Gcaud7571.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7571.t1
Unique NameGcaud7571.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length360
Homology
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A2V3IZ03_9FLOR (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ03_9FLOR)

HSP 1 Score: 410 bits (1054), Expect = 2.250e-140
Identity = 231/327 (70.64%), Postives = 267/327 (81.65%), Query Frame = 0
Query:   36 SRLPLPEGGAPNASRGAVSASRSDPSHIK---SKGKSLSALSLLPLPTPHVLHTLLWLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQDVPLSPSNSV 359
            SRLP  + GA    R +V+ SRSDP+HIK   +K  S S   L PL TPH+ +TLLWLL AA     +A  R    ALEF T YIVEYSLSVDNLFVFLLIFRYFKVP+DAQQTVLRYGILGAM+LRGIMILAGK LID F+W+AI FA LLIYSA KLL +DDDD+DLE+NR+IA SR++ PVA+YY GDKFF+ DG R + TPLMVVL+AIELSDV+FALDSVPAVLGIS DT V+YTSNILAIMGLRSLFFV+SNTI +LRFLKQSL+IVLAFIG+KMIA C G++ G+A SL+VVT TLA+GI+LSLL P++ D  LSPSNSV
Sbjct:    4 SRLPPADNGASALPRPSVTISRSDPTHIKLLKTKSSSGSYWFLPPL-TPHLRNTLLWLLFAASFVPLLALGRSPRHALEFATGYIVEYSLSVDNLFVFLLIFRYFKVPTDAQQTVLRYGILGAMLLRGIMILAGKALIDRFEWLAILFAALLIYSAGKLLFEDDDDSDLENNRVIALSRNLFPVADYYTGDKFFIHDGTRFVATPLMVVLIAIELSDVIFALDSVPAVLGISTDTLVIYTSNILAIMGLRSLFFVLSNTIASLRFLKQSLAIVLAFIGIKMIAACFGHELGIAWSLSVVTFTLALGIVLSLLFPDQPDPALSPSNSV 329          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A1X6PEJ8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ8_PORUM)

HSP 1 Score: 259 bits (663), Expect = 1.260e-79
Identity = 144/276 (52.17%), Postives = 198/276 (71.74%), Query Frame = 0
Query:   83 VLHTLLWLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDD--DDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQ-------DGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQ 349
            +L+TL W+  A +VA  VA   G    LEF  AY+VEYSLSVDNL VFLL+F++F VP   Q  VL++GI+GAM LRG+MI+AG+ L   F+W+++ F  +L+ SA K+L+     DD D+ +N  + F+R +LP ++ Y GD+FF         DG R + TPLM+VL+++E SDVVFALDSVPAVLGIS+ TFV+Y SNI+A++GLRSLFFV+S  IG LRFL+ +L++VLAF+G+KM+AG  GY+ G+  SL V+TV +  G+  SLL PE +
Sbjct:  169 ILYTLCWVAAAGVVAAGVAATLGAERGLEFVAAYVVEYSLSVDNLLVFLLLFQHFHVPRRLQARVLKWGIIGAMSLRGVMIVAGEALTRRFRWVSLVFGGILLVSAAKMLIPGAGGDDEDVANNATVRFARRLLPFSDAYDGDRFFTSGAGGPGGDGPR-LATPLMLVLLSVEFSDVVFALDSVPAVLGISSHTFVIYASNIMAVLGLRSLFFVISEAIGDLRFLQPALAVVLAFVGLKMMAGVAGYEVGILPSLGVITVCVGGGVAASLLFPEGE 443          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A5J4YSR0_PORPP (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSR0_PORPP)

HSP 1 Score: 252 bits (643), Expect = 4.150e-77
Identity = 135/269 (50.19%), Postives = 192/269 (71.38%), Query Frame = 0
Query:   85 HTLLWLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLL----DDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQ 349
             T  W+    L+ + V  +    SAL++ T YI+E SLSVDNLFVFLLIFR+FKVP D+Q+ VL +GI+GA V RG+MI+ G+ L+  F WI++ F+++L+YSA  LL     DDDD   + +N ++ F R V+PVA+ Y G KFFV +  R + TPL++VL+ IELSDV+FA+DSVPAVLG+S+ T VVYTSN+ AI+GLRSL+FV+++ I  +RFLK SLSI+L+F+G+K++    G+     +SL  + + LA G+  S+LLP +Q
Sbjct:  119 RTAFWVGFGLLLGLGVWLIEDHDSALQYWTCYIIEQSLSVDNLFVFLLIFRFFKVPRDSQEVVLYWGIVGACVFRGLMIVLGEALVHRFTWISLIFSVILLYSAFMLLFGADSDDDDPDSMANNSVVTFVRRVVPVADRYHGRKFFVYENGRLVGTPLLLVLLCIELSDVIFAMDSVPAVLGLSDKTLVVYTSNMAAILGLRSLYFVIADAIQNMRFLKHSLSIMLSFVGIKIVLDFFGFHISTLLSLLFILLVLACGVTASMLLPLKQ 387          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A7S0T6N1_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N1_9RHOD)

HSP 1 Score: 249 bits (635), Expect = 4.270e-76
Identity = 139/267 (52.06%), Postives = 188/267 (70.41%), Query Frame = 0
Query:   89 WLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLL--DDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDG---ARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQD 350
            W+  AA V   V    G   A EF TAY+VEYSLSVDNLFVFLL+F+YFKVP DAQ+ VL++G++GA ++R   I  G+ L   F W+++ FA++LI SAVK+ +  D++D+ DL  N I+ FS+S+L  ++ Y GD+F+ +DG   A+ + TPL++ L+ +ELSDVVFALDSVPAVLGIS + FVVY+SN+LAI+GLRSLFFVV + +  LRFL+ SL  VLAF+G+K+     GY+    +SL VV   L+ GI LS  LP   D
Sbjct:  131 WVAVAAAVGAGVYAKMGADRAYEFVTAYVVEYSLSVDNLFVFLLLFQYFKVPRDAQEKVLQWGVIGAGLMRLAFIFVGEELESRFWWVSLIFAVILIASAVKIFVAGDEEDEEDLSQNSIVNFSKSLLSFSDSYDGDRFWTRDGPEAAKAVATPLLLTLICVELSDVVFALDSVPAVLGISKNLFVVYSSNLLAILGLRSLFFVVEDAVANLRFLQPSLGAVLAFVGLKLAGSSFGYNIDTGLSLAVVASILSAGIGLSYALPNDSD 397          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A7S3ABX2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABX2_9RHOD)

HSP 1 Score: 244 bits (622), Expect = 1.480e-75
Identity = 131/241 (54.36%), Postives = 181/241 (75.10%), Query Frame = 0
Query:  110 LEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQD 350
            +E+ T Y+VE SLSVDNLFVFLLIF YF VP +AQ+ VL +GILGAM+ RG+MI  G  L + F+   + FA +L+YSA+KLL++ +++ DL  NRII F++ V+PV+E Y G KF+ ++  + + TPL+VVL++IELSDVVFA DSVPAVLGIS+D FV+YTSN+ AI+GLRSL+FV+++ IGTLRFL+ SL++VL FI +KMI   +G      +SL  V + L+ G+ LS L P  ++
Sbjct:   42 IEYLTGYVVELSLSVDNLFVFLLIFNYFHVPREAQEPVLFWGILGAMIFRGLMIFIGGKLTERFRLAQLGFAAILLYSAIKLLIEGEENEDLSDNRIIKFAKRVVPVSETYHGTKFYFKESEKIVWTPLLVVLLSIELSDVVFAFDSVPAVLGISDDIFVIYTSNVFAIIGLRSLYFVIADAIGTLRFLQPSLALVLGFIALKMIFAVVGLQVNTKLSLGFVLLILSGGVGLSYLYPGAKE 282          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A7S0ZLL3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLL3_9RHOD)

HSP 1 Score: 244 bits (624), Expect = 1.030e-74
Identity = 136/260 (52.31%), Postives = 185/260 (71.15%), Query Frame = 0
Query:   89 WLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDDDDDAD--LEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLP 346
            W++        V  + G  +ALE+ T Y+VE SLSVDNLFVFLLIF +F+VP D Q+T L +GI+GA   RG+M++ G+ L+  F+ + + FA +L+YSA K++++ DDD +  LE N+II F R ++PV + Y G KFFV++    + TPL VVL  IELSDVVFA+DSVPAVLGIS+ TFVVY+SNI AI+GLRS+FFV+S+ I  LRFLK SLSI+LAF+G+K++A    Y+     SL VV + L +G+  SLL P
Sbjct:   97 WVVIGISFGAVVWLMEGLDAALEYWTCYVVEQSLSVDNLFVFLLIFSFFRVPRDLQETALYWGIVGACFFRGLMVVIGEALVHRFKKVNLFFAGVLLYSAYKIMMEGDDDGNDSLEKNKIIQFVRKLVPVTDRYHGKKFFVKENGILLGTPLFVVLACIELSDVVFAMDSVPAVLGISSRTFVVYSSNIAAILGLRSMFFVISDAIAHLRFLKHSLSIMLAFVGLKIVATHFEYELNTLTSLAVVILVLGIGVCASLLFP 356          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A6N6PIW2_9BACT (TerC family protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6PIW2_9BACT)

