Gcaud7341.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7341.t1
Unique NameGcaud7341.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length384
Homology
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BLAST of Gcaud7341.t1 vs. uniprot
Match: R7QLR3_CHOCR (BTB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLR3_CHOCR)

HSP 1 Score: 429 bits (1104), Expect = 8.200e-146
Identity = 222/380 (58.42%), Postives = 292/380 (76.84%), Query Frame = 0 
Query:    1 MAFAQTLLRKMRSDSISDKHYYDIFFVVQSRHRDGTPSETRLGAHRVVLSALSDTFESCCNAVPNQPH----SEILVTDCSAAAVREALQIVYGGEMTDSQNSIVLALEVWHFGVLFNVEYLIQLARSTCLEKLSTENCLRILDFAVSVDDQNVVEQLQNYTADNANFAHVIASPHFNRLSFDVIAALPRPGKGECAWPEILTFEKVWFDALIKWLENALNEAAEKQPKSKV-------------------DTVPLIRKVLDLVDFTRMKTHELREVSTNAIAVQCASFSPGLVSVLLTRSEQLESTILERNIDLDVIGQKYQQALCDADEADRKSRSAAEKLEKVQTAKLSLERRFDDVRRKKSP-NSRAPPANAARRK 356
            MAFAQTLL+KM SDS+++KHY D++F VQ    DGT SETRLGAHRVVLSA+SD FE       + P     +EI++ +CSAAAVRE+L+I+YGGE+ D++ S++LALE+WHFGVLF+V++LIQLAR++CLE LST+NCLRILDFAV V+D  +V++LQNY ++NANF+HVI SP F RL F V+++L RPGKGECAWPEILTFEKVWFDAL+KWL + ++    K P +K                    +++ L++K+L L+DFTRMKTHELR+VS N IAV   +F+  LV+VLLTR+EQLE TILERNIDLDV+GQKYQQALC+ DEA+RK+R+A EK +K+Q AK  +E+R++++RR+    +S  P  N+ARRK
Sbjct:   37 MAFAQTLLKKMLSDSLTEKHY-DVYFHVQQTLHDGTLSETRLGAHRVVLSAVSDMFEQ--QLTKSDPSRGVANEIIIRNCSAAAVRESLEIMYGGELRDAKTSVLLALEIWHFGVLFHVDHLIQLARASCLENLSTDNCLRILDFAVHVEDVEIVDKLQNYASENANFSHVITSPDFERLDFKVVSSLVRPGKGECAWPEILTFEKVWFDALVKWLTSRISYQPYKDPPAKEQPLNGAQPQTPSIVRYPTQESIVLVQKILALIDFTRMKTHELRDVSKNEIAVMSPAFAGDLVTVLLTRAEQLEGTILERNIDLDVLGQKYQQALCEHDEAERKARAAIEKTDKLQAAKQLIEKRYEELRRRXXXTSSNGPSMNSARRK 413
The following BLAST results are available for this feature:
BLAST of Gcaud7341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QLR3_CHOCR8.200e-14658.42BTB domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..340
NoneNo IPR availableGENE3D1.25.40.420coord: 133..266
e-value: 2.6E-7
score: 32.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..362
NoneNo IPR availablePANTHERPTHR45632LD33804Pcoord: 7..259
NoneNo IPR availableCDDcd14733BACKcoord: 131..184
e-value: 8.2053E-5
score: 38.0257
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 18..122
e-value: 1.1E-7
score: 32.1
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 22..97
score: 11.584966
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 2..132
e-value: 1.4E-11
score: 46.4
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 11..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1084_length_14023_cov_4.104579contigNODE_1084_length_14023_cov_4.104579:52..1344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7341.t1Gcaud7341.t1Gracilaria caudata M_176_S67 malemRNANODE_1084_length_14023_cov_4.104579 52..1344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7341.t1 ID=Gcaud7341.t1|Name=Gcaud7341.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=384bp
MAFAQTLLRKMRSDSISDKHYYDIFFVVQSRHRDGTPSETRLGAHRVVLS
ALSDTFESCCNAVPNQPHSEILVTDCSAAAVREALQIVYGGEMTDSQNSI
VLALEVWHFGVLFNVEYLIQLARSTCLEKLSTENCLRILDFAVSVDDQNV
VEQLQNYTADNANFAHVIASPHFNRLSFDVIAALPRPGKGECAWPEILTF
EKVWFDALIKWLENALNEAAEKQPKSKVDTVPLIRKVLDLVDFTRMKTHE
LREVSTNAIAVQCASFSPGLVSVLLTRSEQLESTILERNIDLDVIGQKYQ
QALCDADEADRKSRSAAEKLEKVQTAKLSLERRFDDVRRKKSPNSRAPPA
NAARRKPQSVLRTSSTLFQKFRSRINSKGDQPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ_sf