Gcaud9504.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9504.t1
Unique NameGcaud9504.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length138
Homology
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BLAST of Gcaud9504.t1 vs. uniprot
Match: A0A2V3IXJ3_9FLOR (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ3_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 3.250e-78
Identity = 112/137 (81.75%), Postives = 126/137 (91.97%), Query Frame = 0 
Query:    1 MSEVEGKISIWIKSGSFNHASDLYIKVFIDDNDIWRTDDKDGFTPDWDSTCVKHIKGDYEKVIIKLLDEDTCTRDDVIATAEFSIHDLLDDGINDDEVPMSDADGNQVGTLAVNINFEAGDVNAFELFGAMLHKGDD 137
            M+EVEGKISIWIKSGSFNH SDLYI+V IDDN IW+T++KDGFTPD+DST VKHIKGDYEK++++L+DEDTCTRDDVIATAEF I DLLDDGINDD V M DADGN+VGTL VNINFEAGDVNAF+LFG+MLHKG D
Sbjct:    1 MAEVEGKISIWIKSGSFNHGSDLYIQVLIDDNSIWKTEEKDGFTPDFDSTVVKHIKGDYEKIVLRLMDEDTCTRDDVIATAEFPIADLLDDGINDDSVSMCDADGNEVGTLGVNINFEAGDVNAFQLFGSMLHKGGD 137
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BLAST of Gcaud9504.t1 vs. uniprot
Match: R7QFN6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 175 bits (444), Expect = 3.170e-54
Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 0 
Query:    4 VEGKISIWIKSGSFNHASDLYIKVFIDDNDIWRTDDKDGFTPDWDSTCVKHIKGDYEKVIIKLLDEDTCTRDDVIATAEFSIHDLLDDGINDDEVPMSDADGNQVGTLAVNINFEAGDVNAFELFGAMLHKGD 136
            +EGK+SIWIK GSF+H+SDLY+KV IDD ++W+TD+KDG +PDWDST VKHIKG+YEK+I+KL+DEDT +RDDVI T EF I D +  GIN     + DA+ N VGT+ VNINFE GDV+ F+L G+MLHK D
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GING-SFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHKDD 131
The following BLAST results are available for this feature:
BLAST of Gcaud9504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXJ3_9FLOR3.250e-7881.75C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QFN6_CHOCR3.170e-5463.91C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 18..95
e-value: 6.7E-9
score: 36.0
IPR000008C2 domainPROSITEPS50004C2coord: 1..98
score: 9.164692
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 10..119
e-value: 1.2E-10
score: 43.9
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 11..117
NoneNo IPR availableCDDcd00030C2coord: 12..97
e-value: 1.18098E-7
score: 45.1355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_69_length_56878_cov_4.412084contigNODE_69_length_56878_cov_4.412084:17216..18035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9504.t1Gcaud9504.t1Gracilaria caudata M_176_S67 malemRNANODE_69_length_56878_cov_4.412084 17216..18035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9504.t1 ID=Gcaud9504.t1|Name=Gcaud9504.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=138bp
MSEVEGKISIWIKSGSFNHASDLYIKVFIDDNDIWRTDDKDGFTPDWDST
CVKHIKGDYEKVIIKLLDEDTCTRDDVIATAEFSIHDLLDDGINDDEVPM
SDADGNQVGTLAVNINFEAGDVNAFELFGAMLHKGDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf