Gcaud1323.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1323.t1
Unique NameGcaud1323.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length893
Homology
BLAST of Gcaud1323.t1 vs. uniprot
Match: A0A2V3IKL6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL6_9FLOR)

HSP 1 Score: 288 bits (736), Expect = 3.780e-80
Identity = 329/968 (33.99%), Postives = 456/968 (47.11%), Query Frame = 0
Query:    1 MSSNSDMESVSISDVEMEEEEEVFVPTAISQPPPQAPVPVAGISLPQSASQPTPKRITMRERALAMRDARLKRNQAKSMKKSGEASGNNPTQNVTDRAQAGDSENG-AIVPTGRQEATP--------------KMSRRANSST----ALESSIEPNSHES-QSLGSKRPGLESKKSEAQAIGKGKRTQLRRE--SGTKKSAKNNTALVKPNEPNKDPGDTNLLGPHEGMPNGQSTLAKDGSKASKTSSGTRKDQRKRKVAAVAVEGKEGGDDSGHESDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTEVTV---------DLEQGGVEAP---SKKKKTSKKSTRANVRILDDDEPLVVRDKRSSKPVVDLLSKDVQTSGT--GEQNPKPLPPKRRPGRPRKYPKVDAPGPQPPTKAT---GEEDNLPQAQGNQEAPVSGTKAQRQTRSRGRKVKQAAPDETESAKKSSHEDDRDFQVSKEKATTRLG---TRSASKEKSPMLPAPKK--IHKPGDDHVAADKINVENVGS-KQIEAAAPEVQVNEGXXXXXXXXXVHTVTQSPTRTKEPSLNDTARRSATKPKRIPFALSASPQGLNIMQPRELNMNASRRKSLSHQEGLNRLTSVVDQLQREGEAFIQTEHRICDQLVSFPPESASHVVYNIPCGNFGVPVPEDDRRAIADATLRDAVMHAKLEYQAKQRAAVSQLAENLVKAMKDWKVAKNAVLRDIIPEELRPEAGAPVETFEQNGHHVDINNSRRIMNEK-----------------INVPQEKPQDE-----NEEQIEGSGVNE-----------EPTKELRTGNTPRISRQEAVAQIRVLKNAEAMKKFAGYAYIGLNLDCYRSCTILKLCEFDEGLSYDDLYRITPIGKVTLRKKIHSLVSSKNLVEETVELPSGKLMTVFKTAPHIAK 890
            M+S+SDMESVSIS++E E E+E+  P   SQP P  P       LP   SQP  KR+TMR+RA A+R+AR++R   KS K S   +            +  D +NG A V T  ++  P              K+S++A+S T     LES+   N  E  +S G+ R      KS             R++  SG   SA+ N          +   + N L  H      Q    K G+++ K S+  R  ++KRK  AV+      GD +  +++                                     XXXXXXXXXXXXX      A  TE  +         D    G +A    S KKK SKKS R     +D+DE +VV +  +++P     SK  + +      Q   P PP+R  GRPRK+PK +   P+   KA         LP+ QG   AP S   + R   ++GRK KQ A  + E   K    DD D  V    AT  +    T S  K++SP   A KK    +P +  ++ + + + +V   K+  A   E  +NEG                          D+A +S  K KR+      SP+GL      E+   A RR+SLSH+E L+RLT+VVDQLQ  GEAF+ T+HR+CDQL   P  S + +V  +  G         DR+AIADA+LRDA+ HAKL YQ  QRAA+S+LAENLVKAM+DWK  KNA LRD+IP +LRP+   P    ++ G     +N       K                   V + K Q+      N+E+IE   +NE           E  K +  G T   SR+  V +I V+K  + +KKF G +Y  L L CYRS +ILKLCE   GL++D+LY  TPIG+  L+KKI +L+    L+ ET+E   G+ + +F TAPHI++
Sbjct:    1 MASDSDMESVSISELESEGEDEI-TPRVTSQPAPSPPRQPTVPQLP--LSQPPTKRMTMRDRAAALREARMRREHGKSGKNSNHGA-----------LEIHDEKNGEAHVNTTNEDVMPLKSLQVSRKDPPRKKVSKKASSQTDDDVLLESAGSKNDTEHLRSSGTGRSATAGSKSGXXXXXXXXXXXXRKDDTSGKASSAQTNHPSTTQQLHEELQSEPNTLRGHASSH--QHPPLKGGARSQKASTAKRVAEKKRKAVAVSQ-----GDGNTSDANTDIVVLETARSAPPTSRQPKKAKLDKSKSTGLSKTTGXXXXXXXXXXXXXASAKVSADDTEGLISPQHVKGQADPNDDGPKAAVLTSGKKKVSKKSARELASAVDEDELIVVDEIHTNEPGSKYPSKAHKGAEKVLAVQPVSPTPPRRGRGRPRKHPKPETVDPESSGKAAVVGRPAAKLPKDQG---APASPRHSPRAQATKGRKGKQLASVDLE---KEQGTDDDDV-VLLHPATPSVSLHRTGSKLKKRSPPARAAKKGSASQPEEVTLSGEDVEMTDVPKPKEAVAGDKEGHLNEGN------------------------RDSALQSVAKKKRVSIMPGPSPRGLRPKTRTEMT-GAGRRQSLSHEEALSRLTAVVDQLQHNGEAFLHTQHRVCDQLAPSPLASQTSIVSYLTNGT--------DRKAIADASLRDAITHAKLVYQRNQRAAISELAENLVKAMQDWKNEKNAFLRDMIPMDLRPK---PAHGLDEGGASFHTDNDEASEQVKHGETSKRASGGDDAGTGATVARWKAQEGMDTLGNDEEIEDD-INEPLRQMAVREVSEGVKLMPAGFTE--SRKAGVNRIPVMKKVDELKKFVGRSYDKLRLGCYRSSSILKLCENVGGLTFDELYDKTPIGRAMLKKKIINLMDKGYLLGETLEGDDGEQIELFYTAPHISE 901          
The following BLAST results are available for this feature:
BLAST of Gcaud1323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKL6_9FLOR3.780e-8033.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 746..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 746..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..556
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_371_length_28318_cov_4.596486contigNODE_371_length_28318_cov_4.596486:23734..26412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1323.t1Gcaud1323.t1Gracilaria caudata M_176_S67 malemRNANODE_371_length_28318_cov_4.596486 23734..26412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1323.t1 ID=Gcaud1323.t1|Name=Gcaud1323.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=893bp
MSSNSDMESVSISDVEMEEEEEVFVPTAISQPPPQAPVPVAGISLPQSAS
QPTPKRITMRERALAMRDARLKRNQAKSMKKSGEASGNNPTQNVTDRAQA
GDSENGAIVPTGRQEATPKMSRRANSSTALESSIEPNSHESQSLGSKRPG
LESKKSEAQAIGKGKRTQLRRESGTKKSAKNNTALVKPNEPNKDPGDTNL
LGPHEGMPNGQSTLAKDGSKASKTSSGTRKDQRKRKVAAVAVEGKEGGDD
SGHESDVILLQSKVSTAAPPRAKKRARVESAKSAASPKATTRSLKKKKGA
AVPQSPSGATTTAAGTEVTVDLEQGGVEAPSKKKKTSKKSTRANVRILDD
DEPLVVRDKRSSKPVVDLLSKDVQTSGTGEQNPKPLPPKRRPGRPRKYPK
VDAPGPQPPTKATGEEDNLPQAQGNQEAPVSGTKAQRQTRSRGRKVKQAA
PDETESAKKSSHEDDRDFQVSKEKATTRLGTRSASKEKSPMLPAPKKIHK
PGDDHVAADKINVENVGSKQIEAAAPEVQVNEGPEVQVNEGSVHTVTQSP
TRTKEPSLNDTARRSATKPKRIPFALSASPQGLNIMQPRELNMNASRRKS
LSHQEGLNRLTSVVDQLQREGEAFIQTEHRICDQLVSFPPESASHVVYNI
PCGNFGVPVPEDDRRAIADATLRDAVMHAKLEYQAKQRAAVSQLAENLVK
AMKDWKVAKNAVLRDIIPEELRPEAGAPVETFEQNGHHVDINNSRRIMNE
KINVPQEKPQDENEEQIEGSGVNEEPTKELRTGNTPRISRQEAVAQIRVL
KNAEAMKKFAGYAYIGLNLDCYRSCTILKLCEFDEGLSYDDLYRITPIGK
VTLRKKIHSLVSSKNLVEETVELPSGKLMTVFKTAPHIAKMG*
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