Gcaud1317.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A2V3ITC7_9FLOR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITC7_9FLOR) HSP 1 Score: 301 bits (772), Expect = 1.570e-101 Identity = 144/217 (66.36%), Postives = 182/217 (83.87%), Query Frame = 0
Query: 1 MATRYLCMYNGAMAVGWSIVLMRLLQALVKRSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKKYVVAPAAKAAKTE 217
++TRYL +YN M VGWS VL+RLLQA+ SSVY+AV PL +FQTGA+LE+IHS+ GL+RAPV+TT LQV+SRLM++WG+ PV +RSN+SF M++AWSLTEIPRYLYFTV+S A HVP WLT++RY+TF+PLYPLGASSEWLT+YAAL +IR KL+++SLPN NFAF+Y+ + +++L +YIPGLPHMYSHMLRQRKKYV P AK AK +
Sbjct: 2 LSTRYLFLYNAVMCVGWSAVLVRLLQAISTGSSVYEAVQAPLKIFQTGALLEVIHSVIGLIRAPVATTLLQVSSRLMILWGVTQPVEPVRSNLSFIAMIIAWSLTEIPRYLYFTVASVARHVPSWLTFIRYTTFIPLYPLGASSEWLTLYAALPHIRQSKLFSISLPNYLNFAFNYHYFCVIILTMYIPGLPHMYSHMLRQRKKYVTVPTAKPAKAD 218
BLAST of Gcaud1317.t1 vs. uniprot
Match: R7QF60_CHOCR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF60_CHOCR) HSP 1 Score: 248 bits (632), Expect = 1.970e-80 Identity = 128/205 (62.44%), Postives = 163/205 (79.51%), Query Frame = 0
Query: 13 MAVGWSIVLMRLLQALVKRSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKKYVVAPAAKAAKTE 217
M GWSIVL+RLL+AL+ VY AV LPL + QTGAILE++H+L+GLVRA +TT LQV+SRLMLVWG++D VP++R + T+MVLAWSLTEIPRYLYF+V++ + +P LT+LRYSTF+PLYPLGA SE T+YAAL YI + +V +PNR NFAFDYY +L+LV Y+PGLP+M++HMLRQRKKYVV+PA K K +
Sbjct: 1 MTAGWSIVLLRLLRALISSEPVYPAVRLPLALSQTGAILEVVHALSGLVRASAATTLLQVSSRLMLVWGVLDLVPEVRLAPTVTSMVLAWSLTEIPRYLYFSVAAATTQIPPGLTWLRYSTFIPLYPLGAGSEAATLYAALPYIEAARPLSVYMPNRVNFAFDYYYMCVLVLVNYLPGLPYMFAHMLRQRKKYVVSPAEKLVKAQ 205
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A1X6PAC8_PORUM (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAC8_PORUM) HSP 1 Score: 192 bits (488), Expect = 3.120e-58 Identity = 106/226 (46.90%), Postives = 150/226 (66.37%), Query Frame = 0
Query: 1 MATRYLCMYNGAMAVGWSIVLMRLLQALVK----------RSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFK--LYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKKYV-VAPAAKA 213
MA YL +YN AM +GW+ VL RLL + + V+DAV PL +FQTGA EI+H+ TGLVR PV TT LQV+SRL L+W I+ +P +R + ++V AW+ TE+PRY ++ V + + VP WL +LRYSTFLPLYPLGA SE + AAL + + ++++PNR+N AFD++V+ ++V+Y+PGLP MY+HM+RQR+K + AP +A
Sbjct: 5 MARGYLFVYNMAMCLGWAYVLGRLLVTVANPPPPPDPGYPHTPVWDAVEAPLKLFQTGAAAEILHAATGLVRTPVGTTALQVSSRLFLLWPILAGLPPVRGRAAVGSLVAAWAATEVPRYAFYAVGAAGAAVPRWLVWLRYSTFLPLYPLGAGSEVALIVAALPVVARARGAYLSLAMPNRWNVAFDFWVWCAFIIVMYVPGLPFMYTHMMRQRRKALGAAPKTRA 230
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A7S3EME0_9RHOD (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EME0_9RHOD) HSP 1 Score: 186 bits (471), Expect = 8.800e-56 Identity = 103/207 (49.76%), Postives = 137/207 (66.18%), Query Frame = 0
Query: 1 MATRYLCMYNGAMAVGWSIVLMRLLQALVKRSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQ-IRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKKYV 206
+A YL +YN A A+GWS+VL L+ V + AV L + QT A+LEI+H L GLVRA V +T LQV+SR+ ++W + DP + ++F TMVLAWSLTEIPRY YF + P W+T+LRYS+F+PLYPLGA+SE +Y L I++ + Y++ +PN NFA D Y I L++YIPGLP MYSHM+ QR KYV
Sbjct: 3 LAKAYLFLYNTAAAIGWSLVLGNLIWG-VYADDAWSAVEWSLKISQTAAVLEILHCLLGLVRASVFSTILQVSSRIYILWVVADPFHDAVGQFLAFKTMVLAWSLTEIPRYAYFAIGQ-VQKPPKWMTWLRYSSFMPLYPLGAASEAACLYTVLPLIKEARPYSIYMPNTLNFALDSYFTSICSLLIYIPGLPFMYSHMIGQRAKYV 207
BLAST of Gcaud1317.t1 vs. uniprot
Match: UPI001CF97F1F (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF97F1F) HSP 1 Score: 184 bits (466), Expect = 4.860e-55 Identity = 96/202 (47.52%), Postives = 138/202 (68.32%), Query Frame = 0
Query: 5 YLCMYNGAMAVGWSIVLMRLLQALVK--RSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
YL +YN + VGW VL ++ L +VY AV PL QT A+LEI+H L GLVR+P++ T Q++SRL + WGI+ PQ +++I +++V++WS+TEI RY +F + H P WL +LRYSTFL LYP G +SE +Y AL YI+ +LY++ +PN++NF+FDY+ +L+L LY+PG PHMY++ML QRKK
Sbjct: 12 YLVVYNWTVFVGWCQVLYLAVKTLKDSGHENVYSAVEKPLQFAQTAAVLEILHGLVGLVRSPITATLPQISSRLYVTWGILWSFPQTQTHIIVSSLVISWSITEIIRYSFFGLKEAVGHTPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYIKGSELYSIRMPNKWNFSFDYFYTALLVLGLYVPGSPHMYTYMLSQRKK 213
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A2I0IE91_PUNGR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IE91_PUNGR) HSP 1 Score: 181 bits (460), Expect = 3.920e-54 Identity = 96/202 (47.52%), Postives = 137/202 (67.82%), Query Frame = 0
Query: 5 YLCMYNGAMAVGWSIVLMRLLQALVK--RSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
YL +YN A+ VGW VL+ ++ L + VY AV PL + QT A+LEIIH L GLVR+P++ T Q++SRL L WGI+ P+ +++I +++V++WS+TEI RY +F + P WL +LRYSTFL LYP G +SE +Y AL YI++ + Y + +PN++NF+FDYY IL L +Y+PG PHMY +ML QRK+
Sbjct: 12 YLSVYNWAVFVGWLQVLVLAVKTLKESGHEQVYSAVERPLQLSQTAAVLEIIHGLVGLVRSPITATLPQISSRLYLTWGILYSFPETQNHILVSSLVISWSITEIIRYSFFGMKEALGFAPSWLLWLRYSTFLVLYPTGITSEVGLIYIALPYIKNSEKYCIRMPNKWNFSFDYYYAAILALGIYVPGSPHMYGYMLAQRKR 213
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A2T7DR43_9POAL (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7DR43_9POAL) HSP 1 Score: 181 bits (459), Expect = 5.550e-54 Identity = 104/204 (50.98%), Postives = 134/204 (65.69%), Query Frame = 0
Query: 5 YLCMYNGAMAVGWSIVLMRLLQALVKRSS----VYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
YL +YN + VGW+ VL LV R S VY AV PL QT AI+EI+H L GLVR+PVS T Q+ SRL L WGI+ P+ RS+I TT+V++WS+TEI RY +F + P WL +LRYSTF+ LYP G SSE ++ AL YI+ + Y LPNR+NF++DYY IL L++YIPG PHM+++ML QRKK
Sbjct: 12 YLSVYNWVVFVGWAQVLYY--AVLVLRESGHEAVYAAVERPLQFAQTAAIMEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETRSHILVTTLVISWSITEIIRYSFFGMKEALGFTPSWLLWLRYSTFMVLYPTGISSEVGLIWIALPYIKASEKYCFRLPNRWNFSYDYYFTSILALMIYIPGSPHMFTYMLSQRKK 213
BLAST of Gcaud1317.t1 vs. uniprot
Match: A0A7C8YJA4_OPUST (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YJA4_OPUST) HSP 1 Score: 181 bits (459), Expect = 5.550e-54 Identity = 95/202 (47.03%), Postives = 138/202 (68.32%), Query Frame = 0
Query: 5 YLCMYNGAMAVGWSIVLMRLLQALVK--RSSVYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
YL +YN A+ GW+ VL ++ L++ VY+AV PL + QT A+LEIIH L GLVR+P+S T Q+ SRL + WGI+ P+ R++ +++V++W++TEI RY +F + P WL +LRYSTFL LYP G SSE +Y AL YI++ + Y + +PN++NF+FDYY +L+L +Y+PG PHMY++ML QRKK
Sbjct: 12 YLSIYNWAVFFGWAQVLYFAVKTLIESGHEHVYNAVEKPLLLAQTAAVLEIIHGLIGLVRSPISATLPQIGSRLYVTWGILYSFPETRTHFLVSSLVISWAITEIIRYSFFGLKEAFGSAPSWLQWLRYSTFLLLYPSGISSEVGLIYTALPYIKNSEKYCIRMPNKWNFSFDYYYAALLVLAIYVPGSPHMYTYMLGQRKK 213
BLAST of Gcaud1317.t1 vs. uniprot
Match: H0XBF8_OTOGA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=40 Tax=Eutheria TaxID=9347 RepID=H0XBF8_OTOGA) HSP 1 Score: 182 bits (461), Expect = 7.450e-54 Identity = 91/207 (43.96%), Postives = 141/207 (68.12%), Query Frame = 0
Query: 1 MATRYLCMYNGAMAVGWSIVLMRLLQALVKRSS---VYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
+AT YL +YN M GW ++ + L++A + + S +Y ++ PL FQTGA+LEI+H G+V + V T+ QV SR+ L+W + V +++S S V+AW++TEI RY ++T S +H+PY + + RY+ F+ LYP+G S E LTMYAAL ++R LY++SLPN++NF+FDYY ++IL+++ YIP P +Y HM+ QR+K
Sbjct: 37 LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNHLPYLIKWARYTLFIVLYPMGVSGELLTMYAALPFVRQAGLYSISLPNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRK 242
BLAST of Gcaud1317.t1 vs. uniprot
Match: UPI000B8CD6E1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CD6E1) HSP 1 Score: 181 bits (458), Expect = 7.860e-54 Identity = 100/203 (49.26%), Postives = 136/203 (67.00%), Query Frame = 0
Query: 5 YLCMYNGAMAVGWSIVLMRLLQALVKRSS---VYDAVCLPLNVFQTGAILEIIHSLTGLVRAPVSTTTLQVASRLMLVWGIVDPVPQIRSNISFTTMVLAWSLTEIPRYLYFTVSSFASHVPYWLTYLRYSTFLPLYPLGASSEWLTMYAALSYIRDFKLYTVSLPNRFNFAFDYYVYVILLLVLYIPGLPHMYSHMLRQRKK 204
YL +YN + VGW+ VL L+ L K S VYDAV PL QT A+LEI+H L GLVR+PV T Q++SRL L WGI+ P++RS++ +++V++WS+TEI RY +F + P WL +LRYSTFL LYP G SSE +Y AL YI+ Y + +PN++NF+FDY+ IL L +Y+PG PHMY++ML QRK+
Sbjct: 12 YLTIYNWTVFVGWAQVLFLALKTL-KESGYEHVYDAVEKPLQFAQTAAVLEILHGLVGLVRSPVMATLPQISSRLYLTWGILWSFPEVRSHMIVSSLVISWSVTEIIRYSFFGMKEGLGSAPSWLLWLRYSTFLLLYPTGISSEVGLIYLALPYIKRSDKYCIRMPNKWNFSFDYFYAAILALGIYVPGSPHMYTYMLGQRKR 213 The following BLAST results are available for this feature:
BLAST of Gcaud1317.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1317.t1 ID=Gcaud1317.t1|Name=Gcaud1317.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=218bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|