Gcaud1680.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1680.t1
Unique NameGcaud1680.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length572
Homology
BLAST of Gcaud1680.t1 vs. uniprot
Match: R7QAK7_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAK7_CHOCR)

HSP 1 Score: 225 bits (574), Expect = 4.100e-64
Identity = 150/368 (40.76%), Postives = 214/368 (58.15%), Query Frame = 0
Query:  212 CSLQPTKSPSPSPVVESSSPSTVPPVPDVVELNETVQIPPSTRLSDPITFSFTVEVRPGSGSTLEDLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTDEKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSC-ISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCEAAEPAP---TDVGQADAITAGTGGSV--VEQEELTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEIT--ACGDAKGAFTCTVRFSLSGTTIGEHTLSSSGLDVC 571
            C + PT +PSPS +  S  P  VP +         +Q PP   +   I  +  V V   S ST+ED YLL+D T S     +E++ENF  +V  R N S +VAFGVG Y DE+D P FEN QS++TN+  V  AI +L  +     GD PEANL A+  VAT+ +IGWR+GSR+I+++FGDAPGHEP+C   S+ L RD V+  LN+  I VVA +F  ++++   GLN  T    +G     P P   +  GQADAIT+GT GS+  +   +   +I+  L  V +LPQ L   T+DC+ + VAI+F P LPL I++G +++I +   I   AC    G FTC +  +LSG  +   T++++ +  C
Sbjct:   76 CGVAPTPTPSPSQIPISEGPIMVPTI---------LQFPPEIEIGGTINVTIEVTVDDLSSSTMEDFYLLSDATGSMAEEITEVQENFDMLVDARRNASGDVAFGVGFYRDEEDIPPFENLQSLTTNLGLVDTAIASLNAV---DGGDIPEANLFAISEVATNPSIGWRDGSRKILVYFGDAPGHEPTCPADSVPLTRDVVVDQLNEIGIAVVATNFAASNTE---GLNAATTSA-TGTNFGCPGPVVNSPSGQADAITSGTLGSIRRIADSDAGSLIDQILDAVTALPQELSVSTTDCDGR-VAITFRPDLPLLIAAGETRSIVEEATILPGACEFPDG-FTCEINLNLSGVGV-RQTIATTSIAGC 424          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A2V3IVR2_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVR2_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 2.610e-48
Identity = 125/313 (39.94%), Postives = 177/313 (56.55%), Query Frame = 0
Query:  263 FTVEVRPGSGSTLE-DLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTDEKDDPF-FENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSCISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNG-PTKWVGSGCEAAEPAPTDVGQADAITAGTGGSVVEQEELTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEIT-ACGDAKGAFTCTVRFSLSGTTIGEHTLSSSGLDVC 571
            F+ +V   + S L+ D+YLL+D T S     +E+R  F++IV    +V+    FG+G + DE D    F N Q I+ + +AV+ AI  L    +   GD PEANL AL+ VAT  +IGWR  SR+IVM+FGD PGHEP+C+ SLQL RD+VI ALN  KITVVA SF       +PGL+G PT +    C    PA    GQ  AI+  TGG +V   + TQ+IE     V ++ +T + DTSDC+   +  +  P LP+T+++G SQ + Q+V I     +  G F C   ++ +G  +         +D C
Sbjct:   99 FSFQVNLNTASPLQTDIYLLSDATGSMRTAIAEVRTRFSEIVEMFESVTD-AHFGIGFFRDESDPGNGFINLQGITGDRAAVQTAIDTLV---ARGGGDRPEANLVALHKVATDSSIGWRPASRKIVMYFGDNPGHEPTCVGSLQLDRDDVIEALNAMKITVVAVSF-------NPGLDGNPTVF---SCRRVPPAGR--GQGTAISTATGGVLVPNTQQTQLIEALQNAVLNIDRTFDIDTSDCDGM-LTTTTDPTLPVTLAAGDSQVVEQTVIIEQGICETDGPFECQFTYTEAGAALPPSRFRVLAIDGC 394          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A2V3ILK4_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILK4_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 1.350e-46
Identity = 119/285 (41.75%), Postives = 168/285 (58.95%), Query Frame = 0
Query:  277 DLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTDEKD-DPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSCISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNG-PTKWVGSGCEAAEPAPTDVGQADAITAGTGGSVVEQEELTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEI-TACGDAKGAFTCTVRFSLSGTTI 558
            D+YLL+D T S     +E+R  F++IV    +V+    FG+G + DE +    F N Q I+ + +AV+ AI +L    +   GD PEANL AL+ VAT  +IGWR  SR+I+M+FGD PGHEP+C+ S+ L RD VI ALN   ITVVA SF       +PGL+G PT +   GC  A PA    GQ  AI+  TGG +V   + TQ+IE     V ++ +T + DTSDC+ + +  +  P LP+T+++G SQ I QSV I +   D  G F C   ++ +G  +
Sbjct:  114 DIYLLSDATGSMRTAIAEVRTRFSEIVEMFESVTD-AHFGIGFFRDESELGNGFMNLQGITGDRAAVQTAIDSLV---ARGGGDRPEANLVALHQVATDSSIGWRPASRKILMYFGDNPGHEPTCVGSVPLDRDEVIKALNAMNITVVAVSF-------NPGLDGNPTVF---GCSGAIPAGP--GQGTAISTATGGVLVPNTQQTQLIEALENAVLNIDRTFDIDTSDCDGK-LTTTTDPMLPVTLAAGDSQVIEQSVIIDSGICDTVGPFECQFNYTEAGAAL 381          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A1X6PIV9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIV9_PORUM)

HSP 1 Score: 142 bits (357), Expect = 1.590e-34
Identity = 104/289 (35.99%), Postives = 148/289 (51.21%), Query Frame = 0
Query:  295 IRENFAQIVTERSNVSSNVAFGVGSYTDEKD-DPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDN--IGWREGSRRIVMHFGDAPGHEPSCISS--LQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGS-GCEAAEPAPTDVGQADAITAGTGGSVVEQEE-LTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEI-----TACGDAKGAFTCTVRFSLSGTTIGEHTLSSSGLDVC 571
            +R    +IV  RS VS +V FGVGSY DE D +  +   Q ++ +++AV+ A+G  +        DAPEANL ALY +AT  +  IGWR+G+RR+V  FGD PGHEPSCI     +L R+ V   L    ITVVA S      K +          G+ G E   P P   GQA AI   TGG V+  +   + +I + LA V +L   L A T  C+    ++SF P LP T+  G+   I Q++ +     TA       F+C+V +  SG +     +++  +  C
Sbjct:    8 VRAELPKIVAARSAVSGSVHFGVGSYRDEADPNTGWILDQRVTGDLAAVRAAVGGFEAT---GGADAPEANLVALYRLATLPDAAIGWRDGARRVVAWFGDQPGHEPSCIDGGRTRLTRELVAARLRDAFITVVAVSLSGGMDKATTKFGTCAAAAGTPGAEPTAPNPGRTGQASAIAKATGGVVLALDSGSSDLIVDALAAVDALDVQLTAVTKGCDGV-FSVSFDPPLPRTVKPGTVVRIKQTIRVDARVCTALSAPGKPFSCSVDYRASGGSFASQKVATQAITGC 292          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A1X6P9A4_PORUM (VWFA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9A4_PORUM)

HSP 1 Score: 115 bits (289), Expect = 1.870e-24
Identity = 88/272 (32.35%), Postives = 133/272 (48.90%), Query Frame = 0
Query:  276 EDLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTDEKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSC-ISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGP-TKWVGSGCEAAEPAPTDVGQADAITAGTGG-SVVEQEELTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEITA--CGDAK 542
            ED+ L++D T S       ++   + +++ R  V+ +  FGV SY DEK+  F +  Q ++   +AV++AI  L        GDAPEANL AL+ VAT   +GW  GSRR+V+ FGD PGHEPSC +  ++  R +V+ AL   +I+V+A       +K      G  T   G+   A+   P    QA  +  GT G S+  ++   + +   L  +  L   L   T DC     ++ + P  PL +  G   T    V + A  C D K
Sbjct:   83 EDVMLMSDTTGSMGEALETVQTQLSDLISARRKVAGDTRFGVASYRDEKEYSF-QLHQPLTDEDAAVQRAIDRLS---HGGGGDAPEANLPALHAVATDKRVGWSPGSRRLVIWFGDVPGHEPSCAVRGVRHTRQSVLAALRAARISVIAIGVNNGLNKGMDIRKGRGTNSFGTCVPASANKPISPNQALFLVKGTSGLSMTVKKGAKEEVSKALKAIDDLTVRLTPVTVDCRGI-FSVRYVPAAPL-LKVGDETTFQTCVTVNAQACKDPK 348          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A349KZT6_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Janthinobacterium sp. TaxID=1871054 RepID=A0A349KZT6_9BURK)

HSP 1 Score: 96.7 bits (239), Expect = 1.750e-17
Identity = 86/267 (32.21%), Postives = 122/267 (45.69%), Query Frame = 0
Query:  230 SPSTVPPVPDVVELNETVQIPPSTRLSDPITFSFTVEVRPGSGSTLEDLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTD-EKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAAL--YTVATSDNIGWREGSRRIVMHFGDAPGHEPSCISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCEAAEPAPTDV-GQADAITAGTGGSVVEQEELTQVIENTLAEVHS 492
            +P T+ P  +V+ LN      P   L + IT    V +   +G    D+Y L D T S  GI   ++   A ++   + +  ++ FGVG+Y D    DP+    Q    N++    A  N     +   GD+PEA L AL    VA    IGWR GS+RI++ FGD P H+P C  S       V  A    K+     + VLA S  +PGL+G      +G  A   AP    GQA  ITA TGG++        ++   +A V S
Sbjct:   93 APVTIDPSSNVLTLN------PGQILDETIT----VTIPKNAGPIKADVYFLADTTASMGGILGAVQAGSANVLAALNGLGVDIVFGVGNYKDFASGDPYGFQHQLNPGNVAPAVAAAINAW--SASGGGDSPEAALFALDSLAVAPGGGIGWRAGSKRIIVWFGDVPSHDPIC--SAVSGAPTVTEASATAKLVNEGIA-VLAISTANPGLDGDPTIGATGYVAQCGAPGGAAGQASRITAATGGALAVGINAGNLVNTIIALVKS 344          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A844MZ01_9CYAN (VWFA domain-containing protein n=1 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MZ01_9CYAN)

HSP 1 Score: 94.4 bits (233), Expect = 9.410e-17
Identity = 85/263 (32.32%), Postives = 127/263 (48.29%), Query Frame = 0
Query:  247 VQIPPSTR---LSDPITFSFTVEVR-PGSGSTLE-DLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTD-----EKDDPF-FENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVAT--SDNIGWREGSRRIVMHFGDAPGHEPSC--ISSLQ--LRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCE--AAEPAPTDVGQADAITAGTGGSVVEQEELTQVIENTLAEV 490
            +Q+ P T    LS   TF+  V+V  P SG   + D+Y L D T+S       ++   + I+T+   + ++V FGVG Y D       + P+ F ++ S+S N + +K+ +    +    S  D PEA   AL  VA      IGWR  S+RIV+ FGDA GH+  C  IS+L   +   +V   L  +KI V+A S  L S     GL+   K   +G +    +P  T  GQ   I   TGG +V+      ++E   AE+
Sbjct:    5 IQVSPVTNDLTLSIDQTFAEVVKVTIPKSGVVPKVDVYFLADTTSSMRTAIDAVKNGISDILTQIGGLGADVQFGVGEYKDFPAPVTGEHPYAFAHQHSLSANTATIKEKVAGWTVT---SGKDVPEAQFYALDRVAEPPGGQIGWRADSKRIVVWFGDAAGHDAVCKQISNLSYDITEASVTAKLVAEKIKVLALS--LRSDGAPAGLDDDPKTKATGYQPFCGDPGGTQ-GQGTRIAKATGGKLVQGVSANTIVETIAAEL 261          
BLAST of Gcaud1680.t1 vs. uniprot
Match: UPI00135AA59E (hypothetical protein n=1 Tax=Ornithinibacter aureus TaxID=622664 RepID=UPI00135AA59E)

HSP 1 Score: 92.8 bits (229), Expect = 3.820e-16
Identity = 70/216 (32.41%), Postives = 107/216 (49.54%), Query Frame = 0
Query:  264 TVEVRPGSGSTLEDLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTD----EKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSCISSLQL----RRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCEAAEPAPTDVGQADAITAGTGG 471
            TV + P   +   D+YLL D T S + +   ++     I+ + +  + ++A+GVG+Y D      +   F+++ + +T+ +A   AI      +    GD PE  L AL  +AT+ +IGWR  S+RI++ FGDAPGH+P C     L           AL+   ITVVA S    ++  +  L+G    +GS       A    GQA  ITA TGG
Sbjct:  124 TVTIPPTGTAPKADVYLLADTTGSMLPVIDAVKAGAGAILGDPALAAFDIAWGVGNYRDFTVPAPNSYAFQHQLAPTTSAAAASAAISTWNADE---GGDTPEGQLYALQELATNASIGWRTDSKRIIVWFGDAPGHDPICTDLTGLPAAITEATATAALSGANITVVAVS---TTTGVTDALDGDPN-LGSFDYPTCAANGAAGQATRITAATGG 332          
BLAST of Gcaud1680.t1 vs. uniprot
Match: A0A345NMI6_9MICO (VWA domain-containing protein n=2 Tax=Ornithinimicrobium avium TaxID=2283195 RepID=A0A345NMI6_9MICO)

HSP 1 Score: 91.3 bits (225), Expect = 5.600e-16
Identity = 87/327 (26.61%), Postives = 146/327 (44.65%), Query Frame = 0
Query:  257 DPITFSFTVEVRPGSGSTLE------------DLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTDEKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVA-TSDNIGWREGSRRIVMHFGDAPGHEPSCISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCEAAEPAPTDVGQADAITAGTGGSVVEQEELTQVIENTLAEVHSLPQTLEADTSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEITACGDAKGAFTCTVRFSLSGTTIGEHTLSSSGLDV 570
            DP T+S  ++  PG+  T+             D+ LL D T S  G  + ++ N A IV+       +  + V SY D  +   F     +  + +A   A+ ++++      GD PEA L AL+ +  T D + +R  S RIV+ FGDAPGH+PS             T  +     V A + VLA S  +  L+                    GQA  IT  TGG++    +   + +  LA + +LP  + A T+ C+   ++ +  P    T++SG + + S+++ + A  +      C V F+L+GT  G+  + +  +DV
Sbjct:   24 DPPTYSDALD--PGASVTITKTVTTPEVLPQPDIVLLVDRTGSMGGAITNVKANMATIVSTVEAAQPDAQWAVASYCDVGEPDPFLLHSDLGADTTATVAAVNSIRLC---GGGDEPEAQLNALWEIGDTGDAVAFRPDSSRIVVWFGDAPGHDPSLGH----------TEADATSSLVDAGATVLAVSVGADRLDA------------------TGQATRITDVTGGALYSGVDAGDLADTILAGITALPVEVGATTT-CDP-GLSATLDPATR-TVTSGDAASFSETITVAADAEQGATLGCQVAFTLNGTPAGDGFVQTVSVDV 314          
BLAST of Gcaud1680.t1 vs. uniprot
Match: UPI00034792B2 (hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 TaxID=1075768 RepID=UPI00034792B2)

HSP 1 Score: 91.7 bits (226), Expect = 8.300e-16
Identity = 73/220 (33.18%), Postives = 105/220 (47.73%), Query Frame = 0
Query:  262 SFTVEVRPGSGSTLEDLYLLTDLTTSTIGINSEIRENFAQIVTERSNVSSNVAFGVGSYTD-EKDDPFFENRQSISTNISAVKKAIGNLQIIKSFSNGDAPEANLAALYTVATSDN--IGWREGSRRIVMHFGDAPGHEPSCISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGP-----TKWVGSGCEAAEPAPTDVGQADAITAGTGGSV 473
            + TV +    G+   D+Y L D T S  GI + ++   A ++   + +  ++ +GVG+Y D    DP+    Q   TN +A   A  N     +   GD PE  L AL ++A +    IGWR GS+RIV+ FGD P H+P C            +A  K     +A   VLA S  +PGL+G      T +V    +   PA T  GQA  IT  TGG++
Sbjct:  115 TITVTIPKSGGAVKADVYFLADTTASMGGILAAVQAGSANVLAALNGLGLDLVYGVGNYKDFASGDPYGFQHQLAPTNAAAPVTAAINAW--SASGGGDGPECALFALDSLAEAPGGGIGWRAGSKRIVVWFGDVPSHDPICSGVSGAATVTEASATAKLVAEGIA---VLAISTANPGLDGDPAAGATDYV---AQCGPPAGTP-GQATRITNATGGAL 325          
The following BLAST results are available for this feature:
BLAST of Gcaud1680.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QAK7_CHOCR4.100e-6440.76VWFA domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3IVR2_9FLOR2.610e-4839.94VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3ILK4_9FLOR1.350e-4641.75VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A1X6PIV9_PORUM1.590e-3435.99Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P9A4_PORUM1.870e-2432.35VWFA domain-containing protein n=1 Tax=Porphyra um... [more]
A0A349KZT6_9BURK1.750e-1732.21Uncharacterized protein (Fragment) n=1 Tax=Janthin... [more]
A0A844MZ01_9CYAN9.410e-1732.32VWFA domain-containing protein n=1 Tax=Scytonema s... [more]
UPI00135AA59E3.820e-1632.41hypothetical protein n=1 Tax=Ornithinibacter aureu... [more]
A0A345NMI6_9MICO5.600e-1626.61VWA domain-containing protein n=2 Tax=Ornithinimic... [more]
UPI00034792B28.300e-1633.18hypothetical protein n=1 Tax=Janthinobacterium sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 276..413
e-value: 3.0E-23
score: 84.6
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 277..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..571
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_494_length_23790_cov_4.579307contigNODE_494_length_23790_cov_4.579307:16822..18537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1680.t1Gcaud1680.t1Gracilaria caudata M_176_S67 malemRNANODE_494_length_23790_cov_4.579307 16822..18537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1680.t1 ID=Gcaud1680.t1|Name=Gcaud1680.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=572bp
MTRSITILLLVTLLSVTFAAPHPLSRQNSASSGTQTSGSGASGNNAVAVS
ADTQSGSGAAAGEDNAAVIAGPGFASGVANTNPTPSPLATPSPSVSSSVS
PTPSASPSLSASVSSTSSPSASASPSKTEEDDSEQATVTAGTADGNSATA
TGTNVVSAASNGDSGAASAAGENAAGAFAGPCQAGGFAFGNGQFPFNFGP
FAGLFGSPSTNCSLQPTKSPSPSPVVESSSPSTVPPVPDVVELNETVQIP
PSTRLSDPITFSFTVEVRPGSGSTLEDLYLLTDLTTSTIGINSEIRENFA
QIVTERSNVSSNVAFGVGSYTDEKDDPFFENRQSISTNISAVKKAIGNLQ
IIKSFSNGDAPEANLAALYTVATSDNIGWREGSRRIVMHFGDAPGHEPSC
ISSLQLRRDNVITALNKQKITVVAFSFVLASSKYSPGLNGPTKWVGSGCE
AAEPAPTDVGQADAITAGTGGSVVEQEELTQVIENTLAEVHSLPQTLEAD
TSDCEAQNVAISFSPGLPLTISSGSSQTISQSVEITACGDAKGAFTCTVR
FSLSGTTIGEHTLSSSGLDVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf