Gcaud8469.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8469.t1
Unique NameGcaud8469.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length589
Homology
BLAST of Gcaud8469.t1 vs. uniprot
Match: A0A2V3IU02_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU02_9FLOR)

HSP 1 Score: 920 bits (2378), Expect = 0.000e+0
Identity = 452/591 (76.48%), Postives = 508/591 (85.96%), Query Frame = 0
Query:    1 MTTTTSDAPPLPPTKAKRELVIPSPTKPTTLPSPTKTVWPAPPPSTPVGNWVLDQHSFAPKRDYFIAYCAGLSRRRITDNLMWFRFPNVTDSKKQRVAVHYSRLAWVGGPLAELVASSAAK-KSEALGNDVAMGDGAA--DADGAHSDDKXXXXXXXXXXXXXXXXXXXXXXXIDKSVTVDEDPDHPYRRPDPYDLSEHDTPRTFAIVIKFLYCEEIRFNYLTFDELVSLATTAHRWHLTDLYHATFAYVMDQDLLAGGLGIRTFLPLVAHEETPESFRRYFCIAVGHHFDVLFPRLRAVKEANPSSTPMLWKTIFKQKMMSHVLHCVSLYSPGLYDEYLLDVILRYYERQSDASDDQLLGMLSQLSWDDIDVSGVFGSEGVSKFWSPRAIRLAALASYAPQTAALEVRIPWNIPLQRLLKQQVWSFQTEHVPCGPYVCYLHVRKGNGREVSLFVHIWNRENKPLKDDARHEIVRVKCRATEINCLCDSSKQWSDSSHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRHAHGENCGLAITTVLQFVNPVRQFEGPARRSAPRTLSPGRLQTPIQKKRSGSRMKLRESR 588
            MTT+T+  PPLP  KAKREL++ +PTKP+TLPSP KTVWPAPPPSTPVGNW+L QHSFAPKRDYF AYCAGL+RRR+ D+LMWFRFP+  D+K+QR+AVHYSRLAWVGGPLAELVAS   + KS  + +D +  +  A  DAD   +DD                          K VT DEDPDHPYRRPDP+DL+E DTPRTFAIVIKFLYCEEI+ NYLTFDELVSLA TAHRWHLTDLYHATF+YVMDQDLL+GGLGIRTFLPL AHEETPE FRRY CIAVGHHFDVL+PRLRA+K+ANP  TP+LW+T+F+QKM+SHVLH +SLYSP +Y++YLLDV+LRYYE  SD +DDQLLG+LSQLSWDD+DV+  FG++G SK+WS RA+RLAALA+YAPQT ALEVRIPWNIPLQRLLKQ VWSFQTEHVPCGPY+CYLHVRKG GREVSLFVHIWNRENKPL+D+ARHE+VRVKCRATE NC CDSSKQWSDS HGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWR+AHGE+CGLAITTVLQFVNP +QFEGPA+RS  RT SPGRLQ+PIQKKRSGSRMKLRESR
Sbjct:    1 MTTSTNATPPLP-QKAKRELLLSTPTKPSTLPSPKKTVWPAPPPSTPVGNWILHQHSFAPKRDYFKAYCAGLARRRVVDHLMWFRFPSAPDTKQQRIAVHYSRLAWVGGPLAELVASPTEQGKSATVQDDASKTEPPAKPDADMDEADDTAGQQSDVRMDDQ-------------KPVTPDEDPDHPYRRPDPFDLTEDDTPRTFAIVIKFLYCEEIQLNYLTFDELVSLAKTAHRWHLTDLYHATFSYVMDQDLLSGGLGIRTFLPLAAHEETPEQFRRYVCIAVGHHFDVLYPRLRAMKKANPEVTPLLWQTVFRQKMLSHVLHTISLYSPRMYNDYLLDVVLRYYEPHSDTTDDQLLGLLSQLSWDDMDVAAAFGADGASKWWSARAVRLAALAAYAPQTQALEVRIPWNIPLQRLLKQDVWSFQTEHVPCGPYICYLHVRKGAGREVSLFVHIWNRENKPLQDEARHEMVRVKCRATERNCRCDSSKQWSDSWHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRNAHGEHCGLAITTVLQFVNPKKQFEGPAKRS--RTSSPGRLQSPIQKKRSGSRMKLRESR 575          
BLAST of Gcaud8469.t1 vs. uniprot
Match: R7QK62_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK62_CHOCR)

HSP 1 Score: 678 bits (1750), Expect = 1.260e-238
Identity = 350/573 (61.08%), Postives = 417/573 (72.77%), Query Frame = 0
Query:   31 LPSPTKTVWPAPPPSTPVGNWVLDQHSFAPKRDYFIAYCAGLSRRRITDNLMWFRFPNVTDSKKQRVAVHYSRLAWVGGPLAELVASSAAKKSEALGNDVAMGDGAAD-------ADGAHSDDKXXXXXXXXXXXXXXXXXXXXXXXIDKSVTVDEDPDHPYRRPDPYDLSEHDTPRTFAIVIKFLYCEEIRFNYLTFDELVSLATTAHRWHLTDLYHATFAYVMDQDLLAGGLGIRTFLPLVAHEETPESFRRYFCIAVGHHFDVLFPRLRAVKEANPS-----STPMLWKTIFKQKMMSHVLHCVSLYSPGLYDEYLLDVILRYYERQSDASDDQLLGMLSQLSWDDIDVSGVFGSEGVSKFWSPRAIRLAALASY-APQTAALEVRIPWNIPLQRLLKQQVWSFQTEHVPCGPYVCYLHVRKGNGREVSLFVHIWNRENKPLKDDARHEIVRVKCRATEINCLCDSSKQWSDSSHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRHAHGENCGLAITTVLQFVNPVRQFEGPARRSAPRTLSPGRLQTPIQKKRS--GSRMKLRESR 588
            LPSPTK   P  PPST VGNW+L +HSFAP+R+YF+++CA LSRRR+ D+LM FRFP       + VAVHYSRLA  GGP+A L+     KK E    DV MG    +       +D +  +D                        +D   ++   PD P R+  P  LS+ DTPR F I++KFLYCEE++FNYLTF E+V LA  AHRW LTDLY+ATFAYVMDQ+LLA GLGIRTF+PLV+H ETPE+FRRYFCIAVGHHFDVL+PRL+A+     +     S P LW  I  Q M+SHV+HC+ LYS   YD+YLLDV+LRYYE +  + D++L G+LSQL+WD+I++S  F S+G SK WS RAIR+AALAS+ APQT ALEVRIPWNIPLQ+LLK+  WSFQTEHV CGPYVCYLHVRKG G EVSLFVHIW R+ KP+  DARHE VRVKCRATE NC CDS +QWS++SHGFLENL FEGKLE YPGLGWSQFLE KR++EWR +HGE CGLAITTVLQF+ P +QFEGPARRS  R  SPGR+ + IQKK S   +RMKLRESR
Sbjct:   10 LPSPTKISLPPMPPSTLVGNWILHEHSFAPQREYFMSFCAQLSRRRVVDHLMSFRFP---QEDIEPVAVHYSRLALAGGPMAALLRE---KKEE----DVVMGTPGREKDKENDKSDSSKKEDGKGKPVEKDVSSEKEANEKEADPMLDDEPSLVRTPDSPPRK-SPVLLSDDDTPRVFNIIVKFLYCEEVQFNYLTFQEVVQLAVAAHRWQLTDLYNATFAYVMDQNLLADGLGIRTFIPLVSHAETPEAFRRYFCIAVGHHFDVLYPRLKAISLTESTAPVSLSVPPLWDVIVSQNMLSHVIHCIGLYSEESYDQYLLDVVLRYYEPKKGSMDEELQGLLSQLNWDEIELSETFASDGPSKNWSARAIRMAALASFDAPQTQALEVRIPWNIPLQKLLKENTWSFQTEHVLCGPYVCYLHVRKGTGPEVSLFVHIWYRDGKPIGADARHESVRVKCRATERNCRCDSGRQWSNTSHGFLENLSFEGKLEGYPGLGWSQFLEAKRIEEWRTSHGEGCGLAITTVLQFMRPKKQFEGPARRSL-RAPSPGRVVSAIQKKHSRPSTRMKLRESR 570          
The following BLAST results are available for this feature:
BLAST of Gcaud8469.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IU02_9FLOR0.000e+076.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QK62_CHOCR1.260e-23861.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1692_length_8986_cov_4.234626contigNODE_1692_length_8986_cov_4.234626:4216..5982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8469.t1Gcaud8469.t1Gracilaria caudata M_176_S67 malemRNANODE_1692_length_8986_cov_4.234626 4216..5982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8469.t1 ID=Gcaud8469.t1|Name=Gcaud8469.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=589bp
MTTTTSDAPPLPPTKAKRELVIPSPTKPTTLPSPTKTVWPAPPPSTPVGN
WVLDQHSFAPKRDYFIAYCAGLSRRRITDNLMWFRFPNVTDSKKQRVAVH
YSRLAWVGGPLAELVASSAAKKSEALGNDVAMGDGAADADGAHSDDKDGK
DRDMDDGAAGDTISKPSADTIDKSVTVDEDPDHPYRRPDPYDLSEHDTPR
TFAIVIKFLYCEEIRFNYLTFDELVSLATTAHRWHLTDLYHATFAYVMDQ
DLLAGGLGIRTFLPLVAHEETPESFRRYFCIAVGHHFDVLFPRLRAVKEA
NPSSTPMLWKTIFKQKMMSHVLHCVSLYSPGLYDEYLLDVILRYYERQSD
ASDDQLLGMLSQLSWDDIDVSGVFGSEGVSKFWSPRAIRLAALASYAPQT
AALEVRIPWNIPLQRLLKQQVWSFQTEHVPCGPYVCYLHVRKGNGREVSL
FVHIWNRENKPLKDDARHEIVRVKCRATEINCLCDSSKQWSDSSHGFLEN
LRFEGKLERYPGLGWSQFLEEKRLDEWRHAHGENCGLAITTVLQFVNPVR
QFEGPARRSAPRTLSPGRLQTPIQKKRSGSRMKLRESR*
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