Gcaud7548.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7548.t1
Unique NameGcaud7548.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length130
Homology
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A2V3IL20_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL20_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 1.870e-35
Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MNAHTAFASSFTPALTTTTNSFISPVTIRAPKSLIAAPRMILRTKEKQTVVQSPYRTLEANRAAKLNSAYSGPQGFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIMFSPLTH 119
            M   TAF SSF P+   TT+ F    +     +  AAPRM L TK      +S + ++E NR AKL S Y GPQGFTPYAEKVNGRLAQ+GF+IGL+TEIITGKGI++QILIMFSPLT 
Sbjct:    1 MACETAFVSSFAPSAPITTSPFRPARSSHRVATFSAAPRMALGTKSPDKE-KSTFTSIEDNRVAKLESEYRGPQGFTPYAEKVNGRLAQMGFLIGLITEIITGKGINEQILIMFSPLTR 118          
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A2V3IEM4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM4_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 3.770e-35
Identity = 69/119 (57.98%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MNAHTAFASSFTPALTTTTNSFISPVTIRAPKSLIAAPRMILRTKEKQTVVQSPYRTLEANRAAKLNSAYSGPQGFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIMFSPLTH 119
            M   TAF SSF P+   TT+ F  P +        AAPRM L T       +S + ++E NRAA+L+S Y GPQGFTPYAEKVNGRLAQ+GF+I L+TEIITGKGI++QILIMFSPLT 
Sbjct:    1 MTCATAFVSSFAPSAPITTSPFRPPRSSHRVPPFSAAPRMALTTNSADKK-KSTFTSIEDNRAARLDSEYRGPQGFTPYAEKVNGRLAQMGFLIALITEIITGKGINEQILIMFSPLTR 118          
BLAST of Gcaud7548.t1 vs. uniprot
Match: M2W373_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W373_GALSU)

HSP 1 Score: 63.9 bits (154), Expect = 1.810e-10
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   52 QSPYRTLEANRAAKLNSAYSGPQGFTPYAEKVNGRLAQLGFVIGLLTEI 100
            +SPY+ LE N  AK N+ Y GPQGFTPYAE VNGRLA +GF   ++ E+
Sbjct:   54 ESPYKKLEENVQAKKNAEYRGPQGFTPYAETVNGRLAMIGFFSMIVAEL 102          
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A7S1TPX3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TPX3_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 1.440e-8
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   52 QSPYRTLEANRAAKLNSAYSGPQGFTPYAEKVNGRLAQLGFVIGLLTEIIT 102
            ++ +  +EAN+ +  N+A   PQGFTPYAE VNGR+A LGF + LLTE I+
Sbjct:   53 ETKFEAIEANKISAKNAADVEPQGFTPYAELVNGRMAMLGFTLALLTECIS 103          
BLAST of Gcaud7548.t1 vs. uniprot
Match: Q2JR34_SYNJA (CAB/ELIP/HLIP family protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=Q2JR34_SYNJA)

HSP 1 Score: 56.6 bits (135), Expect = 2.120e-8
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   75 GFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIM 113
            GFTP+AEK NGRLA LGFVIG+ TE++TG+GI  QI +M
Sbjct:   18 GFTPFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM 56          
BLAST of Gcaud7548.t1 vs. uniprot
Match: UPI000684C737 (chlorophyll a/b-binding protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI000684C737)

HSP 1 Score: 55.8 bits (133), Expect = 4.760e-8
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   65 KLNSAYSGPQ-GFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQI 110
            + N   S P+ GFT YAEK NGRLA LGFVIGL TE +TG+GI  Q+
Sbjct:   12 EANLGLSRPKLGFTDYAEKFNGRLAMLGFVIGLATEFLTGQGILSQL 58          
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A0D6AF44_9CHRO (CAB/ELIP/HLIP family protein n=1 Tax=Geminocystis sp. NIES-3708 TaxID=1615909 RepID=A0A0D6AF44_9CHRO)

HSP 1 Score: 55.5 bits (132), Expect = 4.890e-8
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   75 GFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIM 113
            GFTP+AE  NGRLA LGFVIG+ TE++TGKGI  Q+ +M
Sbjct:    9 GFTPFAENWNGRLAMLGFVIGIATELLTGKGILAQLGLM 47          
BLAST of Gcaud7548.t1 vs. uniprot
Match: E0UGJ8_GLOV7 (High intensity light-inducible lhc-like protein n=2 Tax=Aphanothecaceae TaxID=1890450 RepID=E0UGJ8_GLOV7)

HSP 1 Score: 54.7 bits (130), Expect = 9.760e-8
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   75 GFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIM 113
            GFT +AE  NGRLA LGFVIG+LTE++TGKGI  Q+ +M
Sbjct:    9 GFTSFAENWNGRLAMLGFVIGILTELLTGKGILSQLGLM 47          
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A6P0QIB6_9CYAN (High light inducible protein n=1 Tax=Microcoleus sp. SIO2G3 TaxID=2607795 RepID=A0A6P0QIB6_9CYAN)

HSP 1 Score: 54.3 bits (129), Expect = 1.380e-7
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   75 GFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIM 113
            GFTP+AE  NGRLA LGFVIGL TE ITG+ I QQI +M
Sbjct:    9 GFTPFAETWNGRLAMLGFVIGLATEWITGRNILQQIGLM 47          
BLAST of Gcaud7548.t1 vs. uniprot
Match: A0A8J2TM81_9CHRO (CAB/ELIP/HLIP family protein n=1 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2TM81_9CHRO)

HSP 1 Score: 53.9 bits (128), Expect = 1.860e-7
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   72 GPQGFTPYAEKVNGRLAQLGFVIGLLTEIITGKGIDQQILIM 113
            G  GFT +AE  NGRLA LGF IG+LTE++TGKGI  QI +M
Sbjct:    4 GKFGFTAFAENWNGRLAMLGFTIGILTELMTGKGILAQIGLM 45          
The following BLAST results are available for this feature:
BLAST of Gcaud7548.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IL20_9FLOR1.870e-3558.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEM4_9FLOR3.770e-3557.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2W373_GALSU1.810e-1059.18Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S1TPX3_9RHOD1.440e-852.94Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
Q2JR34_SYNJA2.120e-869.23CAB/ELIP/HLIP family protein n=4 Tax=Cyanobacteria... [more]
UPI000684C7374.760e-861.70chlorophyll a/b-binding protein n=1 Tax=Synechococ... [more]
A0A0D6AF44_9CHRO4.890e-866.67CAB/ELIP/HLIP family protein n=1 Tax=Geminocystis ... [more]
E0UGJ8_GLOV79.760e-866.67High intensity light-inducible lhc-like protein n=... [more]
A0A6P0QIB6_9CYAN1.380e-771.79High light inducible protein n=1 Tax=Microcoleus s... [more]
A0A8J2TM81_9CHRO1.860e-764.29CAB/ELIP/HLIP family protein n=1 Tax=Chroococcus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 67..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_232_length_35106_cov_4.900328contigNODE_232_length_35106_cov_4.900328:10421..10810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7548.t1Gcaud7548.t1Gracilaria caudata M_176_S67 malemRNANODE_232_length_35106_cov_4.900328 10421..10810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7548.t1 ID=Gcaud7548.t1|Name=Gcaud7548.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=130bp
MNAHTAFASSFTPALTTTTNSFISPVTIRAPKSLIAAPRMILRTKEKQTV
VQSPYRTLEANRAAKLNSAYSGPQGFTPYAEKVNGRLAQLGFVIGLLTEI
ITGKGIDQQILIMFSPLTHVAAVLAGIAQ*
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