Gcaud8424.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud8424.t1 vs. uniprot
Match: A0A2V3IUK7_9FLOR (Glutamate receptor ionotropic, NMDA 2C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUK7_9FLOR) HSP 1 Score: 369 bits (947), Expect = 4.140e-120 Identity = 197/446 (44.17%), Postives = 277/446 (62.11%), Query Frame = 0
Query: 16 AAVEIANALTGTSLRCCVVHEPPIAFLDEKEYVNGGISGVVAEYLREMQALLGWNCSEVTPYQYGSGTTAFNNFIDMMENCAVNGTTRIDDQCQCDIGISGWLPTAGRYDRVDLLPPFAQDGFRVIFDISVSNTSINSLFFLTTFDVASWACIFSIILLFTICKLLDHRFAPFVSQRHPQASDSY----------LSRLFRGI----------------QNKPLLYRFP-RAFLSVFKAMIT-----HMTASLVQEQITSEFRSVEDFRSCRIPPEVVCIPDGGAIDTYWNHSIAAGNECH---KGRSPRRGSLADSYEDAIRGLCRYGILLDSTARLAVNGLYCGRFLLS-DNLLTSGLSLVLPKGSNLTRAMSIATLKITEELSPPSVERYFRNIDKCNVETSSILPLRKLVLFFVLAFSCCGAYILAMILKNMLRRDRSAKRQ 425
A ++++ AL+GT LRCCV+HEPPI +LD Y N GI+G++ +YL EMQALL W CSE PY G GT+ FN FIDMM+NC NG + D C+C+IGI GW +A R +RVDLLPPF DG RV F +S + S + LFF+TTFD+ SW C+F+II+LF + K LD RFAP S P A++S+ +RL I QN+ + F + +F ++ MTA+LVQE + S+++SVED ++CRI PE VC+P G A+ T+WN +IA G +CH KG++ RGS ++ + G C++G++LDST + A++G YCG+ L S + + T GLS++LPK SNLT+AM +ATLK+ E S PS+++YF+ + KC T S+L KL L FV A C I + + + RR S K++
Sbjct: 22 AGIQLSKALSGTELRCCVIHEPPIVYLDPNTYSNNGINGIITKYLTEMQALLDWQCSEFIPYVEGDGTS-FNRFIDMMDNCTQNGAIKDDPACRCEIGIGGWFNSADRDERVDLLPPFVYDGIRVTFHVSNTRRSGSKLFFVTTFDLRSWLCLFAIIILFALAKFLDERFAPIPSADEPNAANSWGRCLHFLRTNWNRLITSIRSTTLRIVLQSDHDIVQNQHGAHNFNLNLIIGIFGLLVVLSYEASMTATLVQETVVSDYQSVEDLKTCRIKPEDVCVPGGSAVLTFWNDAIAYG-DCHRESKGKNYFRGSFEETLDAVKNGTCKFGLVLDSTIQEAIHGKYCGQLLSSGEPIYTGGLSMILPKNSNLTKAMRLATLKLRNEASAPSLQQYFQTMSKCAPITGSVLTFEKLQLLFVFAIVACLGCISIKMWQRVWRRPNSPKKE 465
BLAST of Gcaud8424.t1 vs. uniprot
Match: A0A2V3IME4_9FLOR (Glutamate receptor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME4_9FLOR) HSP 1 Score: 357 bits (915), Expect = 4.140e-115 Identity = 197/478 (41.21%), Postives = 281/478 (58.79%), Query Frame = 0
Query: 19 EIANALTGTSLRCCVVHEPPIAFLDEKEYVNGGISGVVAEYLREMQALLGWNCSEVTPYQYGSGTTAFNNFIDMMENCAVNGTTRIDDQCQCDIGISGWLPTAGRYDRVDLLPPFAQDGFRVIFDISVSNTSINSLFFLTTFDVASWACIFSIILLFTICKLLDHRFAPFVSQRHPQASDSYLSRLFRGIQNKPLLYRFPRAFLSVFKAMI-----------------------------------THMTASLVQEQITSEFRSVEDFRSCRIPPEVVCIPDGGAIDTYWNHSIAAGNECHKGRSPRRGSLADSYEDAIRGL----CRYGILLDSTARLAVNGLYCGRFLLSDN-LLTSGLSLVLPKGSNLTRAMSIATLKITEELSPPSVERYFRNIDKCNVETSSILPLRKLVLFFVLAFSCCGAYILAMILKNMLRRDRSAKRQSAPKLVEESLSREYTILKLGNLARSLSYLSD 456
+++ AL+G LRCC++ EPPIAF+D++ Y NGG+SG++A+YLREMQ L W+CS V Y G T+FN+F+ MME+C+ NG R D C CDIGISGW R+ RVD LPPF DG+ V+F IS S S +FF+TTFD +W IF ++LLF+ K D +F P S + ++ + R + P LYRF RA S F MI MTASLVQE +++ F+S++DF++CRI P VC+P GGA++ +WN SIA CHK R P A SY++ + C+YG+LL+STA A+N YCG+ L ++ + + GL++VLPK SNLT MS ATLKIT E++ P +E+YF +I KC++ + L RKL LFF +A C GA++L + + N + +++ +R+ K E+S R+ + N + +S SD
Sbjct: 27 DMSGALSGLQLRCCILDEPPIAFIDDRTYANGGVSGIIAQYLREMQGYLNWSCSSVQHYT-GGKQTSFNHFVRMMEDCSENGAVRNDPGCTCDIGISGWFQNHHRFRRVDFLPPFVTDGYEVVFHISNSEVSGRRMFFITTFDRLAWVSIFGLMLLFSAIKFFDRKFCPIDSFEALEETNPRIQRFVHVLMKYPTLYRFRRALQSTFSRMILLPDSDVVENQTANRQWVLNTVISVSGLFLILSYEASMTASLVQETVSAGFQSIQDFQTCRISPAEVCLPGGGALEMFWNTSIAI-EVCHKQRQP---FFASSYDELFHAVDNRTCKYGLLLESTANAAINSKYCGKLLAAEKPIYSGGLAMVLPKNSNLTDVMSYATLKITNEVATPGIEQYFASIPKCSINPETTLNFRKLRLFFGIAL-CTGAFLLLLRIINNVW-NQAIERRVEDK--EQSKLRDIKTMSSSNCSIDISMSSD 495
BLAST of Gcaud8424.t1 vs. uniprot
Match: A0A2V3IMD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD4_9FLOR) HSP 1 Score: 336 bits (861), Expect = 3.510e-106 Identity = 184/437 (42.11%), Postives = 252/437 (57.67%), Query Frame = 0
Query: 22 NALTGTSLRCCVVHEPPIAFLDEKEYVNGGISGVVAEYLREMQALLGWNCSEVTPYQYGSGTTAFNNFIDMMENCAVNGTTRIDDQCQCDIGISGWLPTAGRYDRVDLLPPFAQDGFRVIFDISVSNTSINSLFFLTTFDVASWACIFSIILLFTICKLLDHRFAPFVSQRHPQASDSYLSRLFRGIQNKPLLYR--------------------FPR---AFLSVFKAMIT------------HMTASLVQEQITSEFRSVEDFRSCRIPPEVVCIPDGGAIDTYWNHSIAAGNECHKGRSPRRGSLADSYEDAIRGL----CRYGILLDSTARLAVNGLYCGRFLLSDN-LLTSGLSLVLPKGSNLTRAMSIATLKITEELSPPSVERYFRNIDKCNVETSSILPLRKLVLFFVLAFSCCGAYILAMILKNMLRR 418
L G LRCC+V+EPPIAFL+++ Y N GI G++A YL +MQ L W CS V Y GS TT FNNFI MME C+ NGT + D C+CDIGI GW + R+ RVD LPPF D ++VIF IS S S S FF+TTFD W CIF ++LLF ++ F + + + + + R+ + N P YR F R FL + K ++T MTAS+VQE +TSEF+S +DF++CRI P+ VC+P GG+ DTYW +A CHKGRSP L SYE+ +G+ CR+GILL+ST ++ YCG L + N + T GL++VLPK S T MS+ATLKIT+ + PS+E ++ C+ E ++ LP +KL LFF++AF ++ +++K L R
Sbjct: 30 GVLAGAKLRCCIVYEPPIAFLNDRNYANLGIDGIIANYLNQMQGFLNWTCSSVQRYSDGS-TTGFNNFITMMERCSENGTIKDDPHCKCDIGIGGWFTNSKRFGRVDFLPPFVYDSYQVIFHISDSKVSGRSPFFITTFDSRGWLCIFGLVLLFATIRMFS-AFGDHARYQPLEPTVTPIRRIAHFLYNHPFFYRLRISIQRIFSRMILMPEPEDFSRPNNTFLWILKTVVTICGLFLILAYEASMTASIVQETVTSEFQSGKDFQTCRIDPKDVCLPRGGSFDTYWTEVLAKERPCHKGRSPH---LMTSYEEVFQGVENRTCRFGILLESTVHSTIHRKYCGTILSNGNPIYTGGLAMVLPKDSMHTEVMSLATLKITDAATVPSLEEFYSTTGSCSAELATSLPFQKLQLFFIIAFCTGFLFLTVVVIKWTLNR 461
BLAST of Gcaud8424.t1 vs. uniprot
Match: A0A2V3IMD5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD5_9FLOR) HSP 1 Score: 279 bits (713), Expect = 2.000e-85 Identity = 174/445 (39.10%), Postives = 246/445 (55.28%), Query Frame = 0
Query: 34 VHEPPIAFLDEKEYVNGGISGVVAEYLREMQALLGWNCSEVTPYQYGSGTTAFNNFIDMMENCAVNGTTRID-DQCQCDIGISGWLPTAGRYDRVDLLPPFAQDGFRVIFDISVSNTSINSLFFLTTFDVASWACIFSIILLFTICKLLDHRFAPFVSQRH-PQASDSYLSRLFRGIQNKPLLYRFPRAFLS-VFKAMI----------------------------------THMTASLVQEQITSEFRSVEDFRSCRIPPEVVCIPDGGAIDTYWNHSIAAGNECHKGRSPRRGSLADS-YEDAIRGLCRYGILLDSTARLAVNGLYCGRF-LLSDNLLTSGLSLVLPKGSNLTRAMSIATLKITEELSPPS--VERYFRNIDKCNVETSSILPLRKLVLFFVLAFSCCGAYILAMILKNMLRRDRSAKRQSAPKLVEESLSR 437
+HE PI+F++++++ N GI G V+EY+ E+Q LGW CS VT +Q+ T+ FN FI+ M C N +T + + C CDIGI GW RY +VD LPPF D +RV +S ++ S FFL TFD SW I ++ +FT+ KLLD RFA V++ + P + S + R + P LYR +A S V + M+ MTASLVQE+ITS + S EDFRSC+IPP VC GGA++ +WN +IA N CH G + S + Y+ G C++ I L+S + CG+ LL + L TSGLS+V+PKGSNLT AMS AT+ + LS PS +E + R KC + +S L RKL LFF+LAFS C A + M+L ++ +SA +++ + V+ S+
Sbjct: 1 MHEAPISFINDRKFSNNGIDGAVSEYVSELQGFLGWRCSSVTLFQH-QNTSGFNAFIEQMHECTTNQSTGVSSNSCPCDIGIGGWFQNQFRYGKVDFLPPFVHDRYRVATHVSNTDASGEMPFFLKTFDSLSWITIVALTCIFTLLKLLDSRFA--VAEPYTPLSGVSRIRRCLHFLWKHPRLYRLRKAGQSSVTRLMLQPDNEVVDNGKSTRQWFLNLVIGICALFLVLSFEASMTASLVQEKITSTYESPEDFRSCKIPPSDVCALRGGALEMFWNTNIATSN-CHNGNPIQYLSTYEEIYDGLASGKCKFSICLESVITTQIRTQSCGQLVLLEEPLYTSGLSMVVPKGSNLTEAMSKATMTLL--LSQPSSFLESFLRKWPKCTKKVASTLTFRKLKLFFILAFSVCAAILFVMLLGSLYPVKKSANKRAIGRSVDSKSSK 439
BLAST of Gcaud8424.t1 vs. uniprot
Match: R7Q540_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q540_CHOCR) HSP 1 Score: 117 bits (293), Expect = 6.180e-27 Identity = 69/190 (36.32%), Postives = 107/190 (56.32%), Query Frame = 0
Query: 226 KAMITHMTASLVQEQITSEFRSVEDFRSCRIPPEVVCIPDGGAIDTYWNHSIAAGNECHKGRSPRRGSLADSYEDAIRGLCRYGILLDSTARLAVNGLYCGRFLLS-DNLLTSGLSLVLPKGSNLTRAMSIATLKITEELSPPSVERYFRNIDKCNVETSSILPLRKLVLFFVLAFSCCGAYILAMILKN 414
+A+ +A+LVQ+ ++S +R ++D ++C + P VC+P GGAID +W ++I N CHK + D ++ + C Y + L S+ YCGR L++ + L +GLS VLP+GSN+T +S T+ +T+ P+ ERY R KC E + L + KL FF +AFS C L MIL +
Sbjct: 3 RAISITCSAALVQDTLSSRYRGLQDLKTCNVRPSDVCVPKGGAIDLFWINTIGK-NACHKEKPVYFSRYKDGIDNLLTKKCLYMLTLSSSGNELTQREYCGRLLVTGEPALRTGLSFVLPRGSNMTSHLSEKTVFLTDAGVLPTPERYLRATGKCP-EQNLTLNVEKLRFFFYMAFSACLFIFLEMILDS 190 The following BLAST results are available for this feature:
BLAST of Gcaud8424.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud8424.t1 ID=Gcaud8424.t1|Name=Gcaud8424.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=479bpback to top |