRNCQCEDPVSAFGTAYT
TAEELAPLVLQMLRQYKEKKPGVCILKGHANPDRYSEQWIRWKQTQAYEI
GGSAEGLSAETPGSGSNEKGSVAVSLW*