Gcaud2439.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2439.t1
Unique NameGcaud2439.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length582
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2439.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..405
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..482
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 483..505
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 506..581
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availableTMHMMTMhelixcoord: 483..505
NoneNo IPR availableTMHMMTMhelixcoord: 102..119
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_42_length_67898_cov_4.520993contigNODE_42_length_67898_cov_4.520993:29436..31181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2439.t1Gcaud2439.t1Gracilaria caudata M_176_S67 malemRNANODE_42_length_67898_cov_4.520993 29436..31181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2439.t1 ID=Gcaud2439.t1|Name=Gcaud2439.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=582bp
MSDIVSIENMSDVSDTIVLQRPRGSFSGIPDFVIHIDEPVWNVILYICLN
LIALPFLEYLSDRLVRKTASMKLLNKEKVLLSDSRLGILSLYSTYYGRHR
NILPMIFLGFVVIVMETFAEFCSSSIELSEKTQIDVWKIRETHTFSHIHG
ELPSERNSTTLQGGMDNRLRLENVSLREDRVESVLHSKDCIFGVEDLVLR
LNESGSTNGFEPVLREHYMLAKLSSSKMYLSRDNSSIVCDYFRSKPREVE
VWMPAVSEENGTYFTRAAQNIALRTNSRPPINWSRRVRLGNSVHAVYGFR
NGRQAANKSHADAYTCVQLYEGDDCGDSCESVACAIYAIRNRTETFGFGE
GSVVSNEDGQIADVKRWRLESKSRANQDEKEVEKKEEKKEEKKEKKKEKE
KEGKNGSNLDPLSELTVRFAMRMYLEGYLWATENEEVEKRRVVTMARYVQ
SISGESLVNGELRELDSRFIQPRPDLVRQVPTVTVLAVIPWSLFLLIVMV
QLLLLRRLERKIRVTKTMRGVKKGAAKVETSMQWFRRDFVKLLSENGFNA
ELNDISLRLESVGGKRRLNILHNLDASSKQP*
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