Gcaud7471.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7471.t1
Unique NameGcaud7471.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length530
Homology
BLAST of Gcaud7471.t1 vs. uniprot
Match: A0A2V3IT62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT62_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 5.840e-52
Identity = 183/534 (34.27%), Postives = 257/534 (48.13%), Query Frame = 0
Query:    1 MKGWMGGKRRHIAVRRRDPNARQREIFARRRQLARQSL-PRGQKTGAQMNMENGPGRPPXXXXXXXXXXXXXXQNALRSGTRRDPKQPFQYSKDIVMFGDASGLESIVPEYRHARKRFRDRAAREERESKR---RREAKIEEPVDAFSS--SYPSQDIRIFDADDEKTPLFRRRTLPHNFLNSEDTTRHRTSKHFAKETVPLPKRHKVSTTPDLINRFSGLQFSPLRRIEGFRRVVKESSNTRGEVTKPFLRHERNPPLPESPSDKFDEIRTGFVDDGRSLRVPQERFERPEVVSGLVPDGIDNLTRRRISESPERVKTSPLRWKDIDLESRSQSPVLPAKHVDAFHSIENTRLESRFPLIEAESESPPLLSPDKKEQESPVIGFRSLLAYEPITPDYFSAEVHVLEAKMFERPDSDGRRFRVRRKLQRRDPCEEVGHGSTRERDLRTNAGIKGGNSESEVNREMLSSTKDVKDVRLEVRTGEGKICTNDSIVAEPEKSNHGI------------VDVTLIRTEQNPVHAARSK 516
            MKGWMGGKRR + V+RRDP ARQR+ FAR R++A+QS  P  +       M N P   P              +N  RS   +  K     S+D +M  D S LES+VPE+R+ARKR RD   R  R  KR    RE + ++ V A  S  S+PS  IRIFDAD+EKTP FRRR LP+NFLNS+ T + +++   ++   P P++ K   +     + + L F P        R ++  S    + +           LP +  D F   R    ++ R L     R  RP   S  +P    +   RRI E+PE V  + +R        +S +P    +       +    L +RFP +EA S+S  LLS  + EQE     FRSLLA E I PD FSAEV  +E K+   PD+D R FRVR    RR     +  GS RE +     GI+ G   ++   + L+   D     L V    G+ C++   V + E ++  +            V++ LI TE+NP+  AR +
Sbjct:    1 MKGWMGGKRRRVVVQRRDPVARQRQYFARMREIAQQSHHPAERSAHVNATMLNAPRHRPALRPAQRSRPPENPRNLQRS---QASKWQQDISRDFLMLADPSDLESLVPEFRNARKRNRDIEDRVNRHRKRLATTREGREDDLVRADQSQPSFPSHTIRIFDADEEKTPHFRRRVLPNNFLNSQVTNK-QSAPIRSRGNSPRPRQLKNLPSSSRKRKANDLDFVPSLPANFHERNIRHDSLGVSKASPKMSDLHPGSALPSNAIDFFAHRRADG-ENRRPLVQASPRRMRPHARSSDIPL---HYMERRIPETPEFVAGTVVRESH-----QSHTPRHREEFSTQLDHMLGMSLGTRFPAVEAGSDSSSLLSRRQFEQEHKT--FRSLLADEEIKPDDFSAEVQQIEMKILGEPDNDIRTFRVR---NRRTAKRVL--GSEREIEY----GIRKGRGRNQFGPKSLNKD-DPTVYELGVGVASGEKCSDGRNVCDTENTDIDMEDTERESYDAKDVEIELITTERNPIQHAREQ 509          
The following BLAST results are available for this feature:
BLAST of Gcaud7471.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT62_9FLOR5.840e-5234.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_477_length_24373_cov_4.435714contigNODE_477_length_24373_cov_4.435714:16032..17685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7471.t1Gcaud7471.t1Gracilaria caudata M_176_S67 malemRNANODE_477_length_24373_cov_4.435714 16032..17685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7471.t1 ID=Gcaud7471.t1|Name=Gcaud7471.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=530bp
MKGWMGGKRRHIAVRRRDPNARQREIFARRRQLARQSLPRGQKTGAQMNM
ENGPGRPPRPPASHIPRTPQAPQNALRSGTRRDPKQPFQYSKDIVMFGDA
SGLESIVPEYRHARKRFRDRAAREERESKRRREAKIEEPVDAFSSSYPSQ
DIRIFDADDEKTPLFRRRTLPHNFLNSEDTTRHRTSKHFAKETVPLPKRH
KVSTTPDLINRFSGLQFSPLRRIEGFRRVVKESSNTRGEVTKPFLRHERN
PPLPESPSDKFDEIRTGFVDDGRSLRVPQERFERPEVVSGLVPDGIDNLT
RRRISESPERVKTSPLRWKDIDLESRSQSPVLPAKHVDAFHSIENTRLES
RFPLIEAESESPPLLSPDKKEQESPVIGFRSLLAYEPITPDYFSAEVHVL
EAKMFERPDSDGRRFRVRRKLQRRDPCEEVGHGSTRERDLRTNAGIKGGN
SESEVNREMLSSTKDVKDVRLEVRTGEGKICTNDSIVAEPEKSNHGIVDV
TLIRTEQNPVHAARSKRLADDHKQASKTV*
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