Gcaud2210.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2210.t1
Unique NameGcaud2210.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length211
Homology
BLAST of Gcaud2210.t1 vs. uniprot
Match: A0A2V3IMX4_9FLOR (Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMX4_9FLOR)

HSP 1 Score: 377 bits (969), Expect = 8.540e-132
Identity = 189/201 (94.03%), Postives = 193/201 (96.02%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDDDDASNFSMSESEGEAADDILDDDEDGALAPLSVADEK 201
            MASPGKRRETDLMKLMMADYEIQMADGDRVGEF+VKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYV KYAKPEDFPTGD A+GE+DDDASNFSMSESEGEAADDIL  DE GAL+ L V DEK
Sbjct:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFYVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVHKYAKPEDFPTGDGADGENDDDASNFSMSESEGEAADDILAGDE-GALSALDVDDEK 200          
BLAST of Gcaud2210.t1 vs. uniprot
Match: R7QGH1_CHOCR (Ubiquitin-conjugating enzyme, E2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGH1_CHOCR)

HSP 1 Score: 323 bits (828), Expect = 2.110e-110
Identity = 155/178 (87.08%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDDDDASNFSMSESEGE 178
            MASPGKRRETDLMKLMMAD+EIQMADGDRVGEF+VKFHGPK TPYEGGVWKVHVELP+ YPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQ+WSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREP+RYKQKV EYVQ+YAKPEDFP+G   +      AS+FSM++SEGE
Sbjct:    1 MASPGKRRETDLMKLMMADHEIQMADGDRVGEFYVKFHGPKQTPYEGGVWKVHVELPETYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQTWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPDRYKQKVREYVQRYAKPEDFPSGSADDXXXXXXASSFSMTDSEGE 178          
BLAST of Gcaud2210.t1 vs. uniprot
Match: A0A1X6P6P2_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6P2_PORUM)

HSP 1 Score: 293 bits (749), Expect = 4.800e-98
Identity = 134/159 (84.28%), Postives = 147/159 (92.45%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTA 159
            MASPGKRRE DLMKLMMADY++QM DGD VG F+V+FHGPK TPYEGGVWKVHVELP+AYPYKSPSIGFINRL+HPNVDEMSGSVCLDVINQ+WSPMYDL NIF++FLPQLLTYPNPTDPLNGEAAALQ+REPERY+ KV + V KYAKPED+P G TA
Sbjct:    1 MASPGKRREMDLMKLMMADYDVQMCDGDNVGAFYVRFHGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFINRLFHPNVDEMSGSVCLDVINQTWSPMYDLKNIFDIFLPQLLTYPNPTDPLNGEAAALQLREPERYEAKVKDMVAKYAKPEDYPQGSTA 159          
BLAST of Gcaud2210.t1 vs. uniprot
Match: A0A5J4YJ08_PORPP (Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ08_PORPP)

HSP 1 Score: 291 bits (745), Expect = 6.960e-98
Identity = 132/156 (84.62%), Postives = 146/156 (93.59%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTG 156
            MASPGKRRE DLMKLMMADY++ M D DRVGEF+VKFHGPK TPYEGG+WKVH ELPDAYPYKSPSIGF+NR+YHPNVDE+SGSVCLDVINQ+WSPMYDL NIFEVFLPQLLTYPNPTDPLNGEAAALQMREPE +K++  EYVQ+YA+PEDFP+G
Sbjct:    1 MASPGKRREMDLMKLMMADYDVVMCDEDRVGEFYVKFHGPKDTPYEGGLWKVHCELPDAYPYKSPSIGFVNRIYHPNVDEVSGSVCLDVINQTWSPMYDLINIFEVFLPQLLTYPNPTDPLNGEAAALQMREPEEFKKRCREYVQRYARPEDFPSG 156          
BLAST of Gcaud2210.t1 vs. uniprot
Match: R7QF75_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF75_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 2.230e-94
Identity = 145/181 (80.11%), Postives = 158/181 (87.29%), Query Frame = 0
Query:   24 MADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDDDDASNFSMSESEGEAADDILDDDEDGALAPLSVADEKDLD 204
            MADGDRVG+F+VKFHGPK TPYEGGVWKVHVELP+ YPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQ+WSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREP+RYKQKV EYVQ+YAKPEDFP+G   + EDDDDAS FSM++SEGE  DD+    + GA  P    D + LD
Sbjct:    1 MADGDRVGKFYVKFHGPKQTPYEGGVWKVHVELPENYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQTWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPDRYKQKVREYVQRYAKPEDFPSGSADDKEDDDDASRFSMTDSEGE--DDVPLPGDVGASNPAGAKDIEKLD 179          
BLAST of Gcaud2210.t1 vs. uniprot
Match: M2Y2Q8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q8_GALSU)

HSP 1 Score: 274 bits (700), Expect = 6.460e-91
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDDDD 166
            MASP KRRETDLMKLMMA+YE+++A+ DRVG+FFVKF GP  TPYEGGVWKVHV LP+AYPYKSPSIGF+NR+YHPNVDEMSGSVCLDVINQ+WSPM+DL NIFEVFLPQLLTYPNP+DPLNGEAAAL+MREPE+Y  KV +YVQ+YA P  F +      EDD D
Sbjct:    1 MASPSKRRETDLMKLMMAEYEVELAENDRVGDFFVKFCGPVDTPYEGGVWKVHVTLPEAYPYKSPSIGFVNRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPSDPLNGEAAALEMREPEKYVAKVKDYVQRYAHPSLFASSSKKELEDDSD 166          
BLAST of Gcaud2210.t1 vs. uniprot
Match: M2W4S3_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4S3_GALSU)

HSP 1 Score: 264 bits (675), Expect = 3.840e-87
Identity = 118/164 (71.95%), Postives = 143/164 (87.20%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDD 164
            M+SP KRRE DLMKL+MADYE+++++ ++V +F+VKFHGP  T YEGGVWKVHV+LPDAYPYKSPSIGF+N++YHPNVDE SGSVCLDVINQ+WSPM+DL NIFEVFLPQLLTYPNPTDPLNGEAAALQ+++PE++  KV EYVQK+A PE FP+    +   D
Sbjct:    1 MSSPSKRREMDLMKLLMADYELELSEENQVSDFYVKFHGPPETAYEGGVWKVHVQLPDAYPYKSPSIGFVNKIYHPNVDEASGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPTDPLNGEAAALQLKDPEKFTSKVKEYVQKFALPEHFPSSKAEDSSSD 164          
BLAST of Gcaud2210.t1 vs. uniprot
Match: A0A7J7IEX2_9RHOD (Ubiquitin-conjugating enzyme E2 8 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEX2_9RHOD)

HSP 1 Score: 260 bits (665), Expect = 4.850e-85
Identity = 115/154 (74.68%), Postives = 138/154 (89.61%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFP 154
            M+SPG+RRE D+MKL+MADYE++MA  D   EF+VKF GPK TPYEGGVWKVHVELP+AYPYKSPSIGF+N +YHPN+D+MSGSVCLDVINQ+WSPM+DL N+FEVFLPQLLTYPN  DPLNGEAAAL +REP+R++QKV E+V +YA+ ED+P
Sbjct:    1 MSSPGRRREMDIMKLVMADYEVEMASEDSNAEFYVKFRGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFVNAIYHPNIDQMSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLTYPNSQDPLNGEAAALHLREPQRFQQKVREFVNRYARDEDYP 154          
BLAST of Gcaud2210.t1 vs. uniprot
Match: M1VGP0_CYAM1 (Probable ubiquitin conjugating enzyme E2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VGP0_CYAM1)

HSP 1 Score: 259 bits (663), Expect = 1.040e-84
Identity = 114/154 (74.03%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFP 154
            M+SPG+RRE D+MKL+MADYE++MA+ D   EF+VKF GPK TPYEGGVWKVHVELP+AYPYKSPSIGF+N +YHPN+D+MSGSVCLDVINQ+WSP++DL N+FEVFLPQLLTYPN  DPLNGEAAAL +REP+R++QKV E+V +YA+ ED+P
Sbjct:    1 MSSPGRRREMDIMKLVMADYEVEMANEDSNAEFYVKFRGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFVNAIYHPNIDQMSGSVCLDVINQTWSPLFDLLNVFEVFLPQLLTYPNSQDPLNGEAAALHLREPQRFQQKVREFVNRYAREEDYP 154          
BLAST of Gcaud2210.t1 vs. uniprot
Match: A0A1Y1IJE8_KLENI (Ubiquitin-protein ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJE8_KLENI)

HSP 1 Score: 256 bits (654), Expect = 3.260e-84
Identity = 127/193 (65.80%), Postives = 150/193 (77.72%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKPEDFPTGDTANGEDDDDASNFSMSESEGEAADDILDDDEDGALA 193
            M+SP KRRE D+MKLMM+DY+++M + D + EFFV+F GPK +PYEGGVWK+HVELPDAYPYKSPSIGFINR++HPNVDE+SGSVCLDVINQ WSPM+DL N+FEVFLPQLL YPNPTDPLNGEAAAL MREP+ YK KV EY Q++AKPED                N    ESE E+ DD+ D  +D  +A
Sbjct:    1 MSSPSKRREMDVMKLMMSDYKVEMIN-DGMSEFFVEFLGPKESPYEGGVWKIHVELPDAYPYKSPSIGFINRIFHPNVDELSGSVCLDVINQRWSPMFDLINVFEVFLPQLLLYPNPTDPLNGEAAALLMREPDLYKSKVKEYCQRFAKPEDL--------------GNKPEPESEDESEDDLSDMSDDDEMA 178          
The following BLAST results are available for this feature:
BLAST of Gcaud2210.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMX4_9FLOR8.540e-13294.03Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Gracilar... [more]
R7QGH1_CHOCR2.110e-11087.08Ubiquitin-conjugating enzyme, E2 n=1 Tax=Chondrus ... [more]
A0A1X6P6P2_PORUM4.800e-9884.28UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A5J4YJ08_PORPP6.960e-9884.62Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Porphyri... [more]
R7QF75_CHOCR2.230e-9480.11UBC core domain-containing protein n=1 Tax=Chondru... [more]
M2Y2Q8_GALSU6.460e-9177.11Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
M2W4S3_GALSU3.840e-8771.95Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A7J7IEX2_9RHOD4.850e-8574.68Ubiquitin-conjugating enzyme E2 8 n=1 Tax=Cyanidio... [more]
M1VGP0_CYAM11.040e-8474.03Probable ubiquitin conjugating enzyme E2 n=1 Tax=C... [more]
A0A1Y1IJE8_KLENI3.260e-8465.80Ubiquitin-protein ligase n=1 Tax=Klebsormidium nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 3..149
e-value: 1.7E-47
score: 173.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..210
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..182
NoneNo IPR availablePANTHERPTHR24068:SF321UBIQUITIN-CONJUGATING ENZYME E2-23 KDAcoord: 3..182
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..156
e-value: 3.5E-47
score: 161.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..149
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..143
e-value: 4.2E-37
score: 126.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 3..149
score: 39.000435
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..144
e-value: 6.56236E-47
score: 149.275
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_492_length_23814_cov_5.019981contigNODE_492_length_23814_cov_5.019981:1517..2534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2210.t1Gcaud2210.t1Gracilaria caudata M_176_S67 malemRNANODE_492_length_23814_cov_5.019981 1517..2534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2210.t1 ID=Gcaud2210.t1|Name=Gcaud2210.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=211bp
MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVW
KVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDL
TNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVQKYAKP
EDFPTGDTANGEDDDDASNFSMSESEGEAADDILDDDEDGALAPLSVADE
KDLDGEAAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS