Gcaud7539.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7539.t2
Unique NameGcaud7539.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length589
Homology
BLAST of Gcaud7539.t2 vs. uniprot
Match: R7Q1Y8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1Y8_CHOCR)

HSP 1 Score: 374 bits (961), Expect = 1.390e-116
Identity = 238/607 (39.21%), Postives = 350/607 (57.66%), Query Frame = 0
Query:    1 LREAIAAQNAGVVFDRAKFDEHQTAARQRILSDFYTRVNQIRYLAWLQSRQLGQRNAALSTQSQSATH-----DDLATSFAFQTQSQERALESALRPGLFGNGHGQPVINRSGSNADYAMNGSTRILSSLQNKGE-SNTSRDPVYEVVDARDLES--RLLEVNKDKP-----PRAKH-DRNLDN---RAVDGRAEARTHGKKARRLESMTDKDQELVFRVHLRQVESAVTYKDDYYSGMYRKNEKLGVGDLYSDLAKRVNEMRLRNRMRGTSGRPYRSRRSKRV-LQPNENQLSSSPQSIESSMNALATALGSVQTWNPRAPRRVMDFSSIERK-TGKGSESKLLRDDERVKVRHEIERGYDIMAVIHDIVRGESSEVLEDQIQNLLQTLHIESTDEEPDNSAIVANPGLRFFGTLCVLEKGRRYLARVLDILDISERIRVIPFVFESLGAMIYSLQRSRRSALSG--EGDIVAKSLQTIRDSHTSAFDCITMLNSFSSTHSARPDAFLTTFRSATGAKLMYCCMQRISAGLYKKEIDKEDVSRAGVGKLAKVFTEMLQRIFDKAELVNRAWEVTASFDSILAGEARSLLRAELNRLLRSGAAPPPP 586
            L+EA  AQ AG+ FDR +FD HQ   RQRIL D ++R+   + L W  ++Q+ Q++A    +           D  +   A   +S   +   A+         G+P +N     A    NG  +   S   +G+ S+    P    +   +L+   RL E+ +        P +K+ DR+      R  +   +A+      RRLESMTD+DQE VFR HLRQ+E++V YKDDYY+ +  K  +    D+Y+DLA+RV  +R+R++ RG  G   R R SKR     +++QL+SS    + +  ALA ALG+VQ+W+PRAPRRVMDF  +E++ T  G   K LRDDERV VR EIERGYDI+A IHDI RGES + L   IQ L+ TLH+     + D          RFF T+CV+EKGRRYL+ VL++++  +++R +  +FE+LG ++++ ++S   A  G  +  + A  ++ ++D    A DC+ + NSFS++H    DAFLTTFRS  GAK+++ CMQRISAGL    I +ED+S +G+    + FTE L  +F  AE  +R WE  AS D++  G+ R+  R+EL+RL+ +G  P PP
Sbjct:  224 LQEAQRAQQAGITFDRKEFDRHQEGTRQRILLDHHSRLRHSQMLVWQMTQQVIQQSAERPIEQTPVLDLRRRVDPASPPHAGYARSPVDSFFPAMAS------LGEPAVN-----ASMRPNGRDQARGSAHVEGQQSSIISAPRMPKLSDEELQKAPRLQEIERQMAAAGLGPNSKNTDRDTFGSPVRRTERSPQAQVKKTSQRRLESMTDRDQEWVFRAHLRQIETSVVYKDDYYNSVLTKKLRESNPDIYADLAERVQALRVRDKERGAYGNSMRIRGSKRGNAGKDDSQLASSAHHSDQNTRALANALGTVQSWHPRAPRRVMDFGLLEKRDTADGLPQKSLRDDERVHVRQEIERGYDIIATIHDIARGESHKSLGPTIQTLMSTLHLAEKMGDEDRGERDGVRSTRFFATMCVIEKGRRYLSHVLELVEDGDKVRAMCAIFENLGMLVFASRKSSGKATIGGSQKGLFAIMMKIVQDPDIRAQDCLAIFNSFSTSHVPHRDAFLTTFRSGVGAKIVFLCMQRISAGLAMHVIGEEDISASGIDGFTQGFTEALPDVFKGAESESRVWEAMASLDALSRGDTRATYRSELHRLMLAGTVPNPP 819          
BLAST of Gcaud7539.t2 vs. uniprot
Match: A0A5J4Z7F6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7F6_PORPP)

HSP 1 Score: 78.6 bits (192), Expect = 1.530e-11
Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 0
Query:  192 MTDKDQELVFRVHLRQVESAVTYKDDYYSGMYRKNEKLGVGDLYSDLAKRVNEMRLRNRMRGTSGRPYRSRRSKRVLQPNENQLSSSPQSIESSMNALATALGSVQTWNPRAPRRVMDFS----------------------------SIERKTG--KGSESKLLRDDERVKVRHEIERGYDIMAVIHDIVRGESSEVL 360
            MT +D + V RVHLRQ+E+   Y DDYY   +     L V DL   +A   +     NR R  +      R S+   QP  +       S  + +  L+TALG+++TW P+APR+++  S                            ++E++    K +   LLR+DERV+ R  IE GYDI A + DI RG+ + ++
Sbjct:  198 MTARDLDTVVRVHLRQLETQDDYVDDYYLLQFCARNNLSVDDLQVRMAVSSSFSNFVNRARAAA----LQRASEGAAQPVTDATLKEAHSARN-IELLSTALGTLRTWTPKAPRKLVSVSDEGRSADADDAAALSSLNPLAGLASLGGTLEKRRAVLKQNSVALLREDERVRARSLIEAGYDIFAELRDIERGQLTGIV 391          
BLAST of Gcaud7539.t2 vs. uniprot
Match: A0A7S1XJK5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XJK5_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-10
Identity = 77/321 (23.99%), Postives = 129/321 (40.19%), Query Frame = 0
Query:  191 SMTDKDQELVFRVHLRQVESAVTYKDDYYSGMYRKNEKLGVGDLYSDLAKRVNEMRLRNRMRGTSGRPYRSRRSKRVLQPNENQLSSSPQSIESS-----------------------------------MNALATALGSVQTWNPRAPRRVMDFSSIERKT-----------------------------GKGSESKLLRDDERVKVRHEIERGYDIMAVIHDIVRGESSEV---LEDQIQNLLQTLHIESTDEEPDNSAIVANPGLRFFGTLCVLEKGRRYLARVLDIL-DISERIRVIPFVFESLGAMIYSLQRSRRS 443
            +MT +D E+V R+HLRQ+ES+ + +D++YS  +         D    +   +  +     +   SGRP  S  S R      N LS    +  +S                                   +  L+ +LG++Q+W P APRR+++  S  + +                             G+ + ++ L +DER+  R  IERGYD++A + D  +G S E    L D  +     L+     +EPD   +       FF  + +LEKGR  +  +L++L ++         V E+L     S  R R+S
Sbjct:  123 AMTARDVEIVLRMHLRQLESSDSPRDNFYSNTFCAKHGASTCDFQGTMNTYLGAL---PSLSSNSGRPPYSSSSGRAGADERNSLSGDSNAASASHSRPGEQTGGGGVAGNDAKSKTQDADRPRPHTASNLTVLSKSLGTLQSWTPNAPRRILEVQSASKASASALASADEREAVTRRALDMRHAARDAADGRATGAQPLANDERIIARIAIERGYDLLADLADARKGRSGESGTSLGDLERRTADALYALLQLDEPDGINV-------FFLRIVLLEKGRALVTALLELLSELCTESEATDDVAEALDRADLSESRIRKS 433          
BLAST of Gcaud7539.t2 vs. uniprot
Match: M2XKF2_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKF2_GALSU)

HSP 1 Score: 63.2 bits (152), Expect = 9.890e-7
Identity = 65/255 (25.49%), Postives = 115/255 (45.10%), Query Frame = 0
Query:  192 MTDKDQELVFRVHLRQVESAVTYKDDYYSGMYRKNEKLGVGDLYSDLAKRVNEMRLRNRMRGTSGRPYRSRRSKRVLQPNENQLSSSPQSIESSMNALATALGSVQTWNPRAPRRVMDF-------SSIERKTGKGSESKLLRDDERVKVRHEIERGYDIMAVIHDIVRGESS--EVLEDQIQ---NLLQTLHIESTDEEPDNSAIVANPGLRFFGTLCVLEKGRRYLARVLDILDISERIRVIPFVFESLGAMI 434
            MT  + EL+ ++H+RQ+E++    +D+Y   YR+ E+            R +E +L+         PY     K+ L+         P   E+++  L  ALGS+Q +NP APRR++         SS+ER     +++    +D R+  +  I   +DI+  + D +   SS  E+ E + +    LL T  I   +   D +  +       F  +C L KGR+ L R   +L  +    ++  +  SLG ++
Sbjct:  283 MTCSEIELIAKMHIRQLETSSWPVEDFYCQAYRQKEQ------------RRSEEQLKEY-------PYSRDTKKKTLRSGYF-----PHHSENNLKILERALGSIQGYNPNAPRRMVQVALESVSDSSLERDEAHVTDTPF-HEDSRIAAQSVISLAFDILFDLEDELSVYSSVAELEEHKTKMSRKLLNTFGITVDENLRDETRNI-------FSRICALPKGRKLLIRCFSVLPRTYLTPLLNMILFSLGMIL 505          
The following BLAST results are available for this feature:
BLAST of Gcaud7539.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7Q1Y8_CHOCR1.390e-11639.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z7F6_PORPP1.530e-1131.16Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1XJK5_9RHOD1.770e-1023.99Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2XKF2_GALSU9.890e-725.49Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..283
IPR039900Pat1-likePANTHERPTHR21551TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1coord: 78..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:49842..51608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7539.t2Gcaud7539.t2Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 49842..51608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7539.t2 ID=Gcaud7539.t2|Name=Gcaud7539.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=589bp
LREAIAAQNAGVVFDRAKFDEHQTAARQRILSDFYTRVNQIRYLAWLQSR
QLGQRNAALSTQSQSATHDDLATSFAFQTQSQERALESALRPGLFGNGHG
QPVINRSGSNADYAMNGSTRILSSLQNKGESNTSRDPVYEVVDARDLESR
LLEVNKDKPPRAKHDRNLDNRAVDGRAEARTHGKKARRLESMTDKDQELV
FRVHLRQVESAVTYKDDYYSGMYRKNEKLGVGDLYSDLAKRVNEMRLRNR
MRGTSGRPYRSRRSKRVLQPNENQLSSSPQSIESSMNALATALGSVQTWN
PRAPRRVMDFSSIERKTGKGSESKLLRDDERVKVRHEIERGYDIMAVIHD
IVRGESSEVLEDQIQNLLQTLHIESTDEEPDNSAIVANPGLRFFGTLCVL
EKGRRYLARVLDILDISERIRVIPFVFESLGAMIYSLQRSRRSALSGEGD
IVAKSLQTIRDSHTSAFDCITMLNSFSSTHSARPDAFLTTFRSATGAKLM
YCCMQRISAGLYKKEIDKEDVSRAGVGKLAKVFTEMLQRIFDKAELVNRA
WEVTASFDSILAGEARSLLRAELNRLLRSGAAPPPPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039900Pat1-like