Gcaud8621.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8621.t1
Unique NameGcaud8621.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length509
Homology
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A2V3IYQ5_9FLOR (Pre-mRNA-processing factor 19 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYQ5_9FLOR)

HSP 1 Score: 541 bits (1393), Expect = 9.770e-187
Identity = 279/512 (54.49%), Postives = 365/512 (71.29%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGD----TEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSAPKSSVMSSFVEIGRTAVDGTDVELRAVCVNGGKAIVGCSNGKLHVIEQDMKVSHSEEAHSNGVSAMYWDEKIFTGGEDGVVKVWDDEMNCKAIFDGKGAVQDIERHPLKSVMYCSRADGFELRNVEDGVVIGSAKVDNECGAIHPDGLLLATGGKKGLRMWDFSSLKQVAELQAEGVIQVAMSEKGYYMVSIGTEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKKKAKTLARIEAKAACAERLGVAWGAQSSFVVIGGSDGVLRKFGAAAS 508
            MYCALSGNIPKEPVVSVKSGHL+ER LIEK+L+VNGNKCPETGEPL ++DLLPVK+G ++ PLPPEKSSMP VLDHVRAEWDR+ LELHTA+++LH TRQELATALYRC AS R+IAKLE+ERDEL+  R     NG+    ++QA +H N A+ +  Q     +  E+  ++ +K +   + Q+  DQ E G+++LP+G++ QA+KLA ELQE RK+RKS+AP S V+SSF E+G+TAVDG +V + A+CV+      GCS+GK+HV++ DM VSH+E+AH++GV ++  DE +FTGG DGV+KVWD+ M CK I DG   VQD++RHPLKS+++C R +G+E RN+EDGVV+GSAK    CGAIHPDGLL ATG +KG+RMW+ SSLK V EL+++ V Q+ MSEKGYYMV++  EEA                                            KKKAK  AR++       RLG+AWG Q+S +++GG+DG+LRKFGA +S
Sbjct:    1 MYCALSGNIPKEPVVSVKSGHLYERALIEKELSVNGNKCPETGEPLTTADLLPVKSGGYVLPLPPEKSSMPHVLDHVRAEWDRVILELHTAKRRLHVTRQELATALYRCQASERLIAKLERERDELK--RSHLNPNGNAQNASQQAIDHENKADSIELQH----SADEKPEQKKDKEEVNQDNQSQADQSENGIISLPEGLVEQARKLATELQEGRKARKSAAPGSDVISSFAELGQTAVDGAEVHVGALCVHERNIFAGCSSGKVHVVKPDMTVSHTEDAHADGVLSICLDEWLFTGGRDGVIKVWDESMKCKTIIDGADPVQDVQRHPLKSMLFCCRPNGYEWRNIEDGVVLGSAKDSISCGAIHPDGLLFATGAEKGIRMWELSSLKPVVELKSKHVQQIVMSEKGYYMVTVQPEEATVWDLRKQGIVGSVPMDGASGVALDEYGEFGCVVGTSGMNIFGAKKKAKIFARLKVSGTSDGRLGIAWGEQASCIIVGGTDGILRKFGAPSS 506          
BLAST of Gcaud8621.t1 vs. uniprot
Match: R7Q9H2_CHOCR (Pre-mRNA-processing factor 19 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9H2_CHOCR)

HSP 1 Score: 225 bits (574), Expect = 1.020e-63
Identity = 185/526 (35.17%), Postives = 281/526 (53.42%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVK-NGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRA---QRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVT-LPDGIISQAQKLAIELQETRKSRK--SSAPKSSVMSSFVEIGRTAVDGTDVELRAVCVNG-GKAIVGCSNGKLHVIEQDMK--VSHSEEAHSNG-VSAMYWD-EKIFTGGEDGVVKVWDDEM-NCKAIFDGKGAVQDIERHPLKSVMYCSRADGFELRNVEDGVVI--GSAKVDNECGAIHPDGLLLATGGKKGL-RMWDFSSLKQVAELQAEG--VIQVAMSEKGYYMVSIGTEEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKKKAKTLARIEA---KAACAERLGVAWGAQSSFVVIGGSDGVLRKFGA 505
            M+C++SG +P  PVVS KSGH+FER LIE+ L  +  +CPETGEPL +SDL+ +K +G  + PL P + S+P VL H++ EWD   LELH  + +L++TR+ELA ALY+ + + RVIAK+ ++       +E+ATA    E   +  NGA V  A   + KK A +  + +++    D     ++          T  P+ ++ + +  + ELQ+ RK RK  +S  ++  + S  E G+ AVDG++  + ++     G    G S+GKL  ++      V  +   H++G V  + WD E++ + G  G VK+WD +       ++  G V D++ HP K V++   A+G  +     G V+  G        G +HPDG++ ATG   G+  MWD  ++K VAEL   G  V+ + MSEKGYYM S       XXXXXXXXXXXXXX                             KKK KT+ ++     +   A R G AWG  +  +V+GG+DG +R++GA
Sbjct:   10 MFCSISGIVPDVPVVSAKSGHIFERRLIEQALEASDGRCPETGEPLSTSDLIEIKKSGTVVEPLVPAEVSVPGVLRHLQKEWDTTMLELHQVKTELNETRKELANALYKYETAERVIAKMNQDM------KESATARASDEVQTDETNGARVEAAAAGEVKKDATQDSKTSDRVMVKDKVVTGRDATADVSSSTRTEFPEELLKKVKARSAELQKKRKERKVPASHARADTLKSLSETGQVAVDGSEATVTSLARGADGLMYGGTSSGKLMTLDTRGMGVVGKAVVGHTDGGVKRVRWDGERVVSCGA-GSVKIWDGQTWEQLGGWEETGEVVDVDVHPTKEVVFVVLAEGKWVWRELGGRVVCEGQGGEGYGSGVVHPDGMVFATGRTDGVVEMWDLRTMKCVAELGERGGRVVSLEMSEKGYYMASCRXXXXXXXXXXXXXXXXXXXMEGVVGLALDGVGEFGGAVGAGGVAVFMGKKKTKTVVKVPMHKWQVGGAGRQGCAWGDDAGCIVVGGADGTVRQYGA 528          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A061S8V8_9CHLO (Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8V8_9CHLO)

HSP 1 Score: 157 bits (398), Expect = 7.760e-39
Identity = 144/447 (32.21%), Postives = 214/447 (47.87%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAAT--ANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIE----LQETRKSR---KSSAPKSSV----MSSFVEIGRTAVDGTDVELRAVC--VNGGKAIVGCSN-GKLHVIEQDMKVSHSEEA-HS---NGVSAMYWDEKIFTGGEDGVVKVW---DDEMNCKAIF-DGKGAVQDIERHPLKSVMYCSRADG----FELRNVEDGVVIGSAKVDNE--CGAIHPDGLLLATGGK-KGLRMWDFSSLKQVAELQAEG--VIQVAMSEKGYYMVSIGTE 414
            M+CA+SG++P+EPVVS  SGHLFE+ LI K L  +  +CP TGE L   DLL ++  + + P     SS+P +L   + EWD L LE H  ++ LH+ RQEL+ ALY+ DAS RVIA+L KERDE R+A   AT  A  D E      NG        K+PA          E  DA  E +               GI S+A+ L  E    L ++RK R   + +A +  +    ++S   + +T   G  +   A+C  V G K +    N G + V + D      E A HS   N V+ +   + + T   D  V++W   D+   C  +  +    VQ +  HP       + AD     +++   +  + +  + V     C + HPDGL+L TGG    +R+W+  S K VA        +  ++ SE GYY+ +  T+
Sbjct:    1 MFCAISGHVPEEPVVSRSSGHLFEKRLILKHLETDP-RCPVTGEELSKDDLLDLQTNKAVKPRTAPASSIPGLLGLFQNEWDALMLESHNLKQNLHKLRQELSHALYQHDASCRVIARLIKERDEARSALAQATRAAPADME------NG--------KRPA----------ESEDAAQEAKRAK-----------SGITSEAEALMTETSAKLSKSRKKRTIPEGTAGQDDIEALALASSHPLHKTTKGG--INHIAICPFVAGSKLLATAGNDGTVQVFDGDKGQVVGELAGHSKRVNNVAFVGGPDALITASADSTVRMWKGGDESFECVHVCKEHSQDVQGLTLHPTGKFFISASADATWAFYDVDTADCMLKVSDSNVTAPYTCASFHPDGLILGTGGTDNAVRIWEVRSSKNVATFDTHTGPITSLSFSENGYYLATSATD 409          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A6A6UZL8_9PLEO (Pre-mRNA-processing factor 19 n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6UZL8_9PLEO)

HSP 1 Score: 156 bits (395), Expect = 1.350e-38
Identity = 130/423 (30.73%), Postives = 199/423 (47.04%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSAPKSSVMSSFVEIGRTAVDGTDVELR------AVCVNGGKAIVGCSNGKLHVIE-QDMKVSHSEEAHSNGVSAMYWDEKIFTGGEDGVVKVWDDEMNCKAIFDGKGAVQDIERHPLKSVMYCSRADG----FELRNVEDGVVIGSAKVDNECGAIHPDGLLLATGGKKG-LRMWDFSSLKQVAELQAEG-VIQVAMSEKGYYMVS 410
            M CA+SG  P+EPV S KSG++FE+ LIE  +A +    P TGE L   DL+ +K+   +TP PP  +S+P +L   + EWD + LE  T ++QL QTRQEL+TALY+ DA+ RVIA+L +ERDE R A  + T +G        A GA                                  D  E     LPD ++++ ++    L  TR+ R    P     ++   IG   V  T   L       A+  +G  A+ G ++G   +      K+ H+ +A      A++ + +       G VKV++            GAV  +  HP K++   + AD     ++L N +    + + + D+ C A H DGLL  TGG  G +R++D  +   +A L+  G V  ++ SE G +  S
Sbjct:    1 MLCAISGEAPREPVASRKSGNVFEKRLIEAHIAEHHTD-PVTGEDLAVEDLIELKSPRIVTPRPPNLTSIPALLSSFQTEWDAIMLETFTLKQQLAQTRQELSTALYQNDAATRVIARLTQERDEARQALSSVTVSGGA------ATGA---------------------------------GDSMEVDGQALPDDLVAKVEETQQRLFATRRKR----PIPEGWATGEHIGSLDVSATIDSLYPGSTSIAIDSSGDLALFGGADGVAGIYSISQQKLLHTLKAGGAVTDAIWCESRAVVATASGTVKVFESGEEITQWSQHAGAVTSLALHPSKAIFASTGADKRFIFYDLANFKMVSQVYT-EADSTCCAFHVDGLLFFTGGSDGSIRIFDVKTGGSMAVLETSGSVSSISFSENGTWFAS 378          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A8J4PTV0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTV0_9MYCE)

HSP 1 Score: 157 bits (396), Expect = 1.450e-38
Identity = 139/436 (31.88%), Postives = 204/436 (46.79%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRK--SSAPKSSVMSSF-VEIGRTAVDGTDVELRAVCV---NGGKAIVGCSNGKLHVIEQD-MKVSHSEEAHSNGVSAMYWD----EKIFTGGEDGVVKVW--DDEMNCKAIFDGKG---AVQDIERHPLKSVMYCSRAD-GFELRNVEDGVVIGSAKVDN------ECGAIHPDGLLLATGG-KKGLRMWDFSSLKQVAELQA----EGVIQVAMSEKGYYM 408
            M C++SGN P E VVS+K+G+++E+ LIEK +  NG + P TGEPL  +DL+ VK G+ + P P   +S+P +L   + EWD L LE  T ++Q    RQELA +LY+ DA+ RVIA+L KERD  R A      NG T  A     G +V         N  E                          +TLP  +    Q+ + +L  TRK R   S+ PK   +S + V +       T   +  + +   N    + G  +  ++V  +   K+  S + H   V+ + +     + IF+   D  V+VW   D  + K+ F  K     V DI  HPL S +  +  D  + + +V  G ++ S +  N       C   HPDG LLATG   K L +WD +S   VA L        +  +A SE GYY+
Sbjct:    1 MICSISGNTPDEAVVSIKTGNVYEKRLIEKYIETNGKE-PTTGEPLSINDLVTVKVGKVVKPRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQYETIRQELAHSLYQYDAACRVIARLVKERDIARNALSNVRHNGSTSAA----TGMDV---------NSDE--------------------------LTLPKNVQDSIQENSKQLFATRKKRSIPSTLPKVEDLSEYNVTVSVPVHSSTKPGILCLDIHKQNANLIVSGGMDQNVNVFNKSTQKIESSLQGHHKKVNRVKFHPTNTDSIFSCSSDKSVRVWAKGDSEDYKSTFTFKNHQDEVTDISVHPLGSYLLSASLDKSWNMYDVNVGQLLLSVRPTNVMLSGYTCANFHPDGALLATGNTNKELSIWDINSKALVANLNNGAFNSSITSMAFSENGYYL 396          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A7S0G9U0_9RHOD (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G9U0_9RHOD)

HSP 1 Score: 155 bits (392), Expect = 3.000e-38
Identity = 145/443 (32.73%), Postives = 209/443 (47.18%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVK-NGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQA--DEHANGAEVLRAQRKKPANEGEEDNEQTEKNDA-EPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSA----PKSSVMSSFVEIGRTAVDGTDVELRAVCV-----NGGKAIVGCSNGKLHVI-EQDMKVSHSEEAHSNGVSAMYW----DEKIFTGGED--GVVKVWDDEMNCKAIFDGKGA-VQDIERHPLKSVMY-CSRADGFELRNVEDGVVIGSAKVD-----NECGAIHPDGLLLATGGKKGL-RMWDFSSLKQVAELQAEG--VIQVAMSEKGYYMVSIGT 413
            M+CA+SG  P+EPVVS KSGH++E+ LI + L  +G K PETGE L   DL+ VK +G  + P P   +S+P  L  +R EWD + LE    ++ L  TR EL+ +LY  DAS RVIA+L  ERDE R A       G   Q   ++  NG+  L           E D  + EK  A EP+              L + +I    K A  L++ R  R + +    P  S      E  +  V+G  VE+    +     + G   VGCS+G   V+ EQ  ++    +AH  G+ A+      D  I TG +    V +  D   + KA F      +     HP       CS+   + + ++E    + S  VD     N C   HPDG + A+G + G+ R+WD  SL  VA  + E   V  + +SE GY +VS+G+
Sbjct:    1 MFCAISGVTPEEPVVSKKSGHVYEKRLILQHLIASGGKDPETGEDLTEEDLVSVKVSGSSVKPTPTTNTSIPGTLTQLRNEWDSVMLESFKLKQTLKSTRLELSHSLYYYDASLRVIARLTDERDEARKALMELRKKGVYMQDGNEKKMNGSSNL----------NEADAMEVEKAGADEPQL-------------LSEEVIENIGKKAEALKKWRMKRPAISGLLKPSGSSGLGEKESRKYHVEGVSVEVMRTAMKVENPSYGHVFVGCSDGSCKVLNEQCTEIQSQFKAHEGGIGALAVSSASDVVISTGADQKSSVARHSDGGFSQKASFKCHSMDITGCSIHPTDDYFATCSKDGKWAVHDIETVTTLASV-VDPDGSPNLCAEFHPDGAIFASGLENGIVRVWDVRSLTSVASFETESGPVSTLTLSENGYSLVSVGS 419          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A8I9S6_CHLRE (Pre-mRNA-processing factor 19 n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8I9S6_CHLRE)

HSP 1 Score: 155 bits (393), Expect = 4.030e-38
Identity = 135/440 (30.68%), Postives = 206/440 (46.82%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSAPKSSVMSSFVEIGRTAVDG-------TDVELRAVCVNG---GKAIVGCSNGKLHVIEQ-DMKVSHSEEAHSNGVSAMYW--DEKIFTGGEDGVVKVW------DDEMNCKAIF-DGKGAVQDIERHPLKSVMYCSRADG----FELRNVEDGVVIGSAKVDNE---CGAIHPDGLLLATGGK-KGLRMWDFSSLKQVA--ELQAEGVIQVAMSEKGYYMVS 410
            M+C++SG +P++ VVS KSGHLFE++LIEK +   G KCP TGEPL + DLLP+K  + + P     +S+P +L     EWD   LELH  + QLHQTRQEL+ ALY+ DA+ RVIA+L KERDE RAA        D +Q  ++A           +   EG                        R    +P+ +I+   ++   L + RK R    P    ++S  +I    + G       T   + A+ VN    G  +    +  L + +    +V  S E H+   + + W   + I +   D   +VW        E +C ++  D    V  +  HP +        D     +++ ++     +G+ +   E   C   HPDGL+L TG + K +R+W+  + K VA  E  A  +  +A SE GY+M S
Sbjct:    1 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETG-KCPVTGEPLSTEDLLPLKVNKTVKPRTAPATSIPGLLSLFHDEWDANMLELHNTRTQLHQTRQELSHALYQHDAATRVIARLLKERDEARAAL------ADMKQ--QYAADVAAXXXXXXEGGGEG----------------------GRRPKAGIPEDVIADMTEVNATLSKGRKKR----PLPDSLASADDIAAMTLAGSHPLHKTTAGGIAAIDVNPQQQGVVVTAGVDTTLQLFDYLQTRVLASLEGHTKRCTGVSWVAADVIVSSSADKTARVWRAGGEGGSEWSCASVLRDHTAEVVGVTTHPSRRYFVTGSTDASWAFYDVASLTCLRQVGADEGPGEPYTCLQFHPDGLILGTGTEGKAIRIWEVKAQKAVAACEGHAGAIRSLAFSENGYHMAS 405          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A7S0IDW5_MICPS (Pre-mRNA-processing factor 19 n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDW5_MICPS)

HSP 1 Score: 155 bits (392), Expect = 4.600e-38
Identity = 131/425 (30.82%), Postives = 204/425 (48.00%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSAPKSSVMS-SFVEIGRTA-VDGTDVE-LRAVCVNGGKA---IVGCSNGKLHVIEQDM-KVSHSEEAHSNGVSAM-YWDEKIFTGGEDGVVKVWDDEMNCKAIFD-GKGAVQDIERHPLKSVMYCSRADG---FELRNVEDGVVIGSAKVDNECGAIHPDGLLLATGGK-KGLRMWDFSSLKQVAELQAE--GVIQVAMSEKGYYMVS 410
            M+C++SG  P++PV+S K+GHL+ER+LI K L   G +CP T  P+   DLLPVK+   + P     +S+P +L     EWD L LE H  +  LH TRQEL+ ALY+ DA+ RVI++L KERDE R A   A A G +                ++ P+++            AE +     D K++     P+ I +   K + EL + RK R+ S+  +S      +E+G TA    T  + +RA+ VN   A     G ++G L + +    K       H   V+ + +  + I T   D  VK+W       A+    +G V  +  HP+ +       DG   F      + + +     +  CG  HPDGL+L TG     +++WD  + K  A+++     V  ++ SE GYY+ +
Sbjct:    1 MFCSISGTTPEDPVISSKTGHLYERSLITKALQETG-ECPVTKTPMTLEDLLPVKSSTTVKPRTTAAASIPGLLSIFHNEWDALMLETHELRVDLHGTRQELSHALYQHDAACRVISRLMKERDEAREALANARAAGPS------------AAPGKRGPSSDA-----------AEVDGDAAGDGKKQRSGVPPEAIDAMTAK-SKELSKARKKREISSTLASPEDVGKMEVGTTAPCHATKAKGIRAIRVNPSNADEVATGGADGSLALFDAAKGKRGALMTGHKKAVTDVAFAGDAILTSSADKTVKIWRGGAEVAAVAGVHEGEVVAVSAHPMNAYAVSIGGDGAWAFMDVGAAECLSVQRDGAEYTCGGFHPDGLILGTGAADSSVKIWDVKTSKVAAKVEGHVGAVTSMSFSENGYYLAT 400          
BLAST of Gcaud8621.t1 vs. uniprot
Match: A0A150GX05_GONPE (Pre-mRNA-processing factor 19 n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GX05_GONPE)

HSP 1 Score: 155 bits (392), Expect = 8.340e-38
Identity = 136/443 (30.70%), Postives = 211/443 (47.63%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQAQKLAIELQETRKSRKSSAPKSSVMSSFVEIGRTAVDG-------TDVELRAVCVNG---GKAIVGCSNGKLHVIEQ-DMKVSHSEEAHSNGVSAMYW--DEKIFTGGEDGVVKVWDDEMN---------CKAIF-DGKGAVQDIERHPLKSVMYCSRADG----FELRNVEDGVVIGSAKVDNE---CGAIHPDGLLLATGGK-KGLRMWDFSSLKQVAELQAE-GVIQ-VAMSEKGYYMVS 410
            M+C++SG +P++ VVSVKSGHLFE++LI+K +   G KCP TGEPL + DLLP+K  + + P     +S+P +L     EWD   LEL+  + QLHQTRQEL+ ALY+ DA+ RVIA+L KERDE RAA     A+   + A + A       A    PA  G                        R    +PD +I+   ++   L + RK R    P    +++  ++   ++ G       T   + A+ VN    G  +    +G L + +    +V HS E HS   + + +   + I +   D   + W  +           C ++  D    V  +  HP +     + +D     ++  ++     +G+ +   E   C   HPDGL+L TG + K +R+W+  S K VA  +   G I+ +A SE GY+M S
Sbjct:    1 MFCSISGVVPEQGVVSVKSGHLFEKSLIDKYVRETG-KCPVTGEPLSTEDLLPLKVNKTVKPRTAPATSIPGLLSLFHDEWDANMLELYNTRTQLHQTRQELSHALYQHDAATRVIARLMKERDEARAA----LADLKQQYAADLAAAQSARAAADVAPAEGGR-----------------------RAKAGIPDDVIADMAEVNATLSKGRKKR----PLPDSLATADDLASLSLSGSHPLHKTTAGGIAAMDVNPQQQGVVVTAGVDGSLQLFDYLQGRVLHSLEGHSKRCTGVAYIASDLIVSTSADRTARAWRSKAEGGEGEVSWQCASVLKDHTAEVVGVTVHPSRRYFVTASSDASWAFYDTASLTCLRQVGADEGPGEPYTCLQFHPDGLILGTGTEGKAIRIWEVKSQKPVAACEGHAGAIRFLAFSENGYHMAS 411          
BLAST of Gcaud8621.t1 vs. uniprot
Match: M5XA92_PRUPE (Pre-mRNA-processing factor 19 n=12 Tax=Prunus TaxID=3754 RepID=M5XA92_PRUPE)

HSP 1 Score: 155 bits (391), Expect = 1.960e-37
Identity = 136/452 (30.09%), Postives = 210/452 (46.46%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSDLLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQELATALYRCDASARVIAKLEKERDELR-----AAREAATANGDT--EQADEHANGAEVLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGI----ISQAQKLAIELQETRKSRKSSAPKSSV--MSSFVEIGRTAVDGTDVE-LRAVCVNGGKAIVGCSNGKLHVIEQDM---KVSHSEEAHS---NGVSAMYWDEKIFTGGEDGVVKVW----DDEMNCKAIF-DGKGAVQDIERHPLKSVMYCSRADG----------FELRNVEDGVVIGSAKVDNECGAIHPDGLLLATGGKKGL-RMWDFSSLKQVAELQAE--GVIQVAMSEKGYYMVSIGTE 414
            M C++SG +P++PVVS KSG LFE+ LIE+ ++  G KCP TGEPL + D++PV+ G+ + P P + +S+P +L   + EWD L L     ++QLH  RQEL+ ALY+ DA+ RVIA+L+KERDE R     A R+   +   T    A  H+NG         KPA                      +DQ   G+  +  GI    +    +    L + RK R+ S   + V  +  + +I    +  T    + ++ ++  K I+       + +  D    ++  +   HS   N V  +  D+ + TG  D  V++W    D   NC  +  D    VQ +  H   +    +  DG            L  VED     SA       A HPDGL+L TG   GL ++WD  S   VA+ +     V  ++ SE GY++ +  ++
Sbjct:   51 MNCSISGEVPEDPVVSKKSGLLFEKRLIERHISEYG-KCPITGEPLTADDIVPVRTGKIVRPRPAQAASIPGMLGMFQLEWDSLMLANFAMEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLALAERQIPMSAPSTIAANASVHSNG---------KPA---------------------ADDQLGPGLRNVRPGISPNILDDMTECNSVLSQQRKRRQISPTLAPVDALERYTQISSHPLHKTSKPGILSIDIHSNKNIIATGGVDTNAVIFDQPSGQIISTLSGHSKKVNSVKIVPRDDLLITGSADKTVRIWQGSDDGNYNCNHVLKDHTAEVQAVTVHATNNYFVTASLDGTWCFYDLSSGLCLTQVEDP----SASEGYTSLAFHPDGLILGTGTTGGLVKIWDVKSQTNVAKFEGHVGAVTSISFSENGYFLATAASD 467          
The following BLAST results are available for this feature:
BLAST of Gcaud8621.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYQ5_9FLOR9.770e-18754.49Pre-mRNA-processing factor 19 n=1 Tax=Gracilariops... [more]
R7Q9H2_CHOCR1.020e-6335.17Pre-mRNA-processing factor 19 n=1 Tax=Chondrus cri... [more]
A0A061S8V8_9CHLO7.760e-3932.21Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis ... [more]
A0A6A6UZL8_9PLEO1.350e-3830.73Pre-mRNA-processing factor 19 n=1 Tax=Sporormia fi... [more]
A0A8J4PTV0_9MYCE1.450e-3831.88Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A7S0G9U0_9RHOD3.000e-3832.73Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=R... [more]
A8I9S6_CHLRE4.030e-3830.68Pre-mRNA-processing factor 19 n=3 Tax=Chlamydomona... [more]
A0A7S0IDW5_MICPS4.600e-3830.82Pre-mRNA-processing factor 19 n=3 Tax=Micromonas T... [more]
A0A150GX05_GONPE8.340e-3830.70Pre-mRNA-processing factor 19 n=1 Tax=Gonium pecto... [more]
M5XA92_PRUPE1.960e-3730.09Pre-mRNA-processing factor 19 n=12 Tax=Prunus TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..194
NoneNo IPR availablePANTHERPTHR43995:SF3PRE-MRNA-PROCESSING FACTOR 19 HOMOLOG 2coord: 351..505
coord: 1..128
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 275..304
score: 9.572873
NoneNo IPR availableCDDcd16656RING-Ubox_PRP19coord: 2..55
e-value: 6.68519E-22
score: 86.8654
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..54
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 268..304
e-value: 0.028
score: 23.6
coord: 346..381
e-value: 3.7
score: 13.4
coord: 384..420
e-value: 94.0
score: 4.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 273..304
e-value: 0.025
score: 15.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 275..304
score: 11.44416
IPR003613U-box domainSMARTSM00504Ubox_2coord: 1..67
e-value: 1.5E-10
score: 51.1
IPR003613U-box domainPROSITEPS51698U_BOXcoord: 1..71
score: 12.058455
IPR013915Pre-mRNA-splicing factor 19PFAMPF08606Prp19coord: 67..130
e-value: 4.9E-22
score: 77.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 215..504
e-value: 8.2E-27
score: 95.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..60
e-value: 1.7E-18
score: 68.0
IPR038959Pre-mRNA-processing factor 19PANTHERPTHR43995PRE-MRNA-PROCESSING FACTOR 19coord: 351..505
coord: 1..128
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 240..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_329_length_29763_cov_4.543981contigNODE_329_length_29763_cov_4.543981:21449..22975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8621.t1Gcaud8621.t1Gracilaria caudata M_176_S67 malemRNANODE_329_length_29763_cov_4.543981 21449..22975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8621.t1 ID=Gcaud8621.t1|Name=Gcaud8621.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=509bp
MYCALSGNIPKEPVVSVKSGHLFERTLIEKQLAVNGNKCPETGEPLFSSD
LLPVKNGEFITPLPPEKSSMPQVLDHVRAEWDRLTLELHTAQKQLHQTRQ
ELATALYRCDASARVIAKLEKERDELRAAREAATANGDTEQADEHANGAE
VLRAQRKKPANEGEEDNEQTEKNDAEPETQNCNDQKERGVVTLPDGIISQ
AQKLAIELQETRKSRKSSAPKSSVMSSFVEIGRTAVDGTDVELRAVCVNG
GKAIVGCSNGKLHVIEQDMKVSHSEEAHSNGVSAMYWDEKIFTGGEDGVV
KVWDDEMNCKAIFDGKGAVQDIERHPLKSVMYCSRADGFELRNVEDGVVI
GSAKVDNECGAIHPDGLLLATGGKKGLRMWDFSSLKQVAELQAEGVIQVA
MSEKGYYMVSIGTEEALVWDLRKQAVVGSVGTHGVCGVGLDEFGEYGCVV
GADGLNVFAVKKKAKTLARIEAKAACAERLGVAWGAQSSFVVIGGSDGVL
RKFGAAAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR003613Ubox_domain
IPR013915Pre-mRNA_splic_Prp19
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR038959Prp19
IPR011047Quinoprotein_ADH-like_supfam