Gcaud8516.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IQI6_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR) HSP 1 Score: 374 bits (960), Expect = 1.070e-125 Identity = 191/358 (53.35%), Postives = 242/358 (67.60%), Query Frame = 0
Query: 1 MVFRFFTFAAVAAFSVLGAQATPTPQQ-CNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDPPTPCEIAFEECEFTFSEQRGLT--AFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN-RVVNRNNVPRSANKCVVFRT 354
M FF +A S + TP+P C I +VCY++DQS SI EY EQ FV +I++ I++ ++ DPFNSAVAFS + +TIQ T +L F+ +V R F T IS GL QC+ +LEG QG+R + L+TDG+ SD + AA D A I IV VGIG+ V+ D L L +P +I+ FDDLD KI V AIC+ + T CE A+++C F FS G F I+GEPD +FT RVVPK +Y LGTLNTNN+VPEFI+ + RPITEFGSQRFTPTHFKP+WI +ERGSG+GHQTFQG+Q +VA DKC+R++FTSFQE+ N +VVNRNNVP S NKCVVFRT
Sbjct: 1 MTSSFFLATVLAVISAVALGQTPSPSPACQIKHVCYILDQSGSINDNEYALEQRFVNKIADIIDSTSITDPFNSAVAFSRSVRTIQPATNNLHTFKDAVSKERIFRSTTRISFGLRQCQRILEGKQGSRTMVLLTDGEPDSSDRLQTINAAEDITNAGIGIVAVGIGNSVNADLLRQLVPEPEFYIDTRFDDLDSKIQVVANAICNIIPEKTECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENKCVVFRT 358
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IGK2_9FLOR (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 359 bits (922), Expect = 4.710e-120 Identity = 185/354 (52.26%), Postives = 251/354 (70.90%), Query Frame = 0
Query: 4 RFFTFAAVAAFSVLGAQA--TPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAIC-DAVDPPTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIRENRVVNRNNVPRSANKCVVFRT 354
RFF AV ++LG P + C I+NVCY++DQS S+ +++Y +E++FV++I+ ++E + +DPFNSAVAFS +A+ IQDPT+DL F +V G R F GT ST L++C+ LLE A+G++ I LITDG ++ + A + K IVTVG+GS + + FL +AS P LF+ +FD+LD+ I +VV IC D ++ T C AF+ECEFTF + GL+ F I+G PD +FT R+V KD S LG LN+NNIVPEFI+D+ PIT FGSQRFTPTHFKP+ +M +GSGIGHQTF G+Q QVA+D+CIR++FT FQEIR N+++NRN+VPRS NKCVVFRT
Sbjct: 3 RFFVLFAVFT-TILGTVLGQPPVEKPCRIDNVCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLNKFVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDGGFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIAS-PDLFVGTSFDNLDEVIMQVVSDICVDIIE--TDCSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNGVFPITNFGSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNKLINRNDVPRSENKCVVFRT 352
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IGH1_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR) HSP 1 Score: 358 bits (919), Expect = 1.810e-119 Identity = 186/359 (51.81%), Postives = 237/359 (66.02%), Query Frame = 0
Query: 1 MVFRFFTFAAVAAFSVLGAQATPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQ--DFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDPPTPCEIAFEECEFTFS--EQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFIDDSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN-RVVNRNNVPRSANKCVVFRT 354
M RFF +A S + T +P C I +VCY++DQS SI EY EQNFV +I+ IE+ +V DPFNSAVAFS N + IQ PT +L F+ +V F T IS GL++C+ +LEG QG+R + L+TDG D+ + AA D K A I IV VGIG + D L L +P +I+ FDDLD KI V AIC+ T CE A+ +C F FS + F I+GEPD + T +VVPK +Y LGTLNTNN+VPEFI+++ ITEFGSQRFTPTHFKP+WI +ERGSG+GHQTFQG+Q ++A DKC+R++FTSFQEI +N +VVNRNNVP S +KCVVFRT
Sbjct: 1 MTSRFFLVTVLAVISTVAFGRTQSPPACQIKHVCYILDQSGSINDNEYDLEQNFVKKIARIIESTSVTDPFNSAVAFSRNVRIIQLPTNNLKTFEDAVSEEERFRSTTRISLGLSECQRILEGKQGSRTMVLLTDGVPDSDDLSQTINAAEDIKNAGIGIVAVGIGISKGKGVDLLRQLVREPEFYIDTRFDDLDSKIQVVANAICNITLVKTECEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSLITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHKCVVFRT 359
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IFK7_9FLOR (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 229 bits (584), Expect = 9.060e-69 Identity = 136/348 (39.08%), Postives = 193/348 (55.46%), Query Frame = 0
Query: 24 TPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNAQTIQDPTQDLTA-FQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINANFDDLDQKIPEVVQAICDAVDP-----------PTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFI-DDSDARPIT-EFGSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIR---ENRVVNRNNVPRSANKCVVFRT 354
T + C+IN+VC+V+D+S SI S+EY EQ FV+ +S I + N SA F+ +A IQ T +L F + ++ G T + GLN C + G GNRVI LITDG + P + A KAA + IVT+G+GS V +D+L LA+ P+ FI + F L + V ++ CD V+ P PCE A++ C+F F + + F + PD FT ++V ++ +G LNTN+IV EFI DD PIT E Q F+ T FKP + SGI H++FQ DQ +ARD+C+R+F +SFQ + N V+ V R+ NKC+VFRT
Sbjct: 33 TSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISS-RTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGD--NGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVPDITPTPIPDPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEPAIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTRADNKCMVFRT 377
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 127 bits (318), Expect = 6.410e-29 Identity = 68/153 (44.44%), Postives = 92/153 (60.13%), Query Frame = 0
Query: 209 PPT--PCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFID-DSDARPITEFGS-QRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN---RVVNRNNVPRSANKCVVFRT 354
PPT CE A+++C+F F + + F + G PD FT R+V + +G LNTN I+PEFI+ D IT + F PT FKP I + GSG+G+QTFQG+Q AR++C+R+FFTSFQ + V+ N R+ NKCVVFRT
Sbjct: 372 PPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRT 524
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 107 bits (266), Expect = 8.730e-22 Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 0
Query: 210 PTP------CEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYGLGTLNTNNIVPEFID-DSDARPITEF-GSQRFTPTHFKPFWIMQERGSGIGHQTFQGDQAQVARDKCIRIFFTSFQEIREN---RVVNRNNVPRSANKCVVFRTM 355
PTP C+ A++ C F F + + F + G + AF+ + ++ + LG LN+NN+ E + D + IT SQ F+ T FKPF + +GSGIGH+TFQ DQ +V R +C+R+FF+ FQ + VV R NKCVVF+T+
Sbjct: 446 PTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKTV 602
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A0L8G8V9_OCTBM (Uncharacterized protein n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8G8V9_OCTBM) HSP 1 Score: 67.0 bits (162), Expect = 1.740e-8 Identity = 83/306 (27.12%), Postives = 134/306 (43.79%), Query Frame = 0
Query: 32 NVCYVIDQSASIGSTEYQQEQNFVVR------ISNEIETIAVNDPFNSA-VAFSGNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLN----QCRTLLEGAQ----GNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAICDAVD-------PPTPCEIAFEECEFTFSEQRGLTAFDISGEPDTAFTTRVVPKDVSYG--LGTLNTNNIVPEFID----DSDARPITEFGSQRFTPTHFKPFWIMQERGSGIGHQTF 308
++ +++D+S S+G Y + + F+ + IS ++V NSA V F NA T ++P + S+G N GGT STG+N +L GA+ RV+ L+TDGQ+ ++ + AA AK I+I +VG+GS+V D L+ +A S +F A FDD+D + E+++ C A P ++ E + T + P TT VV + S G+ N +N + +D RP+ F H +P ++ E Q F
Sbjct: 62 DLVFLLDESGSVGQANYNKVKQFLEKSIIRLPISPSQFRVSVTTFSNSAKVLFYLNAFTSKNP---MIQKIRSMGYN---GGGTETSTGINAVVNDVFSLNNGAKLMKDAPRVLVLVTDGQS--NNRAQTVAAANIAKQQGIEIFSVGVGSNVDNDELLQVAETCSRVFSLATFDDMDNFLHELIKNACGAKSTIEIPDIPSNSTNSTIKDTEIKRNVPENGTNIGVKVSPKGNGTTIVVETNCSVVKIFGSYNDSNPSESVFEITGTAADGRPMVLFVK---ADKHGRPLYLTFEASKVNTSQKF 356
BLAST of Gcaud8516.t1 vs. uniprot
Match: UPI001E1E11E5 (collagen alpha-4(VI) chain-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E11E5) HSP 1 Score: 63.9 bits (154), Expect = 2.140e-7 Identity = 49/178 (27.53%), Postives = 84/178 (47.19%), Query Frame = 0
Query: 30 INNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFSGNA--QTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLLEGAQGNRVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAIC 204
I+N+C+V+D S S G+ + ++ FV + NE + F+ A + D + +V ++ NG T+ + GL+ R+ L + N+V+ ++TDGQ+ ++ + Q+A I+ +GIG V D L +ASD +F FD L+ VV IC
Sbjct: 217 ISNICFVLDSSGSEGAVNFHKQLEFVNMVINEFSFGNGVKTHICLITFASGAFHEIHLKQYDDKNSIMTNVLKVQWRNGETMTNLGLDAARSELSQSHRNKVVIVLTDGQSNNPEL--TKQSANSLHRHGIETFAIGIGHMVDNDELKVIASDHKHVFKVGTFDQLEHIQQHVVNKIC 392
BLAST of Gcaud8516.t1 vs. uniprot
Match: A0A8B8E5U5_CRAVI (collagen alpha-4(VI) chain-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E5U5_CRAVI) HSP 1 Score: 60.8 bits (146), Expect = 2.140e-6 Identity = 52/187 (27.81%), Postives = 88/187 (47.06%), Query Frame = 0
Query: 32 NVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFNSAVAFS--GNAQTIQDPTQDLTAFQASVGGNRFFNGGTVISTGLNQCRTLL---EGAQGN--RVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPSLFINA-NFDDLDQKIPEVVQAICDAVDPP 210
++ +V+D S S G +++E NF + + F V FS G ++ + DL + + + G T +GL+ + GA+ N ++ ++TDGQ+ + Q A + KA + ++++GIGS VSQ LM +A+DP N NFD L+ E+ A C +PP
Sbjct: 602 DIVFVLDASGSEGVENFKKELNFTAEFMKGFQIGRQHVQFG-LVTFSSYGRSEFYFNTYHDLQSILHKLDTIHYTGGSTHTESGLSSAKFQFYSHHGARPNAQKIAIVLTDGQS--YSTTRTIQKANELKAMGVKVISLGIGSSVSQAELMGIATDPQHVFNVTNFDTLNSIQYEIKTAACAVPNPP 785
BLAST of Gcaud8516.t1 vs. uniprot
Match: UPI001458539C (collagen alpha-1(XII) chain-like isoform X1 n=3 Tax=Pecten maximus TaxID=6579 RepID=UPI001458539C) HSP 1 Score: 58.9 bits (141), Expect = 8.080e-6 Identity = 88/330 (26.67%), Postives = 138/330 (41.82%), Query Frame = 0
Query: 7 TFAAVAAFSVLGAQATPTPQQCNINNVCYVIDQSASIGSTEYQQEQNFVVRISNEIETIAVNDPFN---SAVAFSGNAQ------TIQDPTQDLTAFQASVGGNRFFNGGTV-ISTGLNQCR----TLLEGAQGN--RVIALITDGQTAFSDIPASNQAATDAKAAEIDIVTVGIGSHVSQDFLMDLASDPS-LFINANFDDLDQKIPEVVQAICDAVDPP-----TPCEIAFEECEFTF--SEQRGLTAFDISGEPDTAFTT--RVVPKDVSYGLGTLNTNNIVPEFIDDSD----------------ARPITEFGSQ-----RFTPTH 289
+F A+A+ A T + + + +V +++D S S G+T +Q+E FV SN + + + P N V FS AQ T Q + Q N + G T GL R T G++ N ++ ++TDGQ+ + S AT K + I++VGIG+ VS+ + +ASD + +F A FD L E+ C PP T C + F S G F+ + T F T ++ P DV +GL T + + I +++ + + TE G Q +FTPTH
Sbjct: 197 SFLALASIQHNLASTTCSSCKTSQADVVFILDSSGSEGNTNFQKELQFV---SNFVTNVHIG-PQNIQVGLVTFSDIAQNEFYMNTYQTKRDMIAKLQ-----NVSYRGSTTHTELGLQYARQDQFTSSHGSRPNVKKIAVVLTDGQSHSHTLTLSE--ATKLKQFGVTIISVGIGTAVSETEINGIASDLNHVFTVATFDALHTIQSELENTACGGTVPPPTTVSTECGSKPADIVFVLDSSGSEGADNFNKQLQFMTNFVTNFQIGPHDVQFGLVTFSIDAINEFYLNTYNNQQDISNKLTNIAYVGSTTHTELGLQYARQFQFTPTH 515 The following BLAST results are available for this feature:
BLAST of Gcaud8516.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8516.t1 ID=Gcaud8516.t1|Name=Gcaud8516.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=356bpback to top |