Gcaud2589.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2589.t1
Unique NameGcaud2589.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length565
Homology
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A2V3IXU2_9FLOR (DET1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXU2_9FLOR)

HSP 1 Score: 421 bits (1082), Expect = 9.000e-137
Identity = 287/669 (42.90%), Postives = 372/669 (55.61%), Query Frame = 0
Query:    7 RRGMLHALRRRETGSLSGNSFRRATYSALVPSSTFIHVQKTQSISSTR-------------------------------------ASHVRIYDTSAFPPPS------------------SLHPDFQLSS-QPNQPSLLLS-VPVPIAASAAQQPQSPSHVHNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMTVTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVIARAREAQNAYVAHREEGSHSNSDKPAASYQPHGNEN--DHNAQDAADVVEEGDDEAEQNEPKETGLGNGMLKNAFYIGLMQRLLVYVYRRMHSEGNASLFYRVIGQYSF----------ERHLFLR--------------------CVL-----------------------DAFVGDEMEAASLPPSRNSVLDEGQRREEENDQGNTTRRD-GIGERADWWSSVASRRGTSERVRRTRLELSRIPMSRQVRMVSPYLDRSLFSYNSERSYVLTARRFAPAKDLGSVKFMSAETGELRFKLATEFSLLDGEVGGERYATDMEDGGLRRRMFLFHPLLPFVMAMEGHRPVNFHVYGH 562
            RRG+L+ALR  ETG +S ++F++A YSALVPSSTFI VQ    ++  R                                     + H   Y+ SAFP  S                    HP   L + +P + S LLS + VP+A    Q  + P+   + P Y+C F +FFTHMYTM I +G   I  D SI T+SGRYLILA+Y+   Q       Q  LPAI  + SM +TF+LVEV +G I DRF+L +D +  A+H GVHFY DMLC+LS RHQ+LHI++++EA+G+FTEERCIG MC+R+D  VIARAREA+N ++A      H    +     Q   +EN  DH +QD  +  EE D+E     PKE GLGNG L+N FY GLM RLLVYVYR M SEGNAS F R++G ++           E HL ++                    C+                        +AFV D M +A+LP  R SV      +EE+       RR+   G R   WS+ + R+G SERVRRT+ EL  IP+S Q R  SPYLDRS+FSYN ++   LT   +  AKD+ +VKFMSAE+GELRFKL++E +LLD     +    D+E+ G RRR FLFHP+LPFVMAME +RPVNFHVYGH
Sbjct:    7 RRGILNALRLLETGHMSRHAFQKALYSALVPSSTFIKVQSVPVVNFRRFTPCGQYLIAFEQNMRDLAVFRLEPGGRKAPPFAPKYSQHPVDYEASAFPLASHKMEHDYSTILAQPDIHPGTHPPHHLFAVRPQRASGLLSAITVPLAP-VPQPNRQPTQATSTPKYSCHFERFFTHMYTMPIASGGETIVSDLSICTTSGRYLILATYELSQQAPIAEQPQLPLPAIVWVVSMHITFHLVEVASGTIVDRFVLKNDNIDMAAHVGVHFYADMLCVLSTRHQLLHIIRVEEAMGRFTEERCIGDMCNREDDLVIARAREAENEHIAR-----HGQRTERGGGTQREQDENAPDHASQD--EDGEEADNEDAPAVPKERGLGNGKLQNRFYTGLMHRLLVYVYRCMVSEGNASSFNRMMGNFTLLIMQKAQFLDEDHLLIKLGSYSNRAQLGGMTCFFVVYCMSSSRILNLFANTSEQLLLTFQKYREAFVADAMVSAALPRPRMSVA-----QEEDGVVERRRRREWNRGGRGASWSNHSHRQG-SERVRRTQTELGHIPVSSQTRHSSPYLDRSIFSYNGDKIDALTGCGWVSAKDVSNVKFMSAESGELRFKLSSEVTLLDENEFRQAVGVDVEEFGRRRRKFLFHPMLPFVMAMENNRPVNFHVYGH 661          
BLAST of Gcaud2589.t1 vs. uniprot
Match: R7QAJ5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAJ5_CHOCR)

