Gcaud2449.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2449.t1
Unique NameGcaud2449.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length501
Homology
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A2V3IVQ1_9FLOR (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ1_9FLOR)

HSP 1 Score: 544 bits (1402), Expect = 1.900e-186
Identity = 307/531 (57.82%), Postives = 362/531 (68.17%), Query Frame = 0
Query:    1 MLLLLLILPVATAVIITAPEACGGSRVVKHSTAFFGPSADASAVANCNVPLFPPRAQRDGVYVRLMSRLGRKHVHTLRSAAKSLFVGMVFGRAPDSVPLSDAPP--QIPLLEAAAISVRARTTSDAWKNDPKAPLPTVGPTKSPVPSSHLRQIAHSA-PSYQFIASAPREHIHAQESPSAELSAFALFDACCQLSVPADLQAVKGTIAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQTKTNPEINIPAVMIRYRDWARIAPCWNETNVIFTSEGEAKGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPET------------------------PPIPPIANKPVTSPAPSSSVMDHR--AERVSLVHSESQAGPSSP--PPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMHIS 500
            MLLLLL LPV  A+++ APE+CGG RV+KH+ A FG   D  A  N +  +F PR QRDG Y+R+        + TL SAA SLF+ M+FGRAPD++ ++D PP  QI LLE +A+S R R  +  W ++P AP  +V P +     S L  IA    PS    A+A R + +   SPS + S   L+DACCQLSV ADLQA++G +AVV RGVCDFAQK+  MQDAGA GVIVVNFKDEGDHLANMKLN+TK +P I IPAVMIRYRDWA IAPCWN+T V FT++GEAKGD+  D LNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETY   +H   S   +E   LL++TSEPET                          +  I NK    PAPS+         ++ +   +ESQ G SS   P L+S      T P E+AESE+EEPICAVCLEEFE GQQVR LACSHLYHR+CIDPWLQSSSNSCPLCKREIP+LPPPP Q HYGSM +S
Sbjct:  109 MLLLLLALPVVAAILVKAPESCGGERVIKHANALFGLKPDDPAFNNRDFAIFAPRPQRDGAYIRINPVSRPSAISTLHSAATSLFIAMLFGRAPDTIRVTDPPPPPQISLLEPSALSARVRRANPPWNSNPAAPRASVAPHRQT--QSLLETIASFGDPS----ATASRSNTNRPPSPSLDPSPSPLYDACCQLSVTADLQAIQGRVAVVTRGVCDFAQKIGFMQDAGAQGVIVVNFKDEGDHLANMKLNETKQDPHITIPAVMIRYRDWAEIAPCWNDTIVTFTAKGEAKGDHARDNLNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYQHRNHRDQSV-PEERAHLLSDTSEPETNXXXXXXXXXXXXXXXXXXXXXXXXXVQSIPNKSAAGPAPSTPXXXXGPPTDQPNRTRTESQPGSSSAHAPQLLSP-----TRPPEDAESEEEEPICAVCLEEFEPGQQVRQLACSHLYHRTCIDPWLQSSSNSCPLCKREIPSLPPPPAQFHYGSMLVS 627          
BLAST of Gcaud2449.t1 vs. uniprot
Match: R7Q8Z4_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Z4_CHOCR)

HSP 1 Score: 313 bits (803), Expect = 4.530e-101
Identity = 168/282 (59.57%), Postives = 199/282 (70.57%), Query Frame = 0
Query:  221 MQDAGALGVIVVNFKDEGDHLANMKLNQTKT-NPEINIPAVMIRYRDWARIAPCWNETNVIFTSEGEAKGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAERVSLVHSESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMHI 499
            MQDAGA+GVIVVN KD  D LANMK+N TK  + ++ IPAVMI + DW  I PC N+T V FT+EGEA  D  +G DALNW MMRGMALWILCQCGVNVVRYKRR+SE+RARADAIAALPVETY     S+P    D+ T +  E+S  +      I    V  PAP+S ++DH  ER  L+ S      ++          +STA  +E + E+EE +CAVCL+ FE+GQQVR LAC HLYHR CIDPWLQSSSN CPLCKRE+PNLPPPPTQLHYGSM +
Sbjct:    1 MQDAGAVGVIVVNRKD-ADKLANMKVNDTKELSTQVTIPAVMISHHDWNTILPCRNDTKVAFTAEGEASFDIDFGRDALNWTMMRGMALWILCQCGVNVVRYKRRMSEFRARADAIAALPVETY-----SRPENMHDDDTSVAEESSHTDQCVTESIPAPKVAGPAPTSPILDHDPERAGLIASSDGESVAAXXXXXXXXXXASTAFEDERDGEEEESVCAVCLDNFETGQQVRFLACGHLYHRVCIDPWLQSSSNCCPLCKREVPNLPPPPTQLHYGSMSV 276          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A5J4YWS7_PORPP (E3 ubiquitin-protein ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWS7_PORPP)

HSP 1 Score: 263 bits (671), Expect = 4.130e-79
Identity = 187/508 (36.81%), Postives = 245/508 (48.23%), Query Frame = 0
Query:   13 AVIITAPEACGGSRVVKHSTAFFGPSADASAVANCNVPLFPPRAQRDGVYVRLMSRLGRKHVHTLRSAAKSLFVGMVFGRAPDSVPLSDAPPQIPLLEAAAISVRARTTSDAWKNDPKAPLPTVGPTKSPVPSSHLRQIAHSAPSYQFIASAPREHIHAQESPSAELSAFALFDACCQLSVPADLQAVKGTIAVVARGV--CDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQTKTNPEINIPAVMIRYRDWARIAPCW-NETNVIFTSEGEAKGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQ----------------DESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAERVSLVHSESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMHI 499
            A+++ APE CGG+ V  H++A FGPS    ++    V LF PR Q  G YV   S                          PD     D        EA  +        D  +                      R  AH        A A  + + A  SPS       LFD C  LSV  D+   K  + V+ RG   CDF +KVR+MQ  GA GVI+VN++ +GD L NMKLN T  +  I IP++M+ +R+WA++APC  N  +V F++EGEA  D  YG +ALNWAMMRGMALWI  QCGVN+VR KRR SE  AR DAI ALPV TY +   +  SA                  D  +    +  +          N              H  ER  L       GPS   P V    +S   P + ++ +++EP+CA+C++ FE G QVR L CSH+YH++CIDPWL  SS +CP+CKREIPNLPP      YGS+++
Sbjct:   21 ALVVHAPEKCGGAHVATHASALFGPSTHDGSLHG--VRLFAPRPQNRGKYVTSSSE------------------------GPDD----DG-------EAGGVD-----EEDGLR----------------------RSAAH--------AGALTKSLSASSSPSKPSKETELFDGCKPLSVEKDIALAKDAVVVLVRGPGPCDFERKVRNMQKVGARGVIIVNYQSQGDRLVNMKLNNTSKSDTITIPSLMVLWREWAQLAPCRENNISVSFSAEGEAAFDFDYGREALNWAMMRGMALWIFFQCGVNMVRLKRRHSELTARVDAIEALPVRTYTKRRTTSASAXXXXXXXXXXXXXATCLADGGSYAAADARK---------GNTSAXXXXXXXXXXXHGTERTRL------RGPSQEQPDVPVTQNSVRLP-QTSDEDEDEPMCAICIDNFEEGDQVRELECSHIYHKACIDPWLYQSS-TCPVCKREIPNLPPTAANA-YGSLNV 438          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A7S1TLM0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLM0_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 1.260e-42
Identity = 103/236 (43.64%), Postives = 130/236 (55.08%), Query Frame = 0
Query:  267 WARIAPCWNETNVIFTSEGEAKGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAER-VSLVHSESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMHI 499
            WA  A   +   V  T+ GEA  D  YG DALNWAMMRGMALWIL QCGV++VR KRR SE  ARA AI  +PV T+ R       +    S PL T                 V      +   +  +E    +V + S AG         A   S+ A     + E + P+CAVCLEEFE G  +R LAC+H+YH+ CIDPWL  SS +CP+CKREIPNLPPPP+   YG++++
Sbjct:    8 WAGAAN--SNVTVSMTAAGEASFDLDYGRDALNWAMMRGMALWILFQCGVSIVRLKRRHSEMTARATAIQNMPVCTFSRPPRVFTRSVPRGSEPLATFDH--------------VGGSGGGAGTAEGGSELDAEVVPTASHAGDDGRRAAAGATVISTGA---NTDDEDDAPVCAVCLEEFEDGDLLRQLACTHMYHKECIDPWLAQSS-ACPVCKREIPNLPPPPSLNAYGALNV 223          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A7S0BJD8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJD8_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 4.320e-28
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  231 VVNFKDEGDHLANMKLNQTKTNPEINIPAVMIRYRDWARIAPCWNET-NVIFTSEGEAKGD--YGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADA 332
            +VN+K +G+ L NMKLN + +  ++ IP+VMI Y +W +IA C  +   V FT EGEA  D  YG D L WAMMRGMALWIL QCGVNVVRYKRR     AR DA
Sbjct:    1 IVNYKKDGNRLWNMKLNGSTSELDVKIPSVMITYTEWRKIAGCRTKALTVSFTEEGEANYDIDYGKDVLTWAMMRGMALWILLQCGVNVVRYKRRNRHLNARYDA 105          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A7S0G1Q5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Q5_9RHOD)

HSP 1 Score: 87.4 bits (215), Expect = 2.690e-17
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:  430 SEQEEPIC-AVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSM 497
            S+ +EP+C A+CL++FESGQ  R LAC+H+YH+ CIDPWL  SS SCP+CKR I  LPPP +   YGS+
Sbjct:   33 SDSDEPLCCAICLDDFESGQTARQLACNHVYHKECIDPWLLQSS-SCPICKRVIGELPPPLSNDFYGSV 100          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A1X6PG06_PORUM (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG06_PORUM)

HSP 1 Score: 94.4 bits (233), Expect = 7.380e-17
Identity = 143/556 (25.72%), Postives = 196/556 (35.25%), Query Frame = 0
Query:   15 IITAPEACGGS-RVVKHSTAFFGPSADASAVANCNVPLFPPRAQRDGV--------YVRLMSRLGRKHVHT-LRSAAKSLFV-GMVFGRAPDSVPLSD---APPQIPLLEAAAISVRARTTSDAWKNDPKAPLPTVGPTKSPVPSSHLRQIAHSAPSYQFI-------------ASAPREHIHAQESPSAELSAFALFDACCQLSVPADLQAVKGTIAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKL--NQTKTNPE-------------------------------------INIPAVMIRYRDWARIAPCWNE-TNVIFTSEGEAK--GDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAERVSLVHSESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPP--TQLHYGSMHI 499
            ++ AP  CGGS RV+ H+ A FGP+A    V +  +   P     D           +  +SR  R H+   LR +A SL   G          P++     PP  P L+    S  A               P+V   ++  P+S L   A +  +                 A  PR    A  +PS E S     D C  +     L    G    +ARG C F  KV   Q AGA GV+V+N   EG+HLANM+   N+++  P                                      + IPAVMI   DWA + PC     N  FT EGEA    DYG DALN A++RGMA       G                A   +A                   ++  LL +                       ++++   A                                        + +CAVCL+ F +G  V  L C H+YH  CI PWL +SS  CP+CKR +  LPP    +   YGS+ +
Sbjct:   60 VVDAPARCGGSHRVLPHAGAMFGPAAADGLVLSVPLVALPRPGSGDPAPPPAAPLSRLASLSRPRRLHLPAALRLSAPSLSAPGPAXXXXXXXXPVASREGVPP--PPLDTDCGSATA---------------PSVAVGRAARPASRLSPGAVAGATLALXXXXXXXXXXXXXAAGGPRSGAPAA-APSVEASLPG--DGCGAMDPSPSLA---GAAVAIARGGCPFYAKVLAAQAAGAAGVVVINAPAEGNHLANMERAHNESQALPSASGAXXXXXXXXXXXXXXXXXXXXXXXDAPSAADDAGVRIPAVMISAADWASLVPCLGGGVNASFTGEGEATLDVDYGRDALNGALVRGMA------AGSXXXXXXXXXXXXXXXAPGPSAAKXXXXXXXXXXXXXXEPSDTAALLPQ----------------------RAALVAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVCAVCLDAFVAGVLVTPLPCGHVYHAGCISPWLLTSS-VCPVCKRVVGGLPPCAWGSAAEYGSVGV 563          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A7S0BHE5_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHE5_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 2.630e-14
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 0
Query:  136 VGPTKSPVPSSHLRQIAHSAPSYQFIASAPREHIHAQESPSAELSAFALFDACCQLSVPADLQAVKGTIAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMK 245
            VG T  P     L++  HS      IA++ R+  ++  SP  EL    L D C  L+ P DL+AVK  IAV+ARG CDF+ KV +MQ++GALG ++VN+K +GD L NMK
Sbjct:   28 VGRTPWPSTRRALKKSTHS------IAASTRDE-NSSASPVIEL----LHDGCKPLTEPNDLKAVKSKIAVIARGSCDFSTKVLNMQESGALGAVIVNYKKDGDRLWNMK 126          
BLAST of Gcaud2449.t1 vs. uniprot
Match: K3WUB1_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUB1_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 3.370e-12
Identity = 77/290 (26.55%), Postives = 120/290 (41.38%), Query Frame = 0
Query:  204 IAVVARGVCDFAQKVRHMQDAGALGVIVVN--FKDEGDHLANMKLNQTKTNPEINIPAVMIRYRDWARI------APCWNETNVIFTSEGEAKGDYGHDALNWAMMRGMALW-ILCQCGVNVVRYKRRVSEY---RARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAERVSLVHSESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKRE 481
            +A+V RG C+F QKV + Q A A  VIV++   + E      M+ +Q  +N  I+IP+V + Y   A+I      AP W+   V     GE       ++L   ++  + L  ++C     +      + ++   R R  A   LP+  Y R          D    LL +  E           + V        + D     ++     S  G                    +AE      +CA+CLE+F+ G  V++L C H YH  CIDPWL+  S+ CPLCK++
Sbjct:   84 VALVVRGECNFVQKVWNAQRANATAVIVMDNELRVEAPFHIIMQKDQHASN--IHIPSVFVSYTAGAKILHALRHAPPWSPVRVTLNQHGELPNSKTTNSLLKRIVAYIFLVSVVCVFSSGLSLISSTMFQFIGKRRRTRASRKLPLARYQR----------DLQRMLLQQLVE----------EQHVIDHITLDDLGDDEEYDIAFGTIGSHEG------------------CGDAE------VCAICLEDFQVGHNVKVLPCQHFYHVECIDPWLERQSSCCPLCKQD 327          
BLAST of Gcaud2449.t1 vs. uniprot
Match: A0A5M6BQA2_9TREE (RING-type domain-containing protein n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6BQA2_9TREE)

HSP 1 Score: 79.3 bits (194), Expect = 5.140e-12
Identity = 83/316 (26.27%), Postives = 142/316 (44.94%), Query Frame = 0
Query:  203 TIAVVARGVCDFAQKVRHMQDAGALGVIVVNFK-------DEGDHLANM-KLNQTKTNPEINIPAVMIRYRDWARIAPCW-NETNV---------IFTSEGEAKGDYGHDALNWAMMRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPSATQDESTPLLTETSEPETPPIPPIANKPVTS----PAPSSSVMDHRAERVSLVHSESQAGPSS----PPPLVSAPSSSSTAPLEEAESEQEEPI-----CAVCLEEFESGQQVRLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPP 487
            TIA+V RG CDFA KVR  QD GA GVIV + +       +EG    ++  +   +   EI IP+V +    +  +     N T+          +  S+G  +       L++A++   +L++L    V+  R  R+    RA    + +LP   +  +   +   +  + + LL+   EP +P      N  V      P  SSS+ D+      +   E +  P+     P PL + PS +++ P ++ ++  +        CA+C++ F  G  VR+L C H++H+   D WL      CP C+ ++  LPP
Sbjct:  185 TIALVERGGCDFATKVRAAQDRGAAGVIVGDSQLRLGETDEEGRRRESLITMFSPEDTEEIFIPSVFVSRASYLFLKDLIANGTDSGRPEGRGIWVDISQGSDESSALTSLLSFALLMP-SLFLLATIAVHRFRVARQREADRAPPLVVLSLPERIWTPDIVWEKDDSSSDRSILLSPVVEPTSP------NAGVHDHDDPPRTSSSIADNLPPXXPISPDEVRTPPALSIDVPDPLAAPPSDAASGPSKKRKTRVKRQYFSKDECAICMDSFAKGDVVRILPCGHVFHKDECDEWLLKWRKLCPTCRADV-TLPP 492          
The following BLAST results are available for this feature:
BLAST of Gcaud2449.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVQ1_9FLOR1.900e-18657.82RING-type domain-containing protein n=1 Tax=Gracil... [more]
R7Q8Z4_CHOCR4.530e-10159.57RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A5J4YWS7_PORPP4.130e-7936.81E3 ubiquitin-protein ligase n=1 Tax=Porphyridium p... [more]
A0A7S1TLM0_9RHOD1.260e-4243.64Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0BJD8_9RHOD4.320e-2857.14Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0G1Q5_9RHOD2.690e-1759.42Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PG06_PORUM7.380e-1725.72RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A7S0BHE5_9RHOD2.630e-1445.45Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
K3WUB1_GLOUD3.370e-1226.55RING-type domain-containing protein n=1 Tax=Globis... [more]
A0A5M6BQA2_9TREE5.140e-1226.27RING-type domain-containing protein n=1 Tax=Kwonie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 437..478
e-value: 1.6E-8
score: 44.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 436..479
e-value: 6.3E-13
score: 48.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 437..479
score: 13.226928
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 407..485
e-value: 4.4E-20
score: 73.1
NoneNo IPR availableGENE3D3.50.30.30coord: 157..284
e-value: 5.0E-20
score: 74.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..430
NoneNo IPR availablePANTHERPTHR22765:SF334RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 1coord: 419..481
coord: 185..241
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 419..481
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 185..241
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..500
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 437..479
e-value: 9.84109E-20
score: 80.4237
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 429..485
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 194..237
IPR003137PA domainPFAMPF02225PAcoord: 187..268
e-value: 1.3E-12
score: 47.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_42_length_67898_cov_4.520993contigNODE_42_length_67898_cov_4.520993:58396..59898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2449.t1Gcaud2449.t1Gracilaria caudata M_176_S67 malemRNANODE_42_length_67898_cov_4.520993 58396..59898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2449.t1 ID=Gcaud2449.t1|Name=Gcaud2449.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=501bp
MLLLLLILPVATAVIITAPEACGGSRVVKHSTAFFGPSADASAVANCNVP
LFPPRAQRDGVYVRLMSRLGRKHVHTLRSAAKSLFVGMVFGRAPDSVPLS
DAPPQIPLLEAAAISVRARTTSDAWKNDPKAPLPTVGPTKSPVPSSHLRQ
IAHSAPSYQFIASAPREHIHAQESPSAELSAFALFDACCQLSVPADLQAV
KGTIAVVARGVCDFAQKVRHMQDAGALGVIVVNFKDEGDHLANMKLNQTK
TNPEINIPAVMIRYRDWARIAPCWNETNVIFTSEGEAKGDYGHDALNWAM
MRGMALWILCQCGVNVVRYKRRVSEYRARADAIAALPVETYHRNDHSQPS
ATQDESTPLLTETSEPETPPIPPIANKPVTSPAPSSSVMDHRAERVSLVH
SESQAGPSSPPPLVSAPSSSSTAPLEEAESEQEEPICAVCLEEFESGQQV
RLLACSHLYHRSCIDPWLQSSSNSCPLCKREIPNLPPPPTQLHYGSMHIS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain