Gcaud2211.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2211.t1
Unique NameGcaud2211.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length656
Homology
BLAST of Gcaud2211.t1 vs. uniprot
Match: A0A2V3IQL3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQL3_9FLOR)

HSP 1 Score: 780 bits (2014), Expect = 9.810e-276
Identity = 401/643 (62.36%), Postives = 480/643 (74.65%), Query Frame = 0
Query:   11 PPSPPRHAPPPPQPRGAFILSLWIPFDVWSRIAAYLTSVSDLNSFLKVCRAAYNAVCTTQAPFHKSVCHHFRRCQFYIPADLVDKVLMAHVVPPDGKSLVIFLDETQSGNGVELAWIRDTHIRRVQLGLDTVSASTVSNIRFSPDGSRIAFLITLAHGNLIAEDIDPLHRLRGWESHTEIRGQPHDVSYEPCEDCTVQIVSLVSDSLGYPNDLIVHTFTHVFVPEYGFDMVWRGTTQKPELAFAAMLHSTAGAATYLVRWKTFASPAETNFVFMACIDGASIELLHDKRSAMLNYESTRCTSRIELGKDAQFIFFDTISKFGVLRFDQVENAESAKVTRADLPNDPIVS-RACCAPSAMKPGTREQHN------RREEESSTEKSDVCHLQAHDG--------------GEHSHFHNDEVARTSRMAPNGKLLCSVVCVHCGPHGRNGKRISQRHIEMRSSVSGRLLYRQLIPRTFNTSRHRMKRIRIPYEKSDHVTRNTIGFSEDSRLLVIWDTLFTNVQVVASKRLPHVYEAETGRLVQDFNEIASTVSYDQVQTAPDVLTFYGTRWTKGKVIMDAIDVVSGRVLKTEVLADGFGAAAQFSSDSVYILPNQNLVATSRGKLDSFWETTRGALGCGWRSERR 632
            PPSPPRH     QPRGAFI S WIPFD+W RIA+Y+TS+SDL SFL VCRAA  AVC TQAP H+SV H+FR C FYIP DL+DKV M HVVPP G+SL++F+D+  S NGV+LAW+R + +RR+ LGLD V ASTV+NIRFSPDG+RIAFLITLAHG LIAE +DPLHRLRGWES TEI G+  D++  PCEDCTVQI  L +D LG+P+DL++HTFTHVFVPEYGFDMVWRGT+ KPELAFAAMLHS+AGAATYLVRWKTFASP E+NFVFMA IDGASI+L+HDKR AML+Y+STRCTSRIE+G+DAQ IFFDT SKFGVLRFDQV++A S++VTRADLPN+P ++ R+ CA   M+P   EQ +      R      T +      Q H G              G+     + +VARTSRM+P+G LLCSV+C       ++G+R   R IEMRS+++GRLLYR  IPR   T R   K    P+EKSD+V R TI FS DSRL++IWDT F++V V  SKRLP+VYE ETGRLVQDF  I ST++YDQVQTAPD LT YGTR ++ +++MDAIDV+SG VLKTE L         F+   V+  PNQ L   SRG LD+ WETTRG LGCGW+SERR
Sbjct:   13 PPSPPRHNRASSQPRGAFISSHWIPFDIWPRIASYITSISDLTSFLHVCRAAQKAVCLTQAPRHQSVRHNFRLCTFYIPTDLLDKVRMVHVVPPHGESLILFVDDPSSSNGVDLAWLRGSRLRRISLGLDAVPASTVTNIRFSPDGTRIAFLITLAHGALIAEGLDPLHRLRGWESQTEIFGETFDITCHPCEDCTVQIADLEADDLGFPHDLVLHTFTHVFVPEYGFDMVWRGTSDKPELAFAAMLHSSAGAATYLVRWKTFASPNESNFVFMAVIDGASIDLIHDKRHAMLSYKSTRCTSRIEIGEDAQIIFFDTTSKFGVLRFDQVDDAASSRVTRADLPNNPFINPRSSCA-MGMEPQYSEQGDSSRGLHRVRTVQRTYREGCLSKQLHAGNSLTNRTSGRARARGDDMGSPDHDVARTSRMSPDGMLLCSVICNPNARIFKSGRRSPHRLIEMRSTLTGRLLYRHHIPRPRRTLRI-PKHDSTPFEKSDYVARRTITFSNDSRLVLIWDTYFSSVVVSTSKRLPYVYEVETGRLVQDFCAIGSTIAYDQVQTAPDALTVYGTRVSRNRIVMDAIDVLSGLVLKTEPLTGDLMVPTCFAGHFVFTFPNQKLAIMSRGWLDTLWETTRGYLGCGWKSERR 653          
BLAST of Gcaud2211.t1 vs. uniprot
Match: R7QGL7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGL7_CHOCR)

HSP 1 Score: 517 bits (1331), Expect = 1.870e-173
Identity = 281/611 (45.99%), Postives = 382/611 (62.52%), Query Frame = 0
Query:   26 GAFILSLWIPFDVWSRIAAYLTSVSDLNSFLKVCRAAYNAVCTTQAPFHKSVCHHFRRCQFYIPADLVDKVLMAHVVPPDGKSLVIFLDETQSGNGVELAWIRDTHIRRVQLGLDTVSASTVSNIRFSPDGSRIAFLITLAHGNLIAEDIDPLHRLRGWESHTEIRGQPHDVSYEPCEDCTVQIVSLVSDSLGYPNDLIVHTFTHVFVPEYGFDMVWRGTTQKP---ELAFAAMLHSTAGAATYLVRWKTFASPAETNFVFMACIDGASIELLHDKRSAMLNYESTRCTSRIELGKDAQFIFFDTISKFGVLRFDQVENAESAKVTRADLPNDPI--VSRACCAPSAMKPGTREQHNRREEESSTEKSDVCHLQAHDGGEHSHFHN--DEVARTSRMAPNGKLLCSVVCVHCGPHGRNGKRISQ-RHIEMRSSVSGRLLYRQLIPRTFNTSRHRMKRIRIPYEKSDHVTRNTIGFSEDSRLLVIWDTLFTNVQVVASKRLPHVYEAETGRLVQDFNEIASTVSYDQVQTAPDVLTFYGTRWTKGKVIMDAIDVVSGRVLKTEVLADGFGAAAQFSSDSVYILPNQNLVATSRGKLDSFWETTRGALGCGWR 628
            GA     WIP DVW+R++A++  V   ++   VC AA   V   +A F +++   FR   + +P  L D+VLM H +   G+ LV+F+DET  G+GVE+AW++   ++ + LGL+ V AS  +NIRF+PDG  +A L+TLAHG ++ E+ DPL RLRGW    +       + Y PCEDCTVQ+V  +    G   DL++HTF+HVFVPEYGFDMVWRG+  K    ELAFAAMLHS  GAATYLVRWKTF +P  +NF+FMACIDGA  E+L DKR+AML    T CTSRIEL KDA+ IFFDT+SKFG+LRFDQV+N   AKVTRADL N PI  V RA   P   + G  E    R+  S T    +    A  G          +   R +RM+P+G LLCSV+        R G R ++ +H+EMRSS+ GRLL+R +I R  +    +  R+ +  EKS  +  NT+ FS+DS LLV+WD   T+        LP V ++ TG  +QDF E++S V Y+ +Q + D    YGTR  + +++MDA+DV++GRVLKT  +         FS+ SVY++PN+ +   +RG+L+  WE++RG+ GCGWR
Sbjct:    7 GARACGQWIPADVWARLSAFVRDVPAQHALRLVCPAAAAGVADARAAFLQTLRKTFRLRAYSLPDSLADRVLMVHPMAGGGEGLVLFVDETDIGSGVEIAWLQSGSLKSIALGLEAVPASAATNIRFAPDGRSVAMLVTLAHGTMVEENTDPLKRLRGWPVVEDC------IEYTPCEDCTVQVVDFLYPERGRSRDLVLHTFSHVFVPEYGFDMVWRGSAGKSDRQELAFAAMLHSDDGAATYLVRWKTFRNPRTSNFIFMACIDGACKEMLWDKRNAMLRSPHTICTSRIELAKDARHIFFDTMSKFGILRFDQVDNPSVAKVTRADLDNTPISPVLRAPPLPKIAR-GRHEACCHRDSPSGTPVPKMRPSFATYGDHQRRAAKVLNNATRIARMSPDGSLLCSVIDTFRSNGERRGLRSTRLKHVEMRSSLCGRLLFRNVIVRQPDLCCQKPDRLEL--EKSGDIAHNTLSFSDDSSLLVVWDAFLTSTVCEVYHTLPLVLDSRTGGTIQDFEELSS-VRYEGMQMSSDGQIIYGTRMAEDRIVMDAVDVLTGRVLKTVNVTGQVHRPPAFSAHSVYLMPNRYIHTVARGQLEVLWESSRGSAGCGWR 607          
The following BLAST results are available for this feature:
BLAST of Gcaud2211.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQL3_9FLOR9.810e-27662.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGL7_CHOCR1.870e-17345.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_492_length_23814_cov_5.019981contigNODE_492_length_23814_cov_5.019981:3192..5159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2211.t1Gcaud2211.t1Gracilaria caudata M_176_S67 malemRNANODE_492_length_23814_cov_5.019981 3192..5159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2211.t1 ID=Gcaud2211.t1|Name=Gcaud2211.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=656bp
MIRDDNNDLDPPSPPRHAPPPPQPRGAFILSLWIPFDVWSRIAAYLTSVS
DLNSFLKVCRAAYNAVCTTQAPFHKSVCHHFRRCQFYIPADLVDKVLMAH
VVPPDGKSLVIFLDETQSGNGVELAWIRDTHIRRVQLGLDTVSASTVSNI
RFSPDGSRIAFLITLAHGNLIAEDIDPLHRLRGWESHTEIRGQPHDVSYE
PCEDCTVQIVSLVSDSLGYPNDLIVHTFTHVFVPEYGFDMVWRGTTQKPE
LAFAAMLHSTAGAATYLVRWKTFASPAETNFVFMACIDGASIELLHDKRS
AMLNYESTRCTSRIELGKDAQFIFFDTISKFGVLRFDQVENAESAKVTRA
DLPNDPIVSRACCAPSAMKPGTREQHNRREEESSTEKSDVCHLQAHDGGE
HSHFHNDEVARTSRMAPNGKLLCSVVCVHCGPHGRNGKRISQRHIEMRSS
VSGRLLYRQLIPRTFNTSRHRMKRIRIPYEKSDHVTRNTIGFSEDSRLLV
IWDTLFTNVQVVASKRLPHVYEAETGRLVQDFNEIASTVSYDQVQTAPDV
LTFYGTRWTKGKVIMDAIDVVSGRVLKTEVLADGFGAAAQFSSDSVYILP
NQNLVATSRGKLDSFWETTRGALGCGWRSERRRAPFCSRYDSMVRRKQPT
ITEMS*
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