HSP 1 Score: 278 bits (711), Expect = 4.200e-81
Identity = 217/591 (36.72%), Postives = 282/591 (47.72%), Query Frame = 0
Query:   86 SLLLSVPVP----IAASAAQQPQSPSHVHNHPS-------YTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMTV--------TFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVIARAREAQNAYVAHREE-----------GSHSN------SDKPAASYQPHGNENDH--------NAQDAADVVEEGDDEAEQNEPKETGLGNGMLKNAFYIGLMQRLLVYVYRRMHSEGNASLFYRVIGQYSF----------ERHLFLR-----------------------CVL-----------------------DAFVGDEMEAASLPPSRNSVLDEGQRREEENDQGNTTRRDGIGERADWWS--SVASRRGTSERVRRTRLELSRIPMSRQVRMVSPYLDRSLFSYNSERSYVLTARRFAPAKDLGSVKFMSAETGELRFKLATEFSLLDGEVGGERYATDMEDGGL---------RRRMFLFHPLLPFVMAMEGHRPV----NFHVYG 561
            S+L  +PVP    IA  AA     P+   N  +       Y+C F++FFT +Y + +      +A +F ++T + RYLILASY P+   + P      LP +   P            T +L+ V +GV+ DRF L +D+V    H GVH  GD+LC+LS+RHQVLHI+K+QE LG+F  E  IGAMC  DD   IARAREA+N+Y   + E           GS S       S  P AS +     + H        NA   A    EG        PKETGLG+G LK+ FY GLMQRLLVYVYRR HSEGN SLFYRV+GQYS           E HL +R                       C+                        DAF+GD   +A+LP           R   END+              W+S  S   R G S   +R R EL+ +PMS Q+R VSPYLDR +FSY+  R   L   R    KDL +VKF+S  TG LRFKL+  +   DG     R+     +GG          R+ ++LFHP  PFV++M+ +  +    NFHV G
Sbjct:  172 SILADLPVPLVGGIAPGAASPEPRPTRNRNSRTRQSDAERYSCTFSRFFTKLYEVPVALNAETLAPEFCLATPTARYLILASYLPRETDNDPNMPALQLPIVGEPPPAVASTRVLERFTLHLLNVESGVVEDRFTLENDFVDLDGHAGVHMRGDILCVLSIRHQVLHIIKVQENLGRFVYECQIGAMCRSDDELEIARAREAENSYQRKQREEERKRSFSSMVGSSSQIQNSRLSSLPDASMRSKKLPSSHPGEGVAGGNAAGLAAPHSEG-----ATPPKETGLGSGKLKSGFYTGLMQRLLVYVYRRYHSEGNQSLFYRVVGQYSLLVMLKAQFLDEDHLLIRLGSLERGGKISDVATTTCFFVVYCISTTTILNLFENRSTELLSTYQRFRDAFIGDPAVSATLP-----------RVHIENDRA-------------WFSTGSAHPRNGRSSSSKRVRAELAALPMSCQMRNVSPYLDRGIFSYDIHRIAALDGTRPQCLKDLDTVKFISVRTGALRFKLSPGYRSGDGGRRSRRHVG--AEGGRHSHSPVSRKRKALYLFHPHYPFVISMDYNLTLPTTYNFHVCG 731          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A7S1XDY5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDY5_9RHOD)

HSP 1 Score: 126 bits (317), Expect = 4.830e-27
Identity = 133/514 (25.88%), Postives = 215/514 (41.83%), Query Frame = 0
Query:   94 PIAASAAQQPQSPSHVHNHPS--YTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLP---AISSLPSMTVTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVIARAREAQNAY----------VAHRE-EGSHSNSDKPAASYQPHGNENDHNAQDAADVVEEGDDEAEQNEPKETGLGNGMLKNAFYIGLMQRLLVYVYRRMHSE-----GNASLFYRVIGQYSFERHLFLRC--------------------VLDAFVGDEMEAASLPPSRNSVLDEGQRREEENDQGNTTRRDGIGERADWWSSVASRRGTSERVRRTRLE-LSRIPMSRQVRMVSPYLDRSLFSYNSERSYVLTARRFAPAKDLGSVKFMSAETGELRFKLATEFSLLDGEVGGERYATDMEDGGLRRRMFLFHPLLPFVMAMEGH----RPVNFHVYG 561
            P+   +  Q  + S VHN PS  +TC F +FFT ++   +  G   +  DF ++TS+ R+LI AS    ++        + L    +I++   M++TF+L ++    I DRF L  D V    H+ VH   D+L ILSMRHQ LHI++I ++ G F +   IG  C   D   I+R ++A N +          +  RE    H+  +    S++ H             V +              G+GNG+ +   + GL+ RLLV+ Y +         G          Q+    H+ +R                     V +   G+ +     P     +L+       EN        + +    D  +    R      + R  +  L  +P++ Q + +SPYL+  +FSY+  +   L        K+  +VKF S  +G LRFKL          + G  Y+ D       + M+LFHP LPFV++M+      + +NFH YG
Sbjct:  202 PLQMHSISQEPTLSRVHNDPSKPFTCSFDRFFTKVFEGPVATGGDSLVEDFCLATSNNRFLIFASRAEISEAGGATQSGEALEEDVSIATAIVMSITFHLFDLAKWRIVDRFSLERDLVDLRQHQHVHLLNDLLLILSMRHQTLHILRIDDS-GFFAKTLQIGTHCSDGDSTAISRGQDALNQFRRLNPRAMDIINERELTDFHTELESTRVSHRRH-------------VTQ-----------ASRGMGNGLSQQGLFTGLLHRLLVFRYHKDRQGLYDKFGYYCSLVMFKAQFLDPAHILIRLGRLEQPMTPVIERKNVPCFMVFNFRSGEVISFLETPRELEKLLE----LYIENYNSFWLLDNPLHRPVDPNAQNELRGLREHSLSRFHMHALMGLPVASQSKNLSPYLNDQIFSYDERKLPALDGSHPLERKEYPTVKFTSRRSGALRFKL----------IPGