Gcaud2507.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2507.t1
Unique NameGcaud2507.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length495
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2507.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..494
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..407
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 408..430
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 93..112
NoneNo IPR availableTMHMMTMhelixcoord: 408..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_441_length_25217_cov_4.561570contigNODE_441_length_25217_cov_4.561570:12524..14008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2507.t1Gcaud2507.t1Gracilaria caudata M_176_S67 malemRNANODE_441_length_25217_cov_4.561570 12524..14008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2507.t1 ID=Gcaud2507.t1|Name=Gcaud2507.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=495bp
MPLIINVRSGIISGIFEAIALLILAPIITRGTAQIYNLMATRRILTGHQV
RICDDSMSVEDIIPRAINLIRTVGSRKPTLRSNISTGIRRQCVTLLISLV
MSLGILLLSVFTDGKTVRTYEMRDLFIWNNATFVDTTPSTGLDSKACDVL
GMFGVRLACINRTDTNSFNMYAVGFYEVQNFEQGRSANGSVCLDGERTKE
RQGIFLSTNRIFSPPEDPARKEDMEGEPAQFTFVRSIDRVRAPDYCRVLV
TTETSSEEWTLSSEDPVGKTRFAVRAMRRNDSNMIIVKVGVAYHFLDIDE
VETELGLEGEDCDAISTTMFANNRFTAEITEIGVTLNLTHLELTVADMLF
WIVQSGYRHIESQAIMLRAYYAGTFDDSEQDNEPLGTFIPRRVAVATGAQ
QVTELSPLAIVGAVLTGFGTMLLLGAAVCLRPQVRLTSSTYVSKLYVNNV
CENGERGVNDWDYVEAFDGDGADVVVRPVSLRCNTAKDCESDFT*
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