Gcaud7205.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7205.t1
Unique NameGcaud7205.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length209
Homology
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BLAST of Gcaud7205.t1 vs. uniprot
Match: A0A2V3INK4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK4_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 2.130e-17
Identity = 51/158 (32.28%), Postives = 89/158 (56.33%), Query Frame = 0 
Query:    8 MPLVPSDGSTTFVDQPCLRVDNGKALDQTFPTTYEAAAILLTCSTKQGTVVTHFSGQRSSVSSSVLCDNTPLISFDEEADRLDMPVGSKQSFCQNGLCVFFEATGNQVLLSALISEDQVPSLRGIQGSRVPFLRTTLSFAFDGMLQTFASRMLSAFAQ 165
            +P +P     T ++ PC  V++  A+   F  ++E  ++L TC+T     +THF+G  S  SS+++CD +PLIS++      +  + +  + C    CV   +  + V LSA I +D+V +LR  Q   +PF+ T + F FDG+L+ FA  +L A+++
Sbjct:   33 LPRIPIRTQRTRME-PCSIVNSHPAVGS-FSESFETFSVLTTCATNNDGFITHFAGNYSLESSALVCDESPLISYNYSGST-NRTLDNNPALCGPDTCVVVFSESDTVSLSAAIRKDEVETLRN-QSISIPFIETKVFFEFDGLLEEFAMNLLEAYSK 186
The following BLAST results are available for this feature:
BLAST of Gcaud7205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INK4_9FLOR2.130e-1732.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_476_length_24381_cov_4.240099contigNODE_476_length_24381_cov_4.240099:4619..5367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7205.t1Gcaud7205.t1Gracilaria caudata M_176_S67 malemRNANODE_476_length_24381_cov_4.240099 4619..5367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7205.t1 ID=Gcaud7205.t1|Name=Gcaud7205.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=209bp
MQQLILGMPLVPSDGSTTFVDQPCLRVDNGKALDQTFPTTYEAAAILLTC
STKQGTVVTHFSGQRSSVSSSVLCDNTPLISFDEEADRLDMPVGSKQSFC
QNGLCVFFEATGNQVLLSALISEDQVPSLRGIQGSRVPFLRTTLSFAFDG
MLQTFASRMLSAFAQNNFHVDIRWALPTFDLVFASLASALHILLDEGAVR
SPQNLHDV*
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