Gcaud7843.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7843.t1
Unique NameGcaud7843.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length339
Homology
BLAST of Gcaud7843.t1 vs. uniprot
Match: A0A2V3IZ63_9FLOR (ATP synthase subunit O, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ63_9FLOR)

HSP 1 Score: 333 bits (853), Expect = 6.930e-112
Identity = 175/209 (83.73%), Postives = 188/209 (89.95%), Query Frame = 0
Query:  130 VPRAGNSFWLRTFSAEASGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            V RA N  W R+FSAEA+  +QLPKAVDTAGRYA+ALYNAAKK+NSLDAVI DV T+Q MV  N   +EFLINPSLPR AKVEAITEIV +SGFSDTFSKFLMVM+ENGRTSEASK L +FQ IIGA+KGEVVVKVT+TMPLSEWELALLKKKIKQRFFA KPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVI+QAV
Sbjct:    9 VSRASNVLWRRSFSAEAAEADQLPKAVDTAGRYAHALYNAAKKTNSLDAVINDVDTLQAMVTTNEDFNEFLINPSLPRIAKVEAITEIVDRSGFSDTFSKFLMVMAENGRTSEASKTLTAFQGIIGAIKGEVVVKVTSTMPLSEWELALLKKKIKQRFFADKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVISQAV 217          
BLAST of Gcaud7843.t1 vs. uniprot
Match: R7QQS6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQS6_CHOCR)

HSP 1 Score: 273 bits (698), Expect = 2.320e-88
Identity = 143/196 (72.96%), Postives = 167/196 (85.20%), Query Frame = 0
Query:  143 SAEASGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            +A A+ VE +P+AVDTAGRYA ALYNAA+K+ SLDAVI DV+ MQ+M  +N TL  FL NP+LPRTAK E +++IV+K+ FSD FS F +VM+ENGRT E +K L SFQDII ALKGEVVVKVTTTMPLS+WELALLKK+IK RFFA KP+AELTVETAID+ LLGGLTI VGDRFMDLSTRTELRKLQEVI ++V
Sbjct:   23 TAVAAEVE-IPRAVDTAGRYATALYNAARKTGSLDAVIGDVSRMQNMTTENATLERFLANPTLPRTAKTEVVSDIVRKAAFSDIFSHFFIVMAENGRTGETTKTLQSFQDIIAALKGEVVVKVTTTMPLSDWELALLKKEIKARFFADKPNAELTVETAIDQSLLGGLTIMVGDRFMDLSTRTELRKLQEVILKSV 217          
BLAST of Gcaud7843.t1 vs. uniprot
Match: UPI001E1DB219 (ATP synthase subunit O, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB219)

HSP 1 Score: 189 bits (480), Expect = 4.540e-56
Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 0
Query:  179 VITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPD--AELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVI 334
            V  DVT MQ M + + +  +FL NP+L R+AKV  ++EIVKK+GFS TFS FL+V++ENGR+ E  K L++F  ++ + KGEVVVKVTTT+PL+ WELALLKK IK+RF+   PD  A+L VETAIDE LLGGLTIQ+GDRFMDLS RTELRKL EVI
Sbjct:   18 VSADVTQMQSMQSSSASFDDFLRNPTLARSAKVNILSEIVKKAGFSRTFSDFLLVVAENGRSGEIEKILSTFDGMVASTKGEVVVKVTTTLPLTNWELALLKKNIKERFY---PDSVADLIVETAIDESLLGGLTIQIGDRFMDLSARTELRKLTEVI 172          
BLAST of Gcaud7843.t1 vs. uniprot
Match: M1UPN5_CYAM1 (Mitochondrial F1FO ATP synthase subunit ATP5 n=2 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UPN5_CYAM1)

HSP 1 Score: 145 bits (367), Expect = 1.560e-38
Identity = 79/214 (36.92%), Postives = 134/214 (62.62%), Query Frame = 0
Query:  134 GNSFWLR-------TFSAEA-SGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLM-VMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            G ++W R         SA+A S V    +    AGRYA +L   A K+N L+ V  DV  ++ ++ +N  + EFL +P+  + AK  A+ +++  +G    F + L+ ++++N R S  S+ L SFQ +I A +G     VT+ +PL+EW+LALL++++++RF+   PDA + + T ID +L+GG T+Q+GD+FMDLS ++E+R+L++ +AQ V
Sbjct:   13 GAAYWRRLATSAGSAASADANSAVAATKQLTGVAGRYAGSLLRVAMKANQLNEVHRDVDALERLLRENPRIEEFLRDPTRSQVAKQRALEKLLDAAGVQTVFVRRLLDLLADNRRLSHVSQVLHSFQSVIAAQRGSTQAVVTSAVPLTEWQLALLRQRLQRRFYPDMPDARVDLITRIDRDLIGGFTVQLGDKFMDLSLKSEVRRLRDELAQQV 226          
BLAST of Gcaud7843.t1 vs. uniprot
Match: A0A2V3IZ73_9FLOR (F-box/LRR-repeat protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ73_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 3.030e-37
Identity = 81/138 (58.70%), Postives = 99/138 (71.74%), Query Frame = 0
Query:    1 MAHTLASEKALALRESEELHISIIDPDQEEQILRKREELTHLRGGRGILQNLGSTSPTLRKRNRSTTRLPEPPSRRLRTGLQSKVDLHAADKKSSPLDMLTDDLLIEIFKHLPRFPHLLRIRQVCLSQRVPRAGNSFW 138
            MAHTLA++K + LR++E++HISIIDPDQEE+ILRKRE+L   R   GILQ+   T    RKRNRS+  L EP SRR RTGL +K  + +  KK +P+DMLTDDL+I+IFKHLPR PHLLRIRQVC   R        W
Sbjct:    1 MAHTLANDKGITLRDAEDVHISIIDPDQEEEILRKREQLLRSRADLGILQHFTDTPAAQRKRNRSSW-LAEPASRRQRTGLHTKAAVRS--KKPNPMDMLTDDLMIQIFKHLPRLPHLLRIRQVCRRWRDLSCSPRLW 135          
BLAST of Gcaud7843.t1 vs. uniprot
Match: UPI001E1DEE68 (ATP synthase subunit O, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEE68)

HSP 1 Score: 129 bits (324), Expect = 4.220e-32
Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 0
Query:  160 GRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            GRYA ALY+AA K N LDAV  ++ + QD++ K   +SEFL NPS  R AK  A+  + +   +SD  S FL +++ENGR    +  LA+F  ++ A +GE++  VTT  PL   E   LK  ++   FA K    L +E  +D  ++GG+ + +GD+F+D+ST ++++K   V+ +AV
Sbjct:   60 GRYATALYSAATKQNKLDAVEKEMNSFQDLMRKEKKISEFLSNPSYQRQAKKAAMVRLAQSQKYSDITSNFLCLLAENGRLPRTTPVLAAFNKLMSANRGEILCSVTTASPLGAAEEKELKAALQG--FAKKGQT-LQLEMLVDPSIMGGMVVYIGDKFIDMSTASKMKKYTNVLKEAV 235          
BLAST of Gcaud7843.t1 vs. uniprot
Match: UPI001E270832 (ATP synthase subunit O, mitochondrial n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E270832)

HSP 1 Score: 127 bits (319), Expect = 1.150e-31
Identity = 73/200 (36.50%), Postives = 115/200 (57.50%), Query Frame = 0
Query:  139 LRTFSAEASGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            L T SA A  V+   +     GRYA ALY+AA KS SLD V  ++T  Q  +  +  L EFLINP+L R  KVEA+  +  K+  S T    L +M+ENGR  +    + +F+ ++ A +GEV  +V T  PL + +   L+  +K +F  G     LT  + +D  L+GG+ + +GD+++D+S  ++++K  E+I+ AV
Sbjct:   13 LSTSSAAAQLVKAPVQVFGLEGRYASALYSAASKSKSLDTVEKELTNFQQSIKTDAKLKEFLINPTLKRNLKVEALKHLTSKTSMSPTTGNLLGLMAENGRLGKLESVINAFKIMMAAHRGEVTCEVITAKPLDQAQKQSLEAALK-KFLKGSETLHLT--SKVDPSLIGGMVVSIGDKYVDMSIASKVKKYTELISAAV 209          
BLAST of Gcaud7843.t1 vs. uniprot
Match: A0A6J1MUH2_BICAN (ATP synthase subunit O, mitochondrial n=5 Tax=Satyrini TaxID=127320 RepID=A0A6J1MUH2_BICAN)

HSP 1 Score: 127 bits (318), Expect = 1.610e-31
Identity = 71/200 (35.50%), Postives = 117/200 (58.50%), Query Frame = 0
Query:  139 LRTFSAEASGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            L T SA A  V+   +     GRYA ALY+A  KS SLDAV  ++T  Q  +  +  L EF+INP+L R  KV+A+  +  K+  S T +  L +M+ENGR  +    + +F+ ++ A +GEV  +V T  PL + +   L+  +K +F  G    +LT +  +D  L+GG+ + +GD+++D+S  ++++K  E+I+ AV
Sbjct:   13 LSTSSAAAQLVKPPVQVFGLEGRYASALYSAGTKSKSLDAVEKELTQFQQSIKTDAKLKEFIINPTLKRNLKVDALKHLASKTSLSPTTANLLGIMAENGRLDKLEAVINAFKIMMAAHRGEVTCEVITAKPLDQTQKQNLEAALK-KFLKGNETLQLTAK--VDPSLIGGMVVSIGDKYVDMSVASKVKKYTELISAAV 209          
BLAST of Gcaud7843.t1 vs. uniprot
Match: A0A212FJK0_DANPL (ATP synthase subunit O, mitochondrial n=2 Tax=Danaus TaxID=13036 RepID=A0A212FJK0_DANPL)

HSP 1 Score: 126 bits (317), Expect = 2.260e-31
Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 0
Query:  139 LRTFSAEASGVEQLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV 338
            L T SA A  V+   +     GRYA ALY+AA KS SLDAV  +++  Q  +  +  + EF+INP+L R  KV+A+ ++  K+  S T S  L +M+ENGR  +    + +F+ ++ A +GEV  +V T  PL   +   L+  +K +F  G    +LT +  +D  L+GG+ + +GD+F+D+S  ++++K  E+I+ AV
Sbjct:   13 LSTSSAAAQLVKPPVQVFGLEGRYASALYSAASKSKSLDAVEKELSQFQKSIKSDPKVKEFIINPTLKRNLKVDALKQVAVKTNLSATTSNLLGLMAENGRLDKLEAVINAFKMMMAAHRGEVTCEVITAKPLDPAQKQSLEAALK-KFLKGNETLQLTAK--VDPSLIGGMVVSIGDKFVDMSVASKVKKYTELISNAV 209          
BLAST of Gcaud7843.t1 vs. uniprot
Match: M2XBA6_GALSU (F-type H+-transporting ATPase subunit delta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XBA6_GALSU)

HSP 1 Score: 125 bits (315), Expect = 6.250e-31
Identity = 60/172 (34.88%), Postives = 105/172 (61.05%), Query Frame = 0
Query:  166 LYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFLINPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASFQDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVETAIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQA 337
            L + A+K  +LD +  DV   + + + +     FL +P++P+  K + I E++K+  FSD F +F+ V+ EN RT + S  + +  +++   KG+ V  + T  PL+EW++A L+K++ +RFF   P+ EL +    D  L+ G T+QVG+RF+DLS R E+R ++E + Q+
Sbjct:   51 LLSLARKEGALDKITKDVKQFRTLESDHPDFKRFLQDPTIPQGEKQQFIQELLKREQFSDLFYRFVGVIEENRRTEDLSSVIETLDNMLRGDKGQRVAYLVTASPLTEWQIAFLRKRLIRRFFPDDPETELEIHVKKDPSLISGFTVQVGERFIDLSYRKEMRDVKEALRQS 222          
The following BLAST results are available for this feature:
BLAST of Gcaud7843.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ63_9FLOR6.930e-11283.73ATP synthase subunit O, mitochondrial n=1 Tax=Grac... [more]
R7QQS6_CHOCR2.320e-8872.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1DB2194.540e-5663.29ATP synthase subunit O, mitochondrial-like n=1 Tax... [more]
M1UPN5_CYAM11.560e-3836.92Mitochondrial F1FO ATP synthase subunit ATP5 n=2 T... [more]
A0A2V3IZ73_9FLOR3.030e-3758.70F-box/LRR-repeat protein 7 n=1 Tax=Gracilariopsis ... [more]
UPI001E1DEE684.220e-3239.11ATP synthase subunit O, mitochondrial-like n=1 Tax... [more]
UPI001E2708321.150e-3136.50ATP synthase subunit O, mitochondrial n=1 Tax=Meli... [more]
A0A6J1MUH2_BICAN1.610e-3135.50ATP synthase subunit O, mitochondrial n=5 Tax=Saty... [more]
A0A212FJK0_DANPL2.260e-3136.00ATP synthase subunit O, mitochondrial n=2 Tax=Dana... [more]
M2XBA6_GALSU6.250e-3134.88F-type H+-transporting ATPase subunit delta n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000711ATPase, OSCP/delta subunitPRINTSPR00125ATPASEDELTAcoord: 309..327
score: 34.08
coord: 158..177
score: 40.88
coord: 294..309
score: 32.81
coord: 228..239
score: 34.38
IPR000711ATPase, OSCP/delta subunitPFAMPF00213OSCPcoord: 159..332
e-value: 5.4E-40
score: 137.3
IPR000711ATPase, OSCP/delta subunitTIGRFAMTIGR01145TIGR01145coord: 159..333
e-value: 1.1E-27
score: 95.3
IPR000711ATPase, OSCP/delta subunitPANTHERPTHR11910ATP SYNTHASE DELTA CHAINcoord: 149..334
IPR000711ATPase, OSCP/delta subunitHAMAPMF_01416ATP_synth_delta_bactcoord: 154..336
score: 16.791302
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyGENE3D1.10.520.20coord: 158..251
e-value: 2.1E-19
score: 71.9
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilySUPERFAMILY47928N-terminal domain of the delta subunit of the F1F0-ATP synthasecoord: 158..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..74
NoneNo IPR availablePANTHERPTHR11910:SF1ATP SYNTHASE SUBUNIT O, MITOCHONDRIALcoord: 149..334
IPR020781ATPase, OSCP/delta subunit, conserved sitePROSITEPS00389ATPASE_DELTAcoord: 296..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_647_length_20364_cov_4.929216contigNODE_647_length_20364_cov_4.929216:8346..11917 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7843.t1Gcaud7843.t1Gracilaria caudata M_176_S67 malemRNANODE_647_length_20364_cov_4.929216 8346..11917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7843.t1 ID=Gcaud7843.t1|Name=Gcaud7843.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=339bp
MAHTLASEKALALRESEELHISIIDPDQEEQILRKREELTHLRGGRGILQ
NLGSTSPTLRKRNRSTTRLPEPPSRRLRTGLQSKVDLHAADKKSSPLDML
TDDLLIEIFKHLPRFPHLLRIRQVCLSQRVPRAGNSFWLRTFSAEASGVE
QLPKAVDTAGRYAYALYNAAKKSNSLDAVITDVTTMQDMVAKNTTLSEFL
INPSLPRTAKVEAITEIVKKSGFSDTFSKFLMVMSENGRTSEASKALASF
QDIIGALKGEVVVKVTTTMPLSEWELALLKKKIKQRFFAGKPDAELTVET
AIDEELLGGLTIQVGDRFMDLSTRTELRKLQEVIAQAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000711ATPase_OSCP/dsu
IPR026015ATP_synth_OSCP/delta_N_sf
IPR020781ATPase_OSCP/d_CS