Gcaud2217.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2217.t1
Unique NameGcaud2217.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length76
Homology
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A2V3IMW9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMW9_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 1.830e-32
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    8 VYRPMEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKANMANPVAE 75
            + + MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKANMAN  AE
Sbjct:   29 IVKDMEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKANMANTAAE 96          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A1X6NJJ2_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJJ2_PORUM)

HSP 1 Score: 77.4 bits (189), Expect = 2.870e-17
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTK 66
            M+KLQ+L+  + AVSKDSTKFFE  NKAAGTRARK+LQELK LAQELRV IQ TK
Sbjct:    1 MDKLQELRNCIAAVSKDSTKFFEGNNKAAGTRARKHLQELKSLAQELRVLIQSTK 55          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A5J4Z6U9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6U9_PORPP)

HSP 1 Score: 75.9 bits (185), Expect = 3.000e-16
Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKAN 68
            M+KL +LK  ++ +  D+TKF+  GNKAAGTRARK+LQELK+LAQELRVAIQ+TKA+
Sbjct:    1 MQKLVELKSCVETIENDTTKFYSNGNKAAGTRARKHLQELKQLAQELRVAIQETKAH 57          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A1X6NTL1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTL1_PORUM)

HSP 1 Score: 71.6 bits (174), Expect = 1.200e-14
Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTK 66
            M+K+++L+  + AV KD+TKFFE  NKAAGTRARK+LQ+LK LAQELRV IQ TK
Sbjct:    1 MDKMEELRNCVAAVDKDATKFFEANNKAAGTRARKHLQQLKTLAQELRVLIQSTK 55          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A1M5DWH2_9BACT (Histone H1-like protein Hc1 n=5 Tax=Aliifodinibius TaxID=1397107 RepID=A0A1M5DWH2_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 1.800e-14
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKAN 68
            M +  +LK ++  V +D TKF+EKGNKAAGTRARK LQEL+KL+QE+R+ IQD K N
Sbjct:    1 MSRFDELKGIVTGVEEDMTKFYEKGNKAAGTRARKGLQELRKLSQEVRLEIQDIKNN 57          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A6A8Q4R0_9BACT (Histone H1 n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q4R0_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 5.160e-14
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKAN 68
            M +++++K ++D  + D  KF+EKGNKAAGTRARK LQ LKKLAQE+R+ IQD K N
Sbjct:    1 MSRVEEIKNLVDETALDMDKFYEKGNKAAGTRARKGLQNLKKLAQEIRLEIQDIKNN 57          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A6M1SSM9_9BACT (Histone H1 n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SSM9_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 7.330e-14
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTK 66
            M +   +K V++ V +D  KF+EKGNKAAGTRARK LQEL+KLAQE+R+ IQD K
Sbjct:    1 MSRFDDIKNVIEGVEEDMAKFYEKGNKAAGTRARKGLQELRKLAQEVRLEIQDIK 55          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A2V3IU42_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU42_9FLOR)

HSP 1 Score: 68.9 bits (167), Expect = 1.130e-13
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTK 66
            MEK  +L   ++ + +D++KFF  GNKAAGTRARK+LQELK+LAQ+LRV IQDTK
Sbjct:    1 MEKYSELARCVENIERDASKFFVNGNKAAGTRARKHLQELKQLAQDLRVLIQDTK 55          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A2D8CFC1_9BACT (Histone H1 n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CFC1_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 1.480e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTK 66
            M +++++K ++D  +++  KF+EKGNKAAGTRARK LQELKKLAQE+R+ IQ+ K
Sbjct:    1 MSRVEEIKNLLDETTEEMEKFYEKGNKAAGTRARKGLQELKKLAQEIRLEIQEIK 55          
BLAST of Gcaud2217.t1 vs. uniprot
Match: A0A2A2G865_9BACT (Histone H1 n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2G865_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 2.980e-13
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0
Query:   12 MEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQELKKLAQELRVAIQDTKAN 68
            M + +++  ++  +  D TKF+EKGNKAAGTRARK LQ LKKLAQE+R+ IQD K N
Sbjct:    1 MSRFEEITNIITGIEDDMTKFYEKGNKAAGTRARKGLQGLKKLAQEVRLEIQDIKNN 57          
The following BLAST results are available for this feature:
BLAST of Gcaud2217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMW9_9FLOR1.830e-3291.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NJJ2_PORUM2.870e-1776.36Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A5J4Z6U9_PORPP3.000e-1666.67Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A1X6NTL1_PORUM1.200e-1467.27Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1M5DWH2_9BACT1.800e-1461.40Histone H1-like protein Hc1 n=5 Tax=Aliifodinibius... [more]
A0A6A8Q4R0_9BACT5.160e-1459.65Histone H1 n=1 Tax=Balneolaceae bacterium TaxID=20... [more]
A0A6M1SSM9_9BACT7.330e-1461.82Histone H1 n=1 Tax=Balneolaceae bacterium YR4-1 Ta... [more]
A0A2V3IU42_9FLOR1.130e-1363.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2D8CFC1_9BACT1.480e-1358.18Histone H1 n=2 Tax=Balneolaceae TaxID=1813606 RepI... [more]
A0A2A2G865_9BACT2.980e-1357.89Histone H1 n=1 Tax=Aliifodinibius sp. WN023 TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_492_length_23814_cov_5.019981contigNODE_492_length_23814_cov_5.019981:17929..18548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2217.t1Gcaud2217.t1Gracilaria caudata M_176_S67 malemRNANODE_492_length_23814_cov_5.019981 17929..18548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2217.t1 ID=Gcaud2217.t1|Name=Gcaud2217.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=76bp
LRPPCSDVYRPMEKLQQLKEVMDAVSKDSTKFFEKGNKAAGTRARKNLQE
LKKLAQELRVAIQDTKANMANPVAE*
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