Gcaud8444.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A2V3ILG7_9FLOR (Putative ATP-dependent RNA helicase ddx52 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG7_9FLOR) HSP 1 Score: 241 bits (616), Expect = 6.250e-75 Identity = 123/167 (73.65%), Postives = 143/167 (85.63%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
M D+KRVTVGAS YG SFAVDEAV HI+QRFV VG + EQGKVMAVRNL+R+G++ PVL+FVQ+KERAA LFREL+YDGVHVDAIH+DRT AAR +AV RFR G WVLIATDVL+RGLDFLAV+ VINYD+PSS+A YVH I R RNG+ G A++LFTEED KL+
Sbjct: 259 MNDMKRVTVGASAYGGSFAVDEAVKHIEQRFVFVGGRAEQGKVMAVRNLLRNGVQAPVLLFVQSKERAAQLFRELLYDGVHVDAIHSDRTVAARETAVQRFREGNTWVLIATDVLSRGLDFLAVRTVINYDVPSSAAAYVHRIGRCGRNGRHGVALSLFTEEDLKLI 425
BLAST of Gcaud8444.t1 vs. uniprot
Match: R7QFR3_CHOCR (DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR3_CHOCR) HSP 1 Score: 200 bits (508), Expect = 2.260e-58 Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
+K K++ + YG S AV + I+Q+F+ VG +GEQGKVMAVR L+++G++ P+L+FVQTK+RAA+L+REL+YDGV V+AIHADR+ AR AV RFR G++WVLIATDVLARGLDFLAV+ V+NYDMPSS++ YVH I RT AVTLFTEED+ L+
Sbjct: 285 LKKQKKIVIDGGAYGGSAAVGGVAARIEQKFMFVGGRGEQGKVMAVRGLLKEGLRAPILLFVQTKDRAAELYRELVYDGVKVEAIHADRSQQARMRAVERFRTGEVWVLIATDVLARGLDFLAVESVVNYDMPSSASAYVHRIGRTXXXXXXXTAVTLFTEEDRVLL 451
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A8C5SKF0_LATLA (RNA helicase n=3 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5SKF0_LATLA) HSP 1 Score: 164 bits (416), Expect = 3.330e-46 Identity = 84/149 (56.38%), Postives = 108/149 (72.48%), Query Frame = 0
Query: 19 AVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
A + AV +DQ + VG E GK++A+RNL++ G PPVLVFVQ+ ERA +LF EL+Y+G++VD IHADRT R + V FRAGKIWVLI T +LARG+DF V MVIN+D PSS+ Y+H I RT R G +G A+T FTE+DK L+
Sbjct: 197 ARNAAVETVDQELIFVGS--ETGKLLAMRNLVKKGFTPPVLVFVQSIERAKELFHELVYEGINVDVIHADRTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINFDFPSSAVEYIHRIGRTGRAGHTGKAITFFTEDDKPLL 343
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A833ZKX7_9CHIR (DExD-box helicase 52 n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A833ZKX7_9CHIR) HSP 1 Score: 162 bits (409), Expect = 3.930e-46 Identity = 88/167 (52.69%), Postives = 113/167 (67.66%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
+ +V V++GA + AV ++Q + VG E GK++A+R LI+ G PPVLVFVQ+ ERA +LF ELIY+G++VD IHADRT R + V FRAGKIWVLI T +LARG+DF V +VINYD P+SS Y+H I RT R G G AVT FTE+DK L+
Sbjct: 78 LDNVITVSIGAR--------NSAVETVEQELLFVGS--ETGKLLAMRELIKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQEQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLL 234
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A7S3A9B4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9B4_9RHOD) HSP 1 Score: 167 bits (422), Expect = 7.740e-46 Identity = 82/167 (49.10%), Postives = 117/167 (70.06%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
MK ++ VG YG A +A S + QRF+ +GE GKV A R L+ +G+ PP LVFVQ+++RA+ LF+EL++DGV++DAIHA+RTAA R++AV FR+G++W+LIATD++ARG+DF + V+NYD+P+S YVH I R A+T FTE+DK L+
Sbjct: 304 MKTPVKIIVGGQSYGGGTAAVDA-STVKQRFMFADGQGEAGKVAAFRRLLTEGLMPPTLVFVQSQDRASQLFKELVFDGVNIDAIHANRTAAQRSTAVENFRSGRVWILIATDLMARGIDFRTINTVVNYDLPASPIAYVHRIGRXXXXXXXXQAITFFTEDDKPLL 469
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A250XAM3_9CHLO (RNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAM3_9CHLO) HSP 1 Score: 166 bits (421), Expect = 7.850e-46 Identity = 86/158 (54.43%), Postives = 115/158 (72.78%), Query Frame = 0
Query: 6 RVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEED 163
RVTVG + A S ++QR + VG E GK+MA+R LI++G+KPP LVFV +K+RA L REL+YDGVHVD+IH++++AAARA+AV FR G+ W+LIATD++ RG+DF+ V+ V+NYD P S+A Y+H I RT R + G AVT FTEED
Sbjct: 327 RVTVGVR--------NSAASSVNQRLLFVGR--EAGKLMALRQLIKEGVKPPTLVFVGSKDRAKSLHRELMYDGVHVDSIHSEQSAAARAAAVDNFRLGRTWILIATDLIGRGMDFVGVKTVVNYDFPHSTADYIHRIGRTGRADQQGEAVTFFTEED 474
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A8C0HK14_CHEAB (DExD-box helicase 52 n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0HK14_CHEAB) HSP 1 Score: 160 bits (405), Expect = 1.960e-45 Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 19 AVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
A + A +DQ + VG E GK++A+R+L++ G PPVLVFVQ+ ERA +LF ELIY+G++VD IHAD+T R + V FRAGKIWVLI T +LARG+DF V MVINYD P+S+ Y+H I RT R G +G AVT FTE+DK L+
Sbjct: 144 ARNAAAETVDQELLFVGS--ETGKLLAMRDLVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINYDFPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLL 290
BLAST of Gcaud8444.t1 vs. uniprot
Match: UPI0005D02283 (probable ATP-dependent RNA helicase DDX52 isoform X2 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI0005D02283) HSP 1 Score: 161 bits (407), Expect = 2.780e-45 Identity = 86/167 (51.50%), Postives = 113/167 (67.66%), Query Frame = 0
Query: 1 MKDVKRVTVGASGYGVSFAVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
+ +V V++GA + AV ++Q + VG E GK++AVR L++ G PPVLVFVQ+ ERA +LF ELIY+G++VD IHA+RT R + V FRAGKIWVLI T +LARG+DF V +VINYD P+SS Y+H I RT R G G A+T FTE+DK L+
Sbjct: 128 LDNVISVSIGAR--------NSAVETVEQELLFVGS--ETGKLLAVRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLL 284
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A2D4GCY5_MICCO (RNA helicase (Fragment) n=2 Tax=Elapidae TaxID=8602 RepID=A0A2D4GCY5_MICCO) HSP 1 Score: 160 bits (405), Expect = 5.030e-45 Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 19 AVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
A + AV +DQ + VG E GK++A+R+L++ G PP LVFVQ+ ERA +LF EL+Y+G++VD IHADRT R + V FRAGKIWVLI T +LARG+DF V MVIN+D PSS+ Y+H I RT R G +G A+T FTE+DK L+
Sbjct: 206 ARNAAVETVDQELLFVGS--ETGKLLAMRDLVKKGFTPPALVFVQSIERAKELFHELVYEGINVDVIHADRTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINFDFPSSAVEYIHRIGRTGRAGHTGKAITFFTEDDKPLL 352
BLAST of Gcaud8444.t1 vs. uniprot
Match: A0A8C0HHM4_CHEAB (DExD-box helicase 52 n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0HHM4_CHEAB) HSP 1 Score: 160 bits (405), Expect = 1.170e-44 Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 0
Query: 19 AVDEAVSHIDQRFVSVGEKGEQGKVMAVRNLIRDGIKPPVLVFVQTKERAADLFRELIYDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQMVINYDMPSSSAPYVHSIERTERNGKSGNAVTLFTEEDKKLV 167
A + A +DQ + VG E GK++A+R+L++ G PPVLVFVQ+ ERA +LF ELIY+G++VD IHAD+T R + V FRAGKIWVLI T +LARG+DF V MVINYD P+S+ Y+H I RT R G +G AVT FTE+DK L+
Sbjct: 187 ARNAAAETVDQELLFVGS--ETGKLLAMRDLVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINYDFPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLL 333 The following BLAST results are available for this feature:
BLAST of Gcaud8444.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8444.t1 ID=Gcaud8444.t1|Name=Gcaud8444.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=171bpback to top |