Gcaud7854.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7854.t1
Unique NameGcaud7854.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length231
Homology
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BLAST of Gcaud7854.t1 vs. uniprot
Match: A0A2V3IEJ9_9FLOR (Tonsoku-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ9_9FLOR)

HSP 1 Score: 345 bits (885), Expect = 1.180e-109
Identity = 183/230 (79.57%), Postives = 200/230 (86.96%), Query Frame = 0 
Query:    1 MQRYNIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRREKAACKRLVDSNPDNLQYRLDLAIAYHRCGDVMLKLDRLVDAHENLISDKADVVRAAHKQHRHALQIARAIDSAPASLERHAASAAIAHSALALAMETKRVSAFAHAAQCCIRAARLIDCIDPDTSGTFPVDSNGMTHGLAVNFAIALSGMGEKKKAKTMLHSVVLNAKRVNDMPNFVRA 230
            MQRY+IAQLQRQL+NLEDHNDSEAQKLYNNLGLA+LQARRYRHALNAHRREKAACKRLV++NP NL +RLDLAIAY RCGDV+LKLDRL+DA  NLI+DKADV+RAAH QHRHAL+IAR IDS  A +ER AASAA+A SALALA+ETK + AF HAAQCCIRAARLIDCI  +       D N MTHGLAVNFAIALSGMGE KKA TMLH+V LNAKRVNDM NFVRA
Sbjct:    1 MQRYDIAQLQRQLDNLEDHNDSEAQKLYNNLGLAHLQARRYRHALNAHRREKAACKRLVNANPHNLNHRLDLAIAYRRCGDVILKLDRLIDADRNLITDKADVIRAAHVQHRHALKIARVIDSPYARVERQAASAALAQSALALALETKSIPAFRHAAQCCIRAARLIDCIRNEDIRVVDPDKNDMTHGLAVNFAIALSGMGEMKKANTMLHAVALNAKRVNDMQNFVRA 230
The following BLAST results are available for this feature:
BLAST of Gcaud7854.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEJ9_9FLOR1.180e-10979.57Tonsoku-like protein n=1 Tax=Gracilariopsis chorda... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 20..224
e-value: 1.3E-8
score: 36.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 21..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_354_length_28917_cov_4.522861contigNODE_354_length_28917_cov_4.522861:2..692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7854.t1Gcaud7854.t1Gracilaria caudata M_176_S67 malemRNANODE_354_length_28917_cov_4.522861 2..692 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7854.t1 ID=Gcaud7854.t1|Name=Gcaud7854.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=231bp
MQRYNIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRR
EKAACKRLVDSNPDNLQYRLDLAIAYHRCGDVMLKLDRLVDAHENLISDK
ADVVRAAHKQHRHALQIARAIDSAPASLERHAASAAIAHSALALAMETKR
VSAFAHAAQCCIRAARLIDCIDPDTSGTFPVDSNGMTHGLAVNFAIALSG
MGEKKKAKTMLHSVVLNAKRVNDMPNFVRAX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf