Gcaud3236.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3236.t1
Unique NameGcaud3236.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length421
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud3236.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 45..186
e-value: 1.1E-11
score: 44.9
IPR042277Vacuolar protein sorting-associated protein IST1-likeGENE3D1.20.1260.60coord: 19..204
e-value: 2.1E-12
score: 48.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_147_length_43555_cov_4.601095contigNODE_147_length_43555_cov_4.601095:29109..30371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3236.t1Gcaud3236.t1Gracilaria caudata M_176_S67 malemRNANODE_147_length_43555_cov_4.601095 29109..30371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3236.t1 ID=Gcaud3236.t1|Name=Gcaud3236.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=421bp
MGFFRRGKSRQVTNEPLPEWDDTRWRSHLRASALGVDYHCNLYVEVINNE
RKEAATHFKDNDEARARSHAESSFRNKRIISALGALAPITNALHQRAEPL
AGYTSIAAIPDPARSDIITIIYAASRLQMSYLTDMVEFLREQFGSYHIEQ
IQQGLGDLFMNVNPTVRDSLSTMTPSREDANAELASAVKEYYGISVNPVP
VHAVTESKTSASSMIPAPPFSASVQSNVPLPPPVRTTKETLRKTHTTPLS
GHSSEMGPTSPELHNSQGAPRHEHNLKTPSPPRPERGRMFAARTETPQHR
REQALQSQHHVETPFTSGIDDVGLPTGRSLFTDEVGEPTNSEKRGLQVRQ
LDTLAGANSSPLSGKGIRDISSQKSRPMHEEEMKKDREVPEHLKSFQDSD
EMLFRRYEQLKEVWELVTVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
IPR042277IST1-like