Gcaud2602.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2602.t1
Unique NameGcaud2602.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2602.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 16..219
e-value: 1.8E-14
score: 55.4
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 93..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_53_length_63756_cov_4.464180contigNODE_53_length_63756_cov_4.464180:51239..51901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2602.t1Gcaud2602.t1Gracilaria caudata M_176_S67 malemRNANODE_53_length_63756_cov_4.464180 51239..51901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2602.t1 ID=Gcaud2602.t1|Name=Gcaud2602.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MAALSHSELILEKERQKFVRRSEYRIKKYSCEQSMVDLALLIFLDSDDRS
KDQYGIQLCERAIKQHNSASAMFALAQHFYLDGTEEQKQRLSPLLEASVK
LHPSKETLYFLGKVLFYGKFGQTDRLRGTSLLQRALKVGDDYIVMGSLAK
MYLLHPNPVVKKKEALQMFKRAIEIGNDPYHMRQLARLYETGTLVLKACE
RCRLKWTQRADECEQNGGAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf