Gcaud8516.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8516.t1
Unique NameGcaud8516.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length356
Homology
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR)

HSP 1 Score: 374 bits (960), Expect = 1.070e-125
Identity = 191/358 (53.35%), Postives = 242/358 (67.60%), Query Frame = 0
Query:    1 MVFRFFTFAAVAAFSVLGAQATPTPQQ-CNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDPPTPCEIAFEECEFTFSEQRGLT--AFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN-RVVNRNNVPRSANKCVVFRT 354
            M   FF    +A  S +    TP+P   C I +VCY++DQS SI   EY  EQ FV +I++ I++ ++ DPFNSAVAFS + +TIQ  T +L  F+ +V   R F   T IS GL QC+ +LEG QG+R + L+TDG+   SD   +  AA D   A I IV VGIG+ V+ D L  L  +P  +I+  FDDLD KI  V  AIC+ +   T CE A+++C F FS   G     F I+GEPD +FT RVVPK  +Y LGTLNTNN+VPEFI+ +  RPITEFGSQRFTPTHFKP+WI +ERGSG+GHQTFQG+Q +VA DKC+R++FTSFQE+  N +VVNRNNVP S NKCVVFRT
Sbjct:    1 MTSSFFLATVLAVISAVALGQTPSPSPACQIKHVCYILDQSGSINDNEYALEQRFVNKIADIIDSTSITDPFNSAVAFSRSVRTIQPATNNLHTFKDAVSKERIFRSTTRISFGLRQCQRILEGKQGSRTMVLLTDGEPDSSDRLQTINAAEDITNAGIGIVAVGIGNSVNADLLRQLVPEPEFYIDTRFDDLDSKIQVVANAICNIIPEKTECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENKCVVFRT 358          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR)

HSP 1 Score: 359 bits (922), Expect = 4.710e-120
Identity = 185/354 (52.26%), Postives = 251/354 (70.90%), Query Frame = 0
Query:    4 RFFTFAAVAAFSVLGAQA--TPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAIC-DAVDPPTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIRENRVVNRNNVPRSANKCVVFRT 354
            RFF   AV   ++LG      P  + C I+NVCY++DQS S+ +++Y +E++FV++I+ ++E  + +DPFNSAVAFS +A+ IQDPT+DL  F  +V G R F  GT  ST L++C+ LLE A+G++ I LITDG    ++   +   A + K     IVTVG+GS + + FL  +AS P LF+  +FD+LD+ I +VV  IC D ++  T C  AF+ECEFTF  + GL+ F I+G PD +FT R+V KD S  LG LN+NNIVPEFI+D+   PIT FGSQRFTPTHFKP+ +M  +GSGIGHQTF G+Q QVA+D+CIR++FT FQEIR N+++NRN+VPRS NKCVVFRT
Sbjct:    3 RFFVLFAVFT-TILGTVLGQPPVEKPCRIDNVCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLNKFVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDGGFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIAS-PDLFVGTSFDNLDEVIMQVVSDICVDIIE--TDCSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNGVFPITNFGSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNKLINRNDVPRSENKCVVFRT 352          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IGH1_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR)

HSP 1 Score: 358 bits (919), Expect = 1.810e-119
Identity = 186/359 (51.81%), Postives = 237/359 (66.02%), Query Frame = 0
Query:    1 MVFRFFTFAAVAAFSVLGAQATPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQ--DFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDPPTPCEIAFEECEFTFS--EQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN-RVVNRNNVPRSANKCVVFRT 354
            M  RFF    +A  S +    T +P  C I +VCY++DQS SI   EY  EQNFV +I+  IE+ +V DPFNSAVAFS N + IQ PT +L  F+ +V     F   T IS GL++C+ +LEG QG+R + L+TDG     D+  +  AA D K A I IV VGIG    +  D L  L  +P  +I+  FDDLD KI  V  AIC+     T CE A+ +C F FS  +      F I+GEPD + T +VVPK  +Y LGTLNTNN+VPEFI+++    ITEFGSQRFTPTHFKP+WI +ERGSG+GHQTFQG+Q ++A DKC+R++FTSFQEI +N +VVNRNNVP S +KCVVFRT
Sbjct:    1 MTSRFFLVTVLAVISTVAFGRTQSPPACQIKHVCYILDQSGSINDNEYDLEQNFVKKIARIIESTSVTDPFNSAVAFSRNVRIIQLPTNNLKTFEDAVSEEERFRSTTRISLGLSECQRILEGKQGSRTMVLLTDGVPDSDDLSQTINAAEDIKNAGIGIVAVGIGISKGKGVDLLRQLVREPEFYIDTRFDDLDSKIQVVANAICNITLVKTECEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSLITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHKCVVFRT 359          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR)

HSP 1 Score: 229 bits (584), Expect = 9.060e-69
Identity = 136/348 (39.08%), Postives = 193/348 (55.46%), Query Frame = 0
Query:   24 TPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTA-FQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDP-----------PTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFI-DDSDARPIT-EFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIR---ENRVVNRNNVPRSANKCVVFRT 354
            T + C+IN+VC+V+D+S SI S+EY  EQ FV+ +S  I +   N    SA  F+ +A  IQ  T +L   F   +  ++   G T +  GLN C   + G  GNRVI LITDG    +  P +   A   KAA + IVT+G+GS V +D+L  LA+ P+ FI + F  L   +  V ++ CD V+            P PCE A++ C+F F  +  +  F +   PD  FT ++V ++    +G LNTN+IV EFI DD    PIT E   Q F+ T FKP  +     SGI H++FQ DQ  +ARD+C+R+F +SFQ +     N V+    V R+ NKC+VFRT
Sbjct:   33 TSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISS-RTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGD--NGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVPDITPTPIPDPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEPAIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTRADNKCMVFRT 377          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 6.410e-29
Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 0
Query:  209 PPT--PCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFID-DSDARPITEFGS-QRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN---RVVNRNNVPRSANKCVVFRT 354
            PPT   CE A+++C+F F +   +  F + G PD  FT R+V +     +G LNTN I+PEFI+ D     IT   +   F PT FKP  I  + GSG+G+QTFQG+Q   AR++C+R+FFTSFQ +       V+   N  R+ NKCVVFRT
Sbjct:  372 PPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRT 524          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 8.730e-22
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 0
Query:  210 PTP------CEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFID-DSDARPITEF-GSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN---RVVNRNNVPRSANKCVVFRTM 355
            PTP      C+ A++ C F F  +  +  F + G  + AF+  +  ++ +  LG LN+NN+  E  + D +   IT    SQ F+ T FKPF +   +GSGIGH+TFQ DQ +V R +C+R+FF+ FQ +       VV      R  NKCVVF+T+
Sbjct:  446 PTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKTV 602          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A0L8G8V9_OCTBM (Uncharacterized protein n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8G8V9_OCTBM)

HSP 1 Score: 67.0 bits (162), Expect = 1.740e-8
Identity = 83/306 (27.12%), Postives = 134/306 (43.79%), Query Frame = 0
Query:   32 NVCYVIDQSASIGSTEYQQEQNFVVR------ISNEIETIAVNDPFNSA-VAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLN----QCRTLLEGAQ----GNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAICDAVD-------PPTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYG--LGTLNTNNIVPEFID----DSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTF 308
            ++ +++D+S S+G   Y + + F+ +      IS     ++V    NSA V F  NA T ++P   +     S+G N    GGT  STG+N       +L  GA+      RV+ L+TDGQ+  ++   +  AA  AK   I+I +VG+GS+V  D L+ +A   S +F  A FDD+D  + E+++  C A         P        ++ E   +     T   +   P    TT VV  + S     G+ N +N      +     +D RP+  F        H +P ++  E       Q F
Sbjct:   62 DLVFLLDESGSVGQANYNKVKQFLEKSIIRLPISPSQFRVSVTTFSNSAKVLFYLNAFTSKNP---MIQKIRSMGYN---GGGTETSTGINAVVNDVFSLNNGAKLMKDAPRVLVLVTDGQS--NNRAQTVAAANIAKQQGIEIFSVGVGSNVDNDELLQVAETCSRVFSLATFDDMDNFLHELIKNACGAKSTIEIPDIPSNSTNSTIKDTEIKRNVPENGTNIGVKVSPKGNGTTIVVETNCSVVKIFGSYNDSNPSESVFEITGTAADGRPMVLFVK---ADKHGRPLYLTFEASKVNTSQKF 356          
BLAST of Gcaud8516.t1 vs. uniprot
Match: UPI001E1E11E5 (collagen alpha-4(VI) chain-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E11E5)

HSP 1 Score: 63.9 bits (154), Expect = 2.140e-7
Identity = 49/178 (27.53%), Postives = 84/178 (47.19%), Query Frame = 0
Query:   30 INNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNA--QTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAIC 204
            I+N+C+V+D S S G+  + ++  FV  + NE             + F+  A  +       D  +   +V   ++ NG T+ + GL+  R+ L  +  N+V+ ++TDGQ+   ++  + Q+A       I+   +GIG  V  D L  +ASD   +F    FD L+     VV  IC
Sbjct:  217 ISNICFVLDSSGSEGAVNFHKQLEFVNMVINEFSFGNGVKTHICLITFASGAFHEIHLKQYDDKNSIMTNVLKVQWRNGETMTNLGLDAARSELSQSHRNKVVIVLTDGQSNNPEL--TKQSANSLHRHGIETFAIGIGHMVDNDELKVIASDHKHVFKVGTFDQLEHIQQHVVNKIC 392          
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A8B8E5U5_CRAVI (collagen alpha-4(VI) chain-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E5U5_CRAVI)

HSP 1 Score: 60.8 bits (146), Expect = 2.140e-6
Identity = 52/187 (27.81%), Postives = 88/187 (47.06%), Query Frame = 0
Query:   32 NVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFS--GNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLL---EGAQGN--RVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINA-NFDDLDQKIPEVVQAICDAVDPP 210
            ++ +V+D S S G   +++E NF        +    +  F   V FS  G ++   +   DL +    +    +  G T   +GL+  +       GA+ N  ++  ++TDGQ+       + Q A + KA  + ++++GIGS VSQ  LM +A+DP    N  NFD L+    E+  A C   +PP
Sbjct:  602 DIVFVLDASGSEGVENFKKELNFTAEFMKGFQIGRQHVQFG-LVTFSSYGRSEFYFNTYHDLQSILHKLDTIHYTGGSTHTESGLSSAKFQFYSHHGARPNAQKIAIVLTDGQS--YSTTRTIQKANELKAMGVKVISLGIGSSVSQAELMGIATDPQHVFNVTNFDTLNSIQYEIKTAACAVPNPP 785          
BLAST of Gcaud8516.t1 vs. uniprot
Match: UPI001458539C (collagen alpha-1(XII) chain-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001458539C)

HSP 1 Score: 58.9 bits (141), Expect = 8.080e-6
Identity = 88/330 (26.67%), Postives = 138/330 (41.82%), Query Frame = 0
Query:    7 TFAAVAAFSVLGAQATPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFN---SAVAFSGNAQ------TIQDPTQDLTAFQASVGGNRFFNGGTV-ISTGLNQCR----TLLEGAQGN--RVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAICDAVDPP-----TPCEIAFEECEFTF--SEQRGLTAFDISGEPDTAFTT--RVVPKDVSYGLGTLNTNNIVPEFIDDSD----------------ARPITEFGSQ-----RFTPTH 289
            +F A+A+     A  T +  + +  +V +++D S S G+T +Q+E  FV   SN +  + +  P N     V FS  AQ      T Q     +   Q     N  + G T     GL   R    T   G++ N  ++  ++TDGQ+    +  S   AT  K   + I++VGIG+ VS+  +  +ASD + +F  A FD L     E+    C    PP     T C     +  F    S   G   F+   +  T F T  ++ P DV +GL T + + I   +++  +                +   TE G Q     +FTPTH
Sbjct:  197 SFLALASIQHNLASTTCSSCKTSQADVVFILDSSGSEGNTNFQKELQFV---SNFVTNVHIG-PQNIQVGLVTFSDIAQNEFYMNTYQTKRDMIAKLQ-----NVSYRGSTTHTELGLQYARQDQFTSSHGSRPNVKKIAVVLTDGQSHSHTLTLSE--ATKLKQFGVTIISVGIGTAVSETEINGIASDLNHVFTVATFDALHTIQSELENTACGGTVPPPTTVSTECGSKPADIVFVLDSSGSEGADNFNKQLQFMTNFVTNFQIGPHDVQFGLVTFSIDAINEFYLNTYNNQQDISNKLTNIAYVGSTTHTELGLQYARQFQFTPTH 515          
The following BLAST results are available for this feature:
BLAST of Gcaud8516.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IQI6_9FLOR1.070e-12553.35VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGK2_9FLOR4.710e-12052.26Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariop... [more]
A0A2V3IGH1_9FLOR1.810e-11951.81VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IFK7_9FLOR9.060e-6939.08Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis ... [more]
A0A2V3J5W6_9FLOR6.410e-2944.44Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IP66_9FLOR8.730e-2237.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A0L8G8V9_OCTBM1.740e-827.12Uncharacterized protein n=2 Tax=Octopus bimaculoid... [more]
UPI001E1E11E52.140e-727.53collagen alpha-4(VI) chain-like n=1 Tax=Mercenaria... [more]
A0A8B8E5U5_CRAVI2.140e-627.81collagen alpha-4(VI) chain-like n=1 Tax=Crassostre... [more]
UPI001458539C8.080e-626.67collagen alpha-1(XII) chain-like isoform X1 n=3 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 30..204
e-value: 7.1E-18
score: 75.4
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 32..193
e-value: 2.9E-18
score: 66.7
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 32..203
score: 15.993888
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 24..215
e-value: 1.4E-27
score: 98.7
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 22..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..355
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableCDDcd00198vWFAcoord: 32..181
e-value: 2.38399E-15
score: 71.0578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_243_length_34547_cov_4.802386contigNODE_243_length_34547_cov_4.802386:513..1580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8516.t1Gcaud8516.t1Gracilaria caudata M_176_S67 malemRNANODE_243_length_34547_cov_4.802386 513..1580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8516.t1 ID=Gcaud8516.t1|Name=Gcaud8516.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=356bp
MVFRFFTFAAVAAFSVLGAQATPTPQQCNINNVCYVIDQSASIGSTEYQQ
EQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGG
NRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAA
TDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVV
QAICDAVDPPTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPK
DVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERG
SGIGHQTFQGDQAQVARDKCIRIFFTSFQEIRENRVVNRNNVPRSANKCV
VFRTM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf