Gcaud8387.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8387.t1
Unique NameGcaud8387.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length426
Homology
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BLAST of Gcaud8387.t1 vs. uniprot
Match: A0A2V3J2T2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2T2_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 7.880e-86
Identity = 196/483 (40.58%), Postives = 262/483 (54.24%), Query Frame = 0 
Query:    1 MSSSSRNSRKVLTTRPTNTPITDIFERLGFRPAYPVSFEAMGQYHDAQPLIEAIHDSFTASSVLREKEVKDYESRTEKNLMLPLALLSQASAVTNSTPSANDLKKQHDEVLISARKRLELLKAQKTVLRELLEEKESNQNRSLSHIAHQQQPQVKEVFSRYRSKIAILRRLVGRDIGSVSLD---------------RIT---------IVNAPEVDSC--PSFLC------------------------------------YLEMTNVSMNTLLRDIRSRTATCVKRKLEDVSEDAIKDLSGEVYAYLLSENLQRQDAYIETMQACIRVYMLQRLRIHCFQVLVDVVCRKRDMLFDSISRIKSSWASSENRFRVESETVASKP---MDLTGLHFG--RLTQSIL----VDEVESSYFSALLRDTSQLAQQLQQNIGARKHWLDSETPGQFDATASGFEGTLASTSSVLEALVRHYETLLKET 412
            MSSSS+  R     + +   +++ F +LG +      +E M +Y DA PL +AI  SFT++S+L EKE  D      +N  LP  LLS+AS    + P + D++  +DE + SA+KRL+ LK Q+++LRELL++K+S    S +    ++  QVKE+ SRYRSKI +LRR   RDIGSV LD               R+           V A +  S   PS L                                     YLEMTN  MN  L D+RSRTAT +KRK+ DVSEDA +DL+GEV A+L+S+NLQ+QDAYI TMQACI+ YM QRLRIHCFQ L   +  KRD L +SIS+IK+  A +E     E  T A +      L  + +   R  Q I+     DE+ESS FS+   D S + Q L+ +IG  K WLD   P QF       E  L+STS V++ALVRHYET+ + T
Sbjct:    1 MSSSSKFHRNPPRAKSSKPSVSETFMKLGIKLPPSKGYEWMAEYPDALPLFDAIRSSFTSASILSEKEADDCARYKLRNPHLPRLLLSEASTAIENAPLSRDVQALYDERITSAQKRLQSLKDQRSILRELLDQKKSKTASSSNRTKIRKPTQVKELSSRYRSKIELLRRFESRDIGSVVLDSDLTRYHEAEYRYIERVADYASEVAREYVEASQKSSVQTPSRLVSVIRSYGKICAQQTGCEVQLARDTAFLTSLTINDGSYLEMTNPVMNARLTDLRSRTATALKRKMADVSEDASRDLNGEVQAFLMSKNLQKQDAYIGTMQACIKAYMDQRLRIHCFQALRQAMSLKRDRLLESISKIKAYSAEAETPAESEPTTKALEVGTGKALLSIIYANQRYAQHIVGNCFEDELESSVFSSAQSDASNIMQHLKDSIGTNKGWLDLGPPAQFSQLMVDMEEVLSSTSPVVDALVRHYETVRRGT 483
The following BLAST results are available for this feature:
BLAST of Gcaud8387.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2T2_9FLOR7.880e-8640.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_406_length_26511_cov_4.568963contigNODE_406_length_26511_cov_4.568963:17349..18812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8387.t1Gcaud8387.t1Gracilaria caudata M_176_S67 malemRNANODE_406_length_26511_cov_4.568963 17349..18812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8387.t1 ID=Gcaud8387.t1|Name=Gcaud8387.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=426bp
MSSSSRNSRKVLTTRPTNTPITDIFERLGFRPAYPVSFEAMGQYHDAQPL
IEAIHDSFTASSVLREKEVKDYESRTEKNLMLPLALLSQASAVTNSTPSA
NDLKKQHDEVLISARKRLELLKAQKTVLRELLEEKESNQNRSLSHIAHQQ
QPQVKEVFSRYRSKIAILRRLVGRDIGSVSLDRITIVNAPEVDSCPSFLC
YLEMTNVSMNTLLRDIRSRTATCVKRKLEDVSEDAIKDLSGEVYAYLLSE
NLQRQDAYIETMQACIRVYMLQRLRIHCFQVLVDVVCRKRDMLFDSISRI
KSSWASSENRFRVESETVASKPMDLTGLHFGRLTQSILVDEVESSYFSAL
LRDTSQLAQQLQQNIGARKHWLDSETPGQFDATASGFEGTLASTSSVLEA
LVRHYETLLKETTLTNGSSSKSEVQ*
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