Gcaud3043.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud3043.t1 vs. uniprot
Match: A0A2V3IPJ1_9FLOR (Transcription elongation factor 1 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPJ1_9FLOR) HSP 1 Score: 162 bits (410), Expect = 4.220e-49 Identity = 78/91 (85.71%), Postives = 82/91 (90.11%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAANR--AAGVQAE 89
MGKRKRATKPPPKKKMPKLEKVFNCPFCGHE SVEC + +SEN+GKLECRLCGVRYSTTVGRLEE IDVYYKWIDACDAAN+ AA Q E
Sbjct: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHENSVECEVLRSENLGKLECRLCGVRYSTTVGRLEEAIDVYYKWIDACDAANQGGAADEQVE 91
BLAST of Gcaud3043.t1 vs. uniprot
Match: UPI001CC465E2 (transcription elongation factor 1 homolog n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC465E2) HSP 1 Score: 108 bits (271), Expect = 2.220e-28 Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAANRAAG 85
MGKRK + KP PKKKM KLE VFNCPFC HE+SV CTI + E IG+L C +C +YST + L E ID+Y +WID C+ N G
Sbjct: 1 MGKRKSSAKPAPKKKMEKLESVFNCPFCNHEKSVNCTIDRKEMIGELTCCICQEKYSTAINNLSEPIDIYSEWIDECEKVNDMDG 85
BLAST of Gcaud3043.t1 vs. uniprot
Match: ELOF1_ORYSJ (Transcription elongation factor 1 homolog n=36 Tax=Mesangiospermae TaxID=1437183 RepID=ELOF1_ORYSJ) HSP 1 Score: 102 bits (253), Expect = 8.720e-26 Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK A KPPPKK+M KL+ VF+CPFC H SVEC I IG+ CR+C +STTV L E ID+Y +WID C+ N
Sbjct: 1 MGKRKSAAKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVN 81
BLAST of Gcaud3043.t1 vs. uniprot
Match: A0A443PI70_9MAGN (Transcription elongation factor 1 homolog n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PI70_9MAGN) HSP 1 Score: 100 bits (250), Expect = 2.350e-25 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK TKPPPKK++ KL+ VFNCPFC HE++V+C + I +L C +C Y+T++ L E +DVY +WID C+ AN
Sbjct: 1 MGKRKSRTKPPPKKRLDKLDMVFNCPFCNHEKTVDCLFDRGNKIAELSCGVCKESYNTSINNLTEAVDVYSEWIDECERAN 81
BLAST of Gcaud3043.t1 vs. uniprot
Match: UPI001C4F831C (transcription elongation factor 1 homolog n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F831C) HSP 1 Score: 101 bits (251), Expect = 2.390e-25 Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAANRAAG 85
MGKRK K PKK+M KLE VFNCPFC HE+SV C I + E IG++ C +C RYST + L E ID+Y +WID C+ N G
Sbjct: 1 MGKRKSRPKTEPKKRMEKLESVFNCPFCNHEKSVNCNIDRKEMIGEVMCIICQERYSTAITNLSEPIDIYSEWIDECERVNEMDG 85
BLAST of Gcaud3043.t1 vs. uniprot
Match: UPI0009016FB3 (transcription elongation factor 1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009016FB3) HSP 1 Score: 100 bits (249), Expect = 3.330e-25 Identity = 46/81 (56.79%), Postives = 54/81 (66.67%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK KPPPKK+M KL+ VF+CPFC H SVEC I IG+ EC +C YSTTV L E ID+Y +WID C+ N
Sbjct: 1 MGKRKSKAKPPPKKRMDKLDTVFSCPFCSHGTSVECRIDMKNAIGEAECNICKESYSTTVTALTEPIDIYSEWIDECERVN 81
BLAST of Gcaud3043.t1 vs. uniprot
Match: A0A6A4LB41_9ERIC (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LB41_9ERIC) HSP 1 Score: 100 bits (249), Expect = 3.520e-25 Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAANRAAGVQAE 89
MGKRK KPPPKK+M KL+ VF+CPFC H SVEC I +IG+ CR+C +STTV L E ID+Y +WID C+ N AE
Sbjct: 1 MGKRKSKAKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNSIGEAICRICQENFSTTVTALTEPIDIYSEWIDECELVNNVEDDGAE 89
BLAST of Gcaud3043.t1 vs. uniprot
Match: A0A834X272_9FABA (Transcription elongation factor 1 homolog n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X272_9FABA) HSP 1 Score: 100 bits (248), Expect = 4.860e-25 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK KPPPKK+M KL+ VF+CPFC H SVEC + +IG+L CR+C +STT+ L E IDVY +WID C+ N
Sbjct: 1 MGKRKSRRKPPPKKRMNKLDTVFSCPFCNHGSSVECRLDTRNSIGELACRICQENFSTTITALSEPIDVYSEWIDECERFN 81
BLAST of Gcaud3043.t1 vs. uniprot
Match: M2Y2D5_GALSU (Transcription elongation factor 1 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2D5_GALSU) HSP 1 Score: 99.8 bits (247), Expect = 5.820e-25 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK KP K K P L+KVFNCPFCGHE++V+CTISKS+ IG + CR+C Y+ V L+E +DVY +WID AN
Sbjct: 1 MGKRKSRKKPIQKPKKPTLDKVFNCPFCGHEKTVDCTISKSKGIGSVSCRVCQASYTAEVTHLDEAVDVYAEWIDKTVQAN 81
BLAST of Gcaud3043.t1 vs. uniprot
Match: M5WI77_PRUPE (Transcription elongation factor 1 homolog n=3 Tax=Prunus TaxID=3754 RepID=M5WI77_PRUPE) HSP 1 Score: 99.8 bits (247), Expect = 7.290e-25 Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHEESVECTISKSENIGKLECRLCGVRYSTTVGRLEEEIDVYYKWIDACDAAN 81
MGKRK + KPPPKK+M KL+ VF+CPFC H SVEC I IG+ CR+C +STT+ L E IDVY +WID C+ N
Sbjct: 1 MGKRKSSAKPPPKKRMDKLDTVFSCPFCSHGTSVECRIDMKNLIGEASCRICQESFSTTITALSEPIDVYSEWIDECERVN 81 The following BLAST results are available for this feature:
BLAST of Gcaud3043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud3043.t1 ID=Gcaud3043.t1|Name=Gcaud3043.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=135bpback to top |