Gcaud2626.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2626.t1
Unique NameGcaud2626.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length342
Homology
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A2V3IRC3_9FLOR (Zinc finger protein-like 1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC3_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 1.640e-114
Identity = 179/339 (52.80%), Postives = 235/339 (69.32%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSASTSKLSHAIRKRLRNMTTITRSSAPTIATVTSWDDSDDWKRTSSRNTMNLKLEQR-----QTDSESNSKIVSETDCSDGIG---GKGALQAKSSADGTPSRVSMAKRPLPPPVQNNARDLRLDLELLPQDKDGSGAGIKTAKRDAQSGGLITSTSMRKVMKMGNRRLIDLRKLMSTNRRQLLTIIACVACIILVSFLMSGDDEFNVVVRPAAEHVSLPHVRVNPAFLQ-PRKTG 330
            MGRC  CR+QTQHFCF+HQ F CE CLVAD+SVH RCVVRTYRNFIED+SY WPPVCAAC  QL+ + D +RR CLHVEHA+CIE S   +  C  C T L+D +  S+L+ AIR+RL  MTT++  SAPT+ T +SWDDS  W  ++S NT+NLK +       +   E +S+IVS+TDCSD +         +  ++ +GTPSRVSMA R +  P +    D R+D+++LPQ    +    K  KRDA S  ++TSTS+RKV+K+GNRR IDLRK +STNRRQL T + C  CI++++FLMSG+++     RP  + VSLPHV VNPAF++ P+K G
Sbjct:    1 MGRCGACRAQTQHFCFIHQTFVCETCLVADDSVHGRCVVRTYRNFIEDASYQWPPVCAACATQLESNVDTIRRTCLHVEHATCIENSRAVNRECPLCNTILVDKSDHSQLAQAIRRRLHTMTTVSLGSAPTVITASSWDDSARWT-SNSNNTLNLKRQSTLPKALEDHPEDHSRIVSQTDCSDALNHIKSHSNPERIATKEGTPSRVSMAARTVSTPPKPTQVDARIDMDILPQKVGHTSRTAKPVKRDATSSAIVTSTSVRKVIKLGNRRFIDLRKRLSTNRRQLATFLVCAICIVVITFLMSGEEQLPTASRPVTDQVSLPHVIVNPAFIKKPQKPG 338          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S1TJ70_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJ70_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 6.960e-27
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSA 105
            MGRC  CR QTQ+FC+VHQAF C  C+V    +H RCVV +YR +++DSSY WPP C  C  +L+ D   +R ICLH+ H SCI  S    H C  C  P+L S+
Sbjct:    1 MGRCGECRRQTQNFCYVHQAFVCSPCVVT-VPLHERCVVSSYRKWVQDSSYEWPPTCVTCQDRLEGDQPPLRLICLHMAHHSCITSSESLGHKCPACGEPILPSS 104          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S1EQU9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQU9_9RHOD)

HSP 1 Score: 114 bits (284), Expect = 8.820e-27
Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSAS-TSKLSHAIRKRL 118
            MGRC+ CR QTQ+FCFVHQ F C A LVA ++ H  CVV +YR +++DS+Y WPP C+ C  ++  D + +R  CLH+ HA C+  S PP   CS C+  ++   + T+ L+  +R +L
Sbjct:    1 MGRCAECRKQTQNFCFVHQEFICPASLVASDA-HDLCVVGSYRKWVQDSAYPWPPQCSMCSNEIKTDENVIRLTCLHILHAKCLVESPPPQGACSICRAIVVPPPNDTTPLAQKLRAQL 118          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A5J4YYS8_PORPP (Zinc finger protein-like 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYS8_PORPP)

HSP 1 Score: 114 bits (286), Expect = 6.400e-25
Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLD-SASTSKLSHAIRKRL 118
            MGRC  CR QTQ FCFV   F C A L A+++ H RCVV +YR +++DSSY WPP CA C ++++++ ++VR  CLHV HA C+  + PP   C  C TP++     T+ L+  +R+++
Sbjct:    1 MGRCGDCRKQTQIFCFVCHEFVCPASL-AEKAAHDRCVVGSYRKWVQDSSYKWPPECALCSQEIEVEQESVRLTCLHVLHAKCLVDAPPPALACPECGTPIVPLPTDTAPLAEKLRRQM 118          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S1TLC5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLC5_9RHOD)

HSP 1 Score: 110 bits (274), Expect = 1.750e-23
Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSAS-TSKLSHAIRKRL 118
            MGRC+ CR QTQ FCFVHQ F C A L + E+ H  CVV +YR +++DSSY WPP CA C  +L I+ +  R  CLH  HA C+  S P + +C  C   ++   + T+ L+  +R +L
Sbjct:    1 MGRCAECRKQTQTFCFVHQEFICPASLASAEA-HALCVVGSYRKWVQDSSYEWPPKCALCATELTIETEVARLTCLHALHAKCLAYSPPQNLSCPVCAAAIVPGPNDTTPLAQKLRHQL 118          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S0FZ45_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ45_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 2.570e-23
Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSASTSKLSHA--IRKRLRNM 121
            MGRC  CRSQTQ+FC VHQ FAC  CLV D   H RC V  YR+++ DSSY WPP C  C ++L  D    R +CL +   SC+   +P    C  C+T ++ S ST K S A  +R +L+ +
Sbjct:    1 MGRCVGCRSQTQNFCHVHQEFACVNCLV-DAPGHARCHVGAYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIVEDSCLASKAPEDGQCPHCETSMIPS-STDKNSIASHLRSKLKGL 121          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S2ZKC9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKC9_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 6.060e-23
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSAS-TSKLSHAIRKRLRNM 121
            MGRC  CR QTQ+FC VHQ F C  CLV D   H RC V +YR+++ DSSY WPP C  C ++L  D    R +CL +   SC+   +P    C  C+T L+ S++ T+ ++  +R +L+++
Sbjct:    1 MGRCVGCRKQTQNFCHVHQEFVCVYCLV-DARGHARCHVGSYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIAEDSCLANKAPEDGKCPHCETSLIPSSTDTNSIASHLRSKLQDL 121          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S2ZLH4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLH4_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 2.110e-22
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSAS-TSKLSHAIRKRLRNM 121
            MGRC  CR QTQ+FC VHQ F C  CLV D   H RC V +YR+++ DSSY WPP C  C ++L  D    R +CL +   SC+   +P    C  C+T L+ S++ T+ ++  +R +L+++
Sbjct:    1 MGRCVGCRKQTQNFCHVHQEFVCVYCLV-DARGHARCHVGSYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIAEDSCLANKAPEDGKCPHCETSLIPSSTDTNSIASHLRSKLQDL 121          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S0FY22_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FY22_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 2.940e-21
Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSASTSKLSH 112
            MGRC  CRSQTQ+FC VHQ FAC  CLV D   H RC V  YR+++ DSSY WPP C  C ++L  D    R +CL +   SC+   +P    C  C+  L + A  S   H
Sbjct:    1 MGRCVGCRSQTQNFCHVHQEFACVNCLV-DAPGHARCHVGAYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIVEDSCLASKAPEDGQCPHCEVRLPEKALNSTRLH 111          
BLAST of Gcaud2626.t1 vs. uniprot
Match: A0A7S2ZR03_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR03_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 4.390e-21
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 0
Query:    1 MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSSYVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTPLLDSASTS-KLSHAIRKRLRNMTTITRSSA 129
            MGRC+ CR Q Q+FC VHQ F C  CLV     H RC V +YR +++DSSY WPP C  C K+L  D    R  CL +   SC+    PP   C  C+T L+   + +  ++ A+R +L+++  + + S+
Sbjct:    1 MGRCTGCRKQIQNFCHVHQEFVCLECLVGSPG-HARCYVGSYRGWVQDSSYPWPPKCVICSKELLSDDGVTRLTCLAIVEDSCLMNLVPPDGQCPHCETCLVPPPTDAGAIAQALRTKLKDVPWVNKFSS 129          
The following BLAST results are available for this feature:
BLAST of Gcaud2626.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IRC3_9FLOR1.640e-11452.80Zinc finger protein-like 1-like n=1 Tax=Gracilario... [more]
A0A7S1TJ70_9RHOD6.960e-2750.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1EQU9_9RHOD8.820e-2744.54Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YYS8_PORPP6.400e-2544.54Zinc finger protein-like 1 n=1 Tax=Porphyridium pu... [more]
A0A7S1TLC5_9RHOD1.750e-2344.54Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0FZ45_9RHOD2.570e-2345.53Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZKC9_9RHOD6.060e-2341.80Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZLH4_9RHOD2.110e-2241.80Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FY22_9RHOD2.940e-2145.54Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZR03_9RHOD4.390e-2139.23Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..297
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 298..341
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..277
NoneNo IPR availableTMHMMTMhelixcoord: 278..297
IPR039043Zinc finger protein-like 1PANTHERPTHR12981ZINC FINGER PROTEIN-LIKE 1coord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_205_length_37462_cov_4.544219contigNODE_205_length_37462_cov_4.544219:15412..16587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2626.t1Gcaud2626.t1Gracilaria caudata M_176_S67 malemRNANODE_205_length_37462_cov_4.544219 15412..16587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2626.t1 ID=Gcaud2626.t1|Name=Gcaud2626.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=342bp
MGRCSVCRSQTQHFCFVHQAFACEACLVADESVHRRCVVRTYRNFIEDSS
YVWPPVCAACGKQLDIDGDNVRRICLHVEHASCIEVSSPPHHNCSTCQTP
LLDSASTSKLSHAIRKRLRNMTTITRSSAPTIATVTSWDDSDDWKRTSSR
NTMNLKLEQRQTDSESNSKIVSETDCSDGIGGKGALQAKSSADGTPSRVS
MAKRPLPPPVQNNARDLRLDLELLPQDKDGSGAGIKTAKRDAQSGGLITS
TSMRKVMKMGNRRLIDLRKLMSTNRRQLLTIIACVACIILVSFLMSGDDE
FNVVVRPAAEHVSLPHVRVNPAFLQPRKTGDNPRSVLANDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039043ZFPL1