Gcaud7750.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7750.t1
Unique NameGcaud7750.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length768
Homology
BLAST of Gcaud7750.t1 vs. uniprot
Match: A0A2V3IVI3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI3_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 1.020e-42
Identity = 233/805 (28.94%), Postives = 348/805 (43.23%), Query Frame = 0
Query:    1 MDEVLSLKPSVAIRRLQTAVRESQGTSRASYAAKNRPEWWKENVSVTLPDGSHSKTGAFVSHSKCAWKLKQVQAALVLFYRHW--EENGSSGSEECSEWDSPPPRKAKRAPVKAESRPCRTRKKTNPAPVENAQLPQKFXXXXXXXXXXXXXXXKSVTFKEKHELNVHHTPPRNLR--------RNRSIPESSKNSKQNARTTSHRNEKEELSEMQLAPEVESKQSNPSS-----SSEDQAKTK-PSASQVRRVAPRRLVKKTNVRAAPGASPTGPNSARHTLPLPSRTDASAVPK---ENRRISK--RRSKKQPRKAADVTTKHSPELIAIDSDAPPETSSAANLESTPPGRIRIISRRRSSRLSTTEDLTTEDLTPKRASGVKRRLDHTLSRIRTPLAPLQNNGNVNVVEDVKRRKTAGKKTVAVRTARKSCRKENTESKISFGETSSEKENYCPGHATGTNGEGSGEQLVFSARRSLRLRPSPRASHSGNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETLTKEEKKEQYDLIMSAVATLEREHDNCIAKLEEHRQRLVEDLQKEHGHKRNKLDQQYQMRLMHMSERERSTLVGHMVFELEGDPNNLLVKDVENAADCILNDSTDGPGIG------DGSNNTQMEL-QVPKTPKARSLRQAAVAAATERKRVNRERYEATRP---SVRRSTRKAAQTATARTREILTSAARPKSVASITHEAGAVGNRIQRETEL-------STPVLEAVQSEISRLRGLPNGRERLRALKAQLDGALSEIV 767
            MD V SL     +R LQTAVRE+QG+ RASYA K+RPEWW E   V LPDG+ + TG F+SHSK AW L QV+AALVL+YRH   +E  SS + + S  +S PPR   +AP   ES        +NP+ V  +Q  ++                        H        PR  R        R R IP  ++   +  R     +E E  +   LA  ++  QS+  +     S E Q + K  +  ++ R  PR   +   + A P     G +  R    + +    +  PK   ENR+ SK  +RS +   +    T       +AI ++   + SS  +    PP +     +RR   +   E  TT       +  +KR L  T S  RTPLAPLQ+  N N    +KRRK     +      ++S     + +++  G+   EKEN  P     T+  G     V ++ +        +A   G +                                                   +E++ EQ   IM+ +  LE+     + K+++     V +++ +    ++K  +  +++ MHM + E STLV  MV++ +GD + +LVK  E+AA  I+    +G G        DG  N  +      KTP+ARSLR A   A  E+KR+N ER EATR    +VRRS RKAAQ AT RT+ IL+          +  E  +      R  +        S      +Q+E+ RLR LPNG + L  LKA++D A   ++
Sbjct:    1 MDGVCSLSLRTGVRLLQTAVRETQGSKRASYAVKDRPEWWNEKHQVELPDGTSAVTGRFISHSKSAWTLPQVKAALVLYYRHLNGDEEPSSATHQQSRHESVPPRS--QAPKTEES------VSSNPSRVTRSQKKEEALIEDSHGQ-----------IPSTHATATEDASPRATRARLKKPVNRTRPIPRHARGKSKARRIVISDSEAESSA---LASPIKRHQSSSHTQHSVQSFETQKRNKCTNPGRINR-RPRAKGENEEIEAQPEEE-QGRSERRSAQMVKAPAAKTCSPKKRNENRKPSKTIKRSVRVRPRGPSKTAPLPQTNLAIKAEV--QESSTRDASPGPPKK----EKRRHETVPKAEKQTTAT----NSLRLKRSLISTHSECRTPLAPLQDIANENANRCLKRRKLDRADSFDKSKQKRSKNGGLSGAEVEEGDVIVEKENERPS----TDDTGVDVSPVATSCK--------KAKQGGESMAQERLEDGIALEASNEVVVDVDNGVYNGSEDEEDKAAM---------AAAEEKRNEQ---IMALIEELEKARGEALQKMDDKCTSQVRNVETQLEAYQSKQRRTGKVQRMHMRKEELSTLVRDMVYKYKGDTDQILVKGFESAAQEIVQ-RFNGAGASEIERGNDGHANGGVRFADEAKTPRARSLRSAVAMATAEQKRLNYERCEATRNVRGTVRRSQRKAAQAATERTKRILSRYRGRTEGGMVAQEQDSDVEGTGRSEDANANGGDGSEEAFTTIQAEMCRLRALPNGAQALAVLKAKVDDAFRRLM 746          
The following BLAST results are available for this feature:
BLAST of Gcaud7750.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVI3_9FLOR1.020e-4228.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 525..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1750_length_8626_cov_4.465026contigNODE_1750_length_8626_cov_4.465026:2808..5111 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7750.t1Gcaud7750.t1Gracilaria caudata M_176_S67 malemRNANODE_1750_length_8626_cov_4.465026 2808..5111 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7750.t1 ID=Gcaud7750.t1|Name=Gcaud7750.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=768bp
MDEVLSLKPSVAIRRLQTAVRESQGTSRASYAAKNRPEWWKENVSVTLPD
GSHSKTGAFVSHSKCAWKLKQVQAALVLFYRHWEENGSSGSEECSEWDSP
PPRKAKRAPVKAESRPCRTRKKTNPAPVENAQLPQKFTSEPLKGASKPCE
NKKSVTFKEKHELNVHHTPPRNLRRNRSIPESSKNSKQNARTTSHRNEKE
ELSEMQLAPEVESKQSNPSSSSEDQAKTKPSASQVRRVAPRRLVKKTNVR
AAPGASPTGPNSARHTLPLPSRTDASAVPKENRRISKRRSKKQPRKAADV
TTKHSPELIAIDSDAPPETSSAANLESTPPGRIRIISRRRSSRLSTTEDL
TTEDLTPKRASGVKRRLDHTLSRIRTPLAPLQNNGNVNVVEDVKRRKTAG
KKTVAVRTARKSCRKENTESKISFGETSSEKENYCPGHATGTNGEGSGEQ
LVFSARRSLRLRPSPRASHSGNASNRENIENVSTASARGNDDEDFDNDTG
NEGDYNDSNNHDCEDVDENEETLTKEEKKEQYDLIMSAVATLEREHDNCI
AKLEEHRQRLVEDLQKEHGHKRNKLDQQYQMRLMHMSERERSTLVGHMVF
ELEGDPNNLLVKDVENAADCILNDSTDGPGIGDGSNNTQMELQVPKTPKA
RSLRQAAVAAATERKRVNRERYEATRPSVRRSTRKAAQTATARTREILTS
AARPKSVASITHEAGAVGNRIQRETELSTPVLEAVQSEISRLRGLPNGRE
RLRALKAQLDGALSEIV*
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