Gcaud9478.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9478.t1
Unique NameGcaud9478.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length442
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9478.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..441
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_318_length_30347_cov_4.399028contigNODE_318_length_30347_cov_4.399028:667..1992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9478.t1Gcaud9478.t1Gracilaria caudata M_176_S67 malemRNANODE_318_length_30347_cov_4.399028 667..1992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9478.t1 ID=Gcaud9478.t1|Name=Gcaud9478.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=442bp
MRTYVVFRDGATTTISQPITDVEIAVVCLSYIFAMMSVLLRFRGEGNPRD
PLTIPFVNLIFIFISIAISMVALVLAFTNLISLDAMAAATIGLIPSLHLL
RTIQFLELKIRWLVFWRVYGGTEGMFFYYRVRTEKPGFAQDRVSQERLHI
IYYPHQVRIIRIFLLLRNAFYRAFACCCTKPESDKYLSRFFRDERIPKEE
RNERKFWTGYHVEEYKSGIVLTQSRQYGGAWFEIERVLGGHTLATDPSKV
HAGTSSSVISGLCALTEIIIVGDLCRKLFSKTLRYEHAVLLAYDRYQEAM
SFCLQTLRNLDLHKQWGLESKRDNTSMSANTFYNSARERNEFFQCLFFIL
TVKSRKYANVDKRSQKYVAQVLRNGANGESLETLKADVKRWLLCYDYDVD
STSPNTTDSSIEMDSKLKKPYRKHLCKSFSFGCLKRANEMK*
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