HSP 1 Score: 232 bits (591), Expect = 1.700e-70
Identity = 122/272 (44.85%), Postives = 179/272 (65.81%), Query Frame = 0
Query:   86 TLLWLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQDVPLSPSN 357
            T+ W+  A L  + + +  G  +ALEFTT Y++EYSLSVDN+FVF ++F YF VP   Q  VL +GILGA++LR  MI+AG VLI  F+WI   F   LI + +K+++  +++   E N ++ + + ++PV   Y GDKFFV++    + TPL VVL+ IE+SDV+FA+DS+PA+  ++ D F+VYTSNI AI+GLRSL+F ++  +     LK  L +VL F+GVKM+ G   Y     VSL V+   LA  I+LSLL P++ +V L  ++
Sbjct:   42 TVAWVSLAMLFNIGLWYFAGAQTALEFTTGYVIEYSLSVDNIFVFAMLFSYFAVPPSYQHRVLFWGILGALILRAAMIVAGTVLITKFEWIIYVFGAFLIVTGIKMIVKQEEELHPERNPVVRWFKKLMPVTSDYRGDKFFVRENGIRMATPLFVVLLLIEVSDVIFAVDSIPAIFAVTKDPFIVYTSNIFAILGLRSLYFALAGVLDKFHLLKIGLGVVLTFVGVKMLLGHTAYKIDTLVSLGVIVGVLATSIVLSLLRPKKAEVHLGHAS 313          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A2V3IQ79_9FLOR (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ79_9FLOR)

HSP 1 Score: 232 bits (592), Expect = 2.610e-70
Identity = 127/257 (49.42%), Postives = 188/257 (73.15%), Query Frame = 0
Query:   96 VAVTVAFVRGWH-----SALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLL-DDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLP 346
            VA+ +A   G++     S +EF TAYI+EY+LSVDNL VFLLIF YF VP   Q  VL +G+ GA+++RG+ I+ G+ L   F+  ++ FA +L++SA KL L D++D+ DL +N I+ F+ SVLPV++ Y+GD+FFV++    + TPL++VL+ +E+SD+VFALDSVPAVLG+S+ T V+Y SN+LA++GLRSL+F+++++I  LRFL+ +L+ VLAFIG KM A    ++  V +SL+VV  TL   ++ SLL P
Sbjct:   82 VALALAVAAGFYHHEAASGIEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLSFGLTGAVIMRGVFIIFGEALTHRFKPASLIFAAILLFSAAKLALSDEEDEEDLSNNAIVKFANSVLPVSDAYSGDRFFVRNNGIKVATPLLLVLLVVEISDLVFALDSVPAVLGVSDRTSVIYVSNVLAVLGLRSLYFLLADSIANLRFLQPALAFVLAFIGAKMGASVFQFEVPVTLSLSVVVSTLGSAVLASLLFP 338          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A5J4YHZ0_PORPP (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHZ0_PORPP)

HSP 1 Score: 233 bits (593), Expect = 5.990e-70
Identity = 141/303 (46.53%), Postives = 200/303 (66.01%), Query Frame = 0
Query:   52 AVSASRSDP-SHIKSKGKSLSALSLLPLPTPHVLHTLLWLLCAALVAVTVAFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLL--DDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFFV------QDGA---RTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILS 342
            A+  +R DP SH  +K +     +L+      +++ L W+  A+ V V V F  G+   +E+ TAYIVEYSLSVDNLFVFLL+FR+FKV   AQ+ VL +GI GA  +RGI ILAG+ L   F W+++ FA  L++SA K+L+   +D++ DL  N I++F+R +L  +++Y GDKF+       + GA   + + TPL++ L++IE+SDVVFALDSVPAVLGIS+   V+Y SN++AI+GLRSLFFVV + +  LR+L+  L +VL FIG K+ A   GYD     SL +V  TL  GI+ S
Sbjct:   80 ALRMTREDPDSHAATKTEE----TLIAKEKRDLVNVLSWVALASAVGVGVYFQYGYDRVVEYVTAYIVEYSLSVDNLFVFLLLFRFFKVERAAQEKVLSWGIFGAAAMRGIFILAGEELEHRFTWVSLLFAAFLLFSAAKILVAGGEDEEDDLSDNSIVSFARKLLNFSDHYDGDKFWTTVPVEGRTGAGALQRVGTPLLLCLISIEISDVVFALDSVPAVLGISDSALVIYMSNLMAILGLRSLFFVVEDAVANLRYLQPCLGVVLGFIGAKLAASTFGYDIDTLQSLGIVLGTLTTGIVAS 378          
BLAST of Gcaud7571.t1 vs. uniprot
Match: A0A7S0ZCP1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCP1_9RHOD)

HSP 1 Score: 226 bits (575), Expect = 3.260e-69
Identity = 123/237 (51.90%), Postives = 172/237 (72.57%), Query Frame = 0
Query:  119 EYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRYGILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLL---DDDDDADLEHNRIIAFSRSVLPVAEYYAGDKFF--VQDGARTIVTPLMVVLVAIELSDVVFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQSLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQD 350
            EYSLSVDNLFVFLL+F+YFKVP  +Q+ VL YGI+GA  +R   I+ G+ L   F+W+++ F+ +LI SAV++ +   DDD+D DL  N I+ FS+S+L  +E Y GDKF+  +++GA+ + TPL++ L+ +ELSDVVFALDSVPAVLGIS++TFV+Y+SN++AI+GLRSLFFVV + +  LRFL+  L  VLAF+GVK+     GY     VSL ++   L+ G+ LS   PE + 
Sbjct:    1 EYSLSVDNLFVFLLLFQYFKVPRKSQEKVLNYGIIGAASMRLAFIVVGEALEKRFEWVSLIFSFILIVSAVQIFVSGGDDDEDEDLSGNSIVQFSKSLLSFSEKYDGDKFWSELENGAK-VATPLLLTLICVELSDVVFALDSVPAVLGISDNTFVIYSSNLMAILGLRSLFFVVEDAVANLRFLQPCLGAVLAFVGVKLGVSVFGYTIDTTVSLGIILALLSTGVGLSYAFPENKS 236          
The following BLAST results are available for this feature:
BLAST of Gcaud7571.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ03_9FLOR2.250e-14070.64Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A1X6PEJ8_PORUM1.260e-7952.17Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YSR0_PORPP4.150e-7750.19Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A7S0T6N1_9RHOD4.270e-7652.06Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S3ABX2_9RHOD1.480e-7554.36Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZLL3_9RHOD1.030e-7452.31Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6N6PIW2_9BACT1.700e-7044.85TerC family protein n=1 Tax=Verrucomicrobia bacter... [more]
A0A2V3IQ79_9FLOR2.610e-7049.42Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A5J4YHZ0_PORPP5.990e-7046.53Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A7S0ZCP1_9RHOD3.260e-6951.90Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 114..315
e-value: 5.6E-46
score: 156.5
IPR022369Integral membrane protein TerC, riboswitch-linkedTIGRFAMTIGR03718TIGR03718coord: 84..346
e-value: 6.6E-92
score: 306.2
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 84..349
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 84..349
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 302..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 255..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 346..359
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 323..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..301
NoneNo IPR availableTMHMMTMhelixcoord: 302..319
NoneNo IPR availableTMHMMTMhelixcoord: 83..102
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 147..166
NoneNo IPR availableTMHMMTMhelixcoord: 267..289
NoneNo IPR availableTMHMMTMhelixcoord: 176..193
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 323..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1149_length_13302_cov_3.963742contigNODE_1149_length_13302_cov_3.963742:2657..3736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7571.t1Gcaud7571.t1Gracilaria caudata M_176_S67 malemRNANODE_1149_length_13302_cov_3.963742 2657..3736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7571.t1 ID=Gcaud7571.t1|Name=Gcaud7571.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=360bp
MASRALATGVAASIARPVAVSHAALPRCNSHGRMLSRLPLPEGGAPNASR
GAVSASRSDPSHIKSKGKSLSALSLLPLPTPHVLHTLLWLLCAALVAVTV
AFVRGWHSALEFTTAYIVEYSLSVDNLFVFLLIFRYFKVPSDAQQTVLRY
GILGAMVLRGIMILAGKVLIDSFQWIAIAFALLLIYSAVKLLLDDDDDAD
LEHNRIIAFSRSVLPVAEYYAGDKFFVQDGARTIVTPLMVVLVAIELSDV
VFALDSVPAVLGISNDTFVVYTSNILAIMGLRSLFFVVSNTIGTLRFLKQ
SLSIVLAFIGVKMIAGCLGYDFGVAVSLTVVTVTLAVGIILSLLLPERQD
VPLSPSNSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005496Integral_membrane_TerC
IPR022369Integral_membrane_TerC_rswitch