Gcaud7626.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7626.t1
Unique Name	Gcaud7626.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	171

Homology

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BLAST of Gcaud7626.t1 vs. uniprot
Match: A0A2V3J2V1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2V1_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 5.320e-25
Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = 0

Query:   49 IQKRRRSRAPKVFTIPLDNRPEEVVERVCETVVGEMVQIFWTEINCWVDGEVVAYTNRMSETAMAGMHCIQYEDGIKEWKKIEKFRVVKQ 138
            I+KR+     KV TI +  R E + ER+  T+VGE +Q+FWTEIN WVD +V+ Y + M+ T  AGMHC++Y DG+KEW+ + +FRVV +
Sbjct:   42 IRKRKSVNKSKVHTITICERDENIAERIKSTIVGESIQVFWTEINAWVDCKVIVYESSMAGTTTAGMHCVEYADGMKEWRTLREFRVVSE 131

The following BLAST results are available for this feature:

BLAST of Gcaud7626.t1 vs. uniprot

BLAST of Gcaud7626.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2V1_9FLOR	5.320e-25	48.89	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_534_length_22701_cov_4.725210	contig	NODE_534_length_22701_cov_4.725210:12150..12744 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7626.t1	Gcaud7626.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_534_length_22701_cov_4.725210 12150..12744 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7626.t1 ID=Gcaud7626.t1|Name=Gcaud7626.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=171bp
MGQLFSSSSNLAENTAQKEARPRRYECHETIKGSTWTEEPGTSTRDRMIQ
KRRRSRAPKVFTIPLDNRPEEVVERVCETVVGEMVQIFWTEINCWVDGEV
VAYTNRMSETAMAGMHCIQYEDGIKEWKKIEKFRVVKQHGDWSKDPISSS
SESAELGNRRKATTRVVLED*