Gcaud8495.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8495.t1
Unique NameGcaud8495.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length313
Homology
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A2V3IPL0_9FLOR (E3 ubiquitin-protein ligase UPL1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPL0_9FLOR)

HSP 1 Score: 245 bits (625), Expect = 1.020e-69
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0
Query:    4 RHVL---PNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            +H+L   PNFHDIEGQDPDYYKSLKWILENDCTGIIDY MSAEYDEFGKQT+IDL+PN R IPVTEENKAEYVR V EVRMTK IEKQIEAF EGFYEI+PLE C+I NE+ELELL+SGLPD+D+ DLKANVEYTGYTASS
Sbjct: 1496 KHILGMKPNFHDIEGQDPDYYKSLKWILENDCTGIIDYTMSAEYDEFGKQTVIDLIPNGRNIPVTEENKAEYVRHVTEVRMTKAIEKQIEAFKEGFYEIIPLEDCRIFNEVELELLMSGLPDIDMGDLKANVEYTGYTASS 1636          
BLAST of Gcaud8495.t1 vs. uniprot
Match: R7QHB8_CHOCR (HECT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHB8_CHOCR)

HSP 1 Score: 224 bits (572), Expect = 1.270e-62
Identity = 105/141 (74.47%), Postives = 125/141 (88.65%), Query Frame = 0
Query:    4 RHVL---PNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            +H+L   P +HDIE QDP+YY+SLKW++END TG++DY MSAEYDEFGKQ+++DLVPN R IPVTEENK EYVRLV EVRMTKTIEKQIEAF +GFYE++P +  KI NELELELL+SGLPD+D++DLKANVEYTGYTASS
Sbjct: 1524 KHILGLKPTYHDIEAQDPEYYRSLKWMMENDITGVLDYTMSAEYDEFGKQSVVDLVPNGREIPVTEENKGEYVRLVTEVRMTKTIEKQIEAFKKGFYELIPCDDIKIFNELELELLMSGLPDIDMADLKANVEYTGYTASS 1664          
BLAST of Gcaud8495.t1 vs. uniprot
Match: M2Y1F2_GALSU (Ubiquitin-protein ligase E3 (Fragment) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1F2_GALSU)

HSP 1 Score: 197 bits (501), Expect = 3.740e-53
Identity = 87/136 (63.97%), Postives = 115/136 (84.56%), Query Frame = 0
Query:    6 VLPNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            + PN+HD+E  DPDYYKSL+WILEND TG++D  MSAE DEFG   ++DL+PN RYIPVTEENK EYV+LV ++RMT++I+ QI +F EGF+E++  E  ++ NE+ELELL+SGLPD+D++DLKAN+EY+GYTASS
Sbjct: 1158 IKPNYHDLEALDPDYYKSLQWILENDITGLLDLTMSAEIDEFGTTKVVDLIPNGRYIPVTEENKVEYVKLVTDLRMTRSIQHQINSFLEGFHELIAQEDIRVFNEIELELLMSGLPDIDIADLKANIEYSGYTASS 1293          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A7S0BHY6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHY6_9RHOD)

HSP 1 Score: 182 bits (461), Expect = 1.080e-51
Identity = 85/141 (60.28%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    4 RHVL---PNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            +H+L   PN+HD+E  DPDYYKSL W+LEND  G++D   SAEYD+FG   ++DL+PN R +PV+ +NK EYV L+ ++R+TKTI+ QIE F  GF E++P E  KI NELELELL+SGLP++DV+DLKANVEY GYT SS
Sbjct:  140 KHILGIRPNYHDLEPIDPDYYKSLCWMLENDIEGVLDLTFSAEYDDFGVTKVVDLIPNGRRVPVSNDNKKEYVNLITDLRLTKTIKLQIEHFLNGFQELIPREDIKIFNELELELLMSGLPEIDVADLKANVEYLGYTLSS 280          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A7S3ED90_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED90_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 1.810e-48
Identity = 86/141 (60.99%), Postives = 111/141 (78.72%), Query Frame = 0
Query:    4 RHVL---PNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            +H+L   PN+HD+E  DPDYYKSL W+LEND  G++D   SAEYD+FG   ++DL+PN R +PVT +NK EYV L+ ++R+TKTI+ QIE F +GF E++P E  KI NELELELL+SGLP++DV+DLKANVEY GYT SS
Sbjct: 1470 KHILGIRPNYHDLEPIDPDYYKSLCWMLENDIEGVLDLTFSAEYDDFGVTKVVDLIPNGRRVPVTNDNKKEYVNLITDLRLTKTIKLQIEHFLKGFQELIPREDIKIFNELELELLMSGLPEIDVADLKANVEYLGYTISS 1610          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A7S2JQL3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JQL3_9EUKA)

HSP 1 Score: 164 bits (416), Expect = 1.160e-46
Identity = 79/141 (56.03%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    4 RHVLP---NFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            +H+L     +HD+E  D +YYKSLKWILEND +G++D   S E D+FG++ ++DL PN R I V+EENKAEYV L+ E +MT  I+ QI+ F +GF+E+VP    +I NE ELELLISGLPD+DV DL+AN EY GY A+S
Sbjct:   26 KHILSVPVTYHDMEAIDAEYYKSLKWILENDISGVLDLTFSHEVDDFGRREIVDLKPNGRNILVSEENKAEYVALISESKMTTAIKHQIQHFLQGFHELVPAHLVRIFNENELELLISGLPDIDVDDLRANTEYNGYAATS 166          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A7S0R0M1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R0M1_9CHLO)

HSP 1 Score: 166 bits (421), Expect = 2.100e-45
Identity = 80/132 (60.61%), Postives = 99/132 (75.00%), Query Frame = 0
Query:   10 FHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            + DIE  DPDYYK+LKW+LEND T ++D   SAE D FGK+ +IDL P+ R IPVTE NK EYV+LV   RMT  I++QIE F EGF+ ++P E   I N+ ELELLISGLP++DV DL+AN EYTGY A+S
Sbjct:  122 YEDIEAIDPDYYKNLKWMLENDITNVLDLNFSAELDHFGKRGVIDLKPDGRNIPVTEANKLEYVQLVSRHRMTTAIQEQIEMFKEGFHTLIPHELISIFNDRELELLISGLPEIDVDDLQANTEYTGYMAAS 253          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A5J4YU58_PORPP (E3 ubiquitin-protein ligase UPL2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU58_PORPP)

HSP 1 Score: 167 bits (424), Expect = 6.930e-43
Identity = 84/144 (58.33%), Postives = 107/144 (74.31%), Query Frame = 0
Query:    4 RHVL---PNFHDIEGQDPDYYKSLKWILENDCTGII---DYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYT-GYTAS 140
            +H+L   P+ HD+E  DPDYYKS+ WILEND T +    D  MSAEYDEFG   ++DL+PN R++ VT ENK  YV+ V ++R+TK IEKQIE F  GFY+IVP E   + NE ELELL+SG P++DV+DLKANVEY+ GY+AS
Sbjct: 1197 KHILGVKPSLHDLEPVDPDYYKSMVWILENDITDVFGEGDLTMSAEYDEFGANRVVDLIPNGRHVAVTNENKRAYVQHVTDLRLTKAIEKQIEHFLAGFYDIVPREQIALFNECELELLMSGTPEIDVADLKANVEYSAGYSAS 1340          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A0D2VPV4_CAPO3 (HECT-type E3 ubiquitin transferase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VPV4_CAPO3)

HSP 1 Score: 165 bits (417), Expect = 6.740e-42
Identity = 82/140 (58.57%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    4 RHVLPN---FHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYT--GYT 138
            +H+L     +HDIE  DPDY+KSLKWILEND T +ID   + E ++FG + ++DL PN + IPVTEENKAEYV+LV E R+T +I  QI+AF  GFY ++P E   I NE ELELLISGLP++DV DLKAN +YT  GYT
Sbjct: 4720 KHILGRPVTYHDIEATDPDYFKSLKWILENDITDVIDETFAVEVEDFGDKKMVDLKPNGQSIPVTEENKAEYVQLVTENRLTSSIRSQIDAFLTGFYGLLPKELIAIFNEQELELLISGLPEIDVEDLKANTDYTRGGYT 4859          
BLAST of Gcaud8495.t1 vs. uniprot
Match: A0A7J7IPJ6_9RHOD (E3 ubiquitin-protein ligase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPJ6_9RHOD)

HSP 1 Score: 164 bits (416), Expect = 8.240e-42
Identity = 75/136 (55.15%), Postives = 104/136 (76.47%), Query Frame = 0
Query:    6 VLPNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQTLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIVPLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASS 141
            + P++HDIE  DP+YY SL W+LEN+   ++D  MSAE D+FG+  ++DLVPN R +PVTEENK EYVRL+ E++MTK IE+Q+ AF EGF+E+VP     + ++ ELELLISGLP++D++DLK +  Y+GY  SS
Sbjct: 1425 LKPSYHDIEAIDPEYYASLVWMLENNIAHVLDLTMSAELDQFGELKVVDLVPNGRQVPVTEENKWEYVRLITELKMTKAIEQQLSAFLEGFHELVPPSLIAMFSDYELELLISGLPEIDIADLKIHTTYSGYRPSS 1560          
The following BLAST results are available for this feature:
BLAST of Gcaud8495.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPL0_9FLOR1.020e-6983.69E3 ubiquitin-protein ligase UPL1 n=1 Tax=Gracilari... [more]
R7QHB8_CHOCR1.270e-6274.47HECT domain-containing protein n=1 Tax=Chondrus cr... [more]
M2Y1F2_GALSU3.740e-5363.97Ubiquitin-protein ligase E3 (Fragment) n=1 Tax=Gal... [more]
A0A7S0BHY6_9RHOD1.080e-5160.28Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3ED90_9RHOD1.810e-4860.99Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S2JQL3_9EUKA1.160e-4656.03Hypothetical protein (Fragment) n=1 Tax=Cyanoptych... [more]
A0A7S0R0M1_9CHLO2.100e-4560.61Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A5J4YU58_PORPP6.930e-4358.33E3 ubiquitin-protein ligase UPL2 n=1 Tax=Porphyrid... [more]
A0A0D2VPV4_CAPO36.740e-4258.57HECT-type E3 ubiquitin transferase n=1 Tax=Capsasp... [more]
A0A7J7IPJ6_9RHOD8.240e-4255.15E3 ubiquitin-protein ligase n=1 Tax=Cyanidiococcus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000569HECT domainSMARTSM00119hect_3coord: 1..184
e-value: 8.8E-5
score: -106.0
IPR000569HECT domainPFAMPF00632HECTcoord: 9..142
e-value: 7.9E-30
score: 104.4
IPR000569HECT domainPROSITEPS50237HECTcoord: 1..142
score: 30.759144
NoneNo IPR availableGENE3D3.90.1750.10Hect, E3 ligase catalytic domainscoord: 85..119
e-value: 5.2E-34
score: 120.2
NoneNo IPR availableGENE3D3.30.2160.10Hect, E3 ligase catalytic domaincoord: 8..84
e-value: 5.2E-34
score: 120.2
NoneNo IPR availablePANTHERPTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEcoord: 9..141
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 8..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1702_length_8926_cov_3.984833contigNODE_1702_length_8926_cov_3.984833:4216..5460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8495.t1Gcaud8495.t1Gracilaria caudata M_176_S67 malemRNANODE_1702_length_8926_cov_3.984833 4216..5460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8495.t1 ID=Gcaud8495.t1|Name=Gcaud8495.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=313bp
XASRHVLPNFHDIEGQDPDYYKSLKWILENDCTGIIDYKMSAEYDEFGKQ
TLIDLVPNRRYIPVTEENKAEYVRLVIEVRMTKTIEKQIEAFNEGFYEIV
PLEACKISNELELELLISGLPDVDVSDLKANVEYTGYTASSRRSYMEVKV
ASANLHGIRLDPFTALARASASSELEEIARTELVWCDCNSAFVSPFEVPL
NNDALPKCEFCLLLYSKSSRSDELRKKQLARHRRLLAAKGAVQTGWCLAD
EDWTPVYHSKIVEPYDHPNEDVLFEETSIRAENLYGMDENRGLRFEAFRY
NFSGPHIPLGLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
IPR035983Hect_E3_ubiquitin_ligase