Gcaud2488.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2488.t1
Unique NameGcaud2488.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length462
Homology
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BLAST of Gcaud2488.t1 vs. uniprot
Match: A0A2V3ISX1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX1_9FLOR)

HSP 1 Score: 451 bits (1159), Expect = 9.620e-153
Identity = 238/461 (51.63%), Postives = 316/461 (68.55%), Query Frame = 0 
Query:    2 SSSDDSDSSPDSGFLYLASMQSFRLKRDYVRAE--KIAGSRRKRVKITRMSKIDASDVSEWSDANNLERYRLTRTAMEWTECFLSNDIVLQGSYDCANLLRSTSCISSSPVVVEADAFFPYCSETELVLNGYVVDEVVRDKVWIVHLSHRRSRQVTLEAGSVYLIGNPHKNRRSAFCHLCRNAHSLNKTPCPKVLRFMPVPSHAHFKARIDDQYQKGARVLTVIPGEPSQLACSLADDDLCATCLRKALKDRGIWFKMNGSCTDRHCPNVDWCECDEELEQDSGACAHYIYISEGKYNNLPDDDLADAVANGLVRTVTGCVESDRRLGTSRSLRKFAKKWLRKQVKVSIEHLLKEFSVQLYPLLKCEVMAMAMIDTRIADMIEGYKSFTLNTGIVTGFVENSEMMAVGPWLEGRLARDSEGTWWQTCRGEPILVSTESDVSTVCKASIDSIGPSDELGRWI 460
            S + DS    D   LYL +++ FR+KR +VRA   K  G   ++VKI RMS ID S    W  ++NL+R+R+ +TA +WT  F+S DI+LQG Y+CANLLR++S  SS+P++ EAD +FPYCS +E V++G+VV EV    +  VHLS RRS ++TL+A  VYLIG   +  +S  C+LC   H LN +PCP +  F+P+PSHAH K RI D+ + GARVLT I G+ S LACS   +DLC +CL +A++    WFKM+G+C D +CPN + C+C EE    S +C+HYIYI + K NN+ DDDLA AVA G VR +TG +ES+ R   S ++RK A K L+   ++S++ L++ FS     L KCEVMAMAM DTR+AD+I+G+KSFTLN   V GFV N+E   VGPWL GRL RD+EG WWQT R EP+LVST   +STV KAS+ S+  SDELGR I
Sbjct:    5 SQNSDSSLESDEHLLYLGTLEEFRIKRKHVRATRAKQPGGGVEQVKIRRMSDIDVSSEENWLRSSNLQRFRMRKTAKDWTAFFMSQDILLQGPYECANLLRNSS--SSNPLLFEADRYFPYCSTSERVVHGHVVAEVPMINLTKVHLSSRRSHRITLKAQCVYLIGKVEEEAQSKPCYLCWTKHDLNDSPCPSISIFVPLPSHAHLKTRIYDRVRCGARVLTKIAGQNSTLACSSGREDLCTSCLARAVRSGCTWFKMDGTCNDWYCPNDERCDCVEE----SDSCSHYIYIPDAKRNNIVDDDLAVAVAEGKVRVLTGALESEWRRKMSYTVRKLAMKALKSGAEISVDSLVRTFSAIDSKLSKCEVMAMAMYDTRLADLIDGHKSFTLND--VNGFVRNAEATEVGPWLAGRLVRDAEGIWWQTARSEPLLVSTRDAISTVSKASVSSLQTSDELGRLI 457
The following BLAST results are available for this feature:
BLAST of Gcaud2488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISX1_9FLOR9.620e-15351.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1112_length_13701_cov_5.226598contigNODE_1112_length_13701_cov_5.226598:3853..5238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2488.t1Gcaud2488.t1Gracilaria caudata M_176_S67 malemRNANODE_1112_length_13701_cov_5.226598 3853..5238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2488.t1 ID=Gcaud2488.t1|Name=Gcaud2488.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=462bp
MSSSDDSDSSPDSGFLYLASMQSFRLKRDYVRAEKIAGSRRKRVKITRMS
KIDASDVSEWSDANNLERYRLTRTAMEWTECFLSNDIVLQGSYDCANLLR
STSCISSSPVVVEADAFFPYCSETELVLNGYVVDEVVRDKVWIVHLSHRR
SRQVTLEAGSVYLIGNPHKNRRSAFCHLCRNAHSLNKTPCPKVLRFMPVP
SHAHFKARIDDQYQKGARVLTVIPGEPSQLACSLADDDLCATCLRKALKD
RGIWFKMNGSCTDRHCPNVDWCECDEELEQDSGACAHYIYISEGKYNNLP
DDDLADAVANGLVRTVTGCVESDRRLGTSRSLRKFAKKWLRKQVKVSIEH
LLKEFSVQLYPLLKCEVMAMAMIDTRIADMIEGYKSFTLNTGIVTGFVEN
SEMMAVGPWLEGRLARDSEGTWWQTCRGEPILVSTESDVSTVCKASIDSI
GPSDELGRWIA*
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