Gcaud8014.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8014.t1
Unique NameGcaud8014.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length242
Homology
BLAST of Gcaud8014.t1 vs. uniprot
Match: R7QN93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN93_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 3.610e-18
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0
Query:   98 VYSQPLT---------PKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQE 168
            VY+QP T         PKK+RLQWTPELH+KF  AV++ G++ AVPK LL+A+N P LTRENVASHLQK+RE +RK+K E
Sbjct:  579 VYAQPATVHYITPPPAPKKKRLQWTPELHAKFEDAVNEIGLEAAVPKTLLQAINEPTLTRENVASHLQKFREMIRKRKLE 658          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A090MAV9_OSTTA (Myb domain, plants n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MAV9_OSTTA)

HSP 1 Score: 86.7 bits (213), Expect = 3.360e-17
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:  106 KKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQELDSSGNHVRTDG 180
            K+ RL WTP LH++FV AV++ G+D AVPK +++ MNV GLTRENVASHLQKYR NL++KK   +S+     TDG
Sbjct:   72 KRARLVWTPALHAQFVAAVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKRKKFSSESTEGLDDTDG 146          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A2U1LYS4_ARTAN (CheY-like superfamily, Signal transduction response regulator, PEP-CTERM system n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LYS4_ARTAN)

HSP 1 Score: 88.6 bits (218), Expect = 9.760e-17
Identity = 44/60 (73.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:  105 PKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRK 164
            PKK R+ WTPELH KFV+AV   GI +AVPK LL  MNVPGL RE+VASHLQKYR NLRK
Sbjct:  213 PKKNRIAWTPELHEKFVRAVTILGIQNAVPKKLLELMNVPGLRRESVASHLQKYRLNLRK 272          
BLAST of Gcaud8014.t1 vs. uniprot
Match: UPI001CB8E6E2 (two-component response regulator ORR21-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8E6E2)

HSP 1 Score: 85.1 bits (209), Expect = 8.330e-16
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0
Query:  106 KKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQELDSS 172
            KK+R+ WT ELH  FV+AV Q GID+AVPK +L  MNVPGL RENVASHLQKYR +L+K K+ +  S
Sbjct:  197 KKQRMVWTDELHLLFVRAVKQLGIDNAVPKKVLELMNVPGLRRENVASHLQKYRLSLKKLKEHMPES 263          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A2N9II98_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9II98_FAGSY)

HSP 1 Score: 85.9 bits (211), Expect = 1.270e-15
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0
Query:  104 TPKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKK 166
            T KK RL WTP+LH KF+ A+ + G D+AVP  +L+ MNVPGLTRENVASHLQKYR  L+K+K
Sbjct:  173 TRKKSRLSWTPQLHLKFLNAIQELGDDEAVPNNILKIMNVPGLTRENVASHLQKYRNILKKQK 235          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A8B8MJ70_ABRPR (Two-component response regulator n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MJ70_ABRPR)

HSP 1 Score: 85.5 bits (210), Expect = 1.970e-15
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0
Query:  101 QPLTPKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQE 168
            +PL  KK RL W  ELHSKFV AV+Q GID A PK +L  MNV GLTRENVASHLQKYR +L+K  Q+
Sbjct:  202 EPLNQKKPRLVWAAELHSKFVAAVNQLGIDKAFPKRILDLMNVEGLTRENVASHLQKYRLSLKKPTQQ 269          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A2J6LPE3_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6LPE3_LACSA)

HSP 1 Score: 84.0 bits (206), Expect = 2.110e-15
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
Query:  106 KKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRK 164
            KK+RL WT ELH +F+ AV+Q G ++AVPK +L  MNVPGLTRENVASHLQKYR NL+K
Sbjct:  193 KKQRLVWTDELHQQFLDAVEQLGNNNAVPKKVLELMNVPGLTRENVASHLQKYRLNLKK 251          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A5B8MGD7_9CHLO (HTH myb-type domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGD7_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 2.600e-15
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 0
Query:  100 SQPLTPKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQE 168
            S  +  K+ RL WT +LH +FV+AV++ G+D AVPK ++++MNV G+TRENVASHLQKYR  L+K+  E
Sbjct:   91 SMQMAMKRPRLIWTRQLHERFVEAVNKMGVDQAVPKAIMQSMNVKGITRENVASHLQKYRAQLKKRSAE 159          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A8B8JIQ4_ABRPR (Two-component response regulator n=3 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JIQ4_ABRPR)

HSP 1 Score: 85.1 bits (209), Expect = 2.660e-15
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0
Query:  104 TPKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRK 164
            T KK+R+ W+ ELH +FV AVDQ GID AVPK +L  MNVPGLTRENVASHLQKYR  LR+
Sbjct:  201 TLKKQRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRR 261          
BLAST of Gcaud8014.t1 vs. uniprot
Match: A0A2I0KCP5_PUNGR (two-component response regulator ARR2-like n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0KCP5_PUNGR)

HSP 1 Score: 84.7 bits (208), Expect = 3.020e-15
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0
Query:  103 LTP-KKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTRENVASHLQKYRENLRKKKQE-LDSSGNHVRTDGSPEDSEVHG 189
            LTP KK+R+ W   LH +FV AV   GI++AVPK +L  MNVPGLTRENVASHLQKYR++ +KK QE L+S+   + +DG+ +  E+ G
Sbjct:  207 LTPMKKQRVVWDSALHDQFVSAVTYLGINEAVPKKILELMNVPGLTRENVASHLQKYRQHQKKKAQESLESTFGPMSSDGNLDLHELIG 295          
The following BLAST results are available for this feature:
BLAST of Gcaud8014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN93_CHOCR3.610e-1861.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A090MAV9_OSTTA3.360e-1758.67Myb domain, plants n=2 Tax=Ostreococcus tauri TaxI... [more]
A0A2U1LYS4_ARTAN9.760e-1773.33CheY-like superfamily, Signal transduction respons... [more]
UPI001CB8E6E28.330e-1664.18two-component response regulator ORR21-like n=1 Ta... [more]
A0A2N9II98_FAGSY1.270e-1565.08Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A8B8MJ70_ABRPR1.970e-1566.18Two-component response regulator n=1 Tax=Abrus pre... [more]
A0A2J6LPE3_LACSA2.110e-1569.49Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A5B8MGD7_9CHLO2.600e-1555.07HTH myb-type domain-containing protein n=1 Tax=Chl... [more]
A0A8B8JIQ4_ABRPR2.660e-1570.49Two-component response regulator n=3 Tax=Abrus pre... [more]
A0A2I0KCP5_PUNGR3.020e-1555.06two-component response regulator ARR2-like n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..175
NoneNo IPR availableGENE3D1.10.10.60coord: 104..165
e-value: 1.5E-28
score: 100.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..209
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 107..160
e-value: 2.0E-22
score: 77.2
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 110..159
e-value: 1.3E-7
score: 31.7
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 104..163
score: 14.706574
IPR044841Transcription factor LUX/BOA-likePANTHERPTHR31442HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 105..185
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 104..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:3389..4300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8014.t1Gcaud8014.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 3389..4300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8014.t1 ID=Gcaud8014.t1|Name=Gcaud8014.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=242bp
MRSAPPGPAYYVYPPAPSQYVTHPAYYAPNYTYSTLPQHQPRPLHDPGAD
ARPPQALQTPAMTLSHTPVPQSMPAGASQQQTPLMTVPLYVNMPQFPVYS
QPLTPKKRRLQWTPELHSKFVKAVDQYGIDDAVPKLLLRAMNVPGLTREN
VASHLQKYRENLRKKKQELDSSGNHVRTDGSPEDSEVHGERSRDKAREQK
CKQNDMPIGSPSFEEAEILRVSNVSVAVICLFDHAVHPLRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR044841LUX/BOA-like
IPR009057Homeobox-like_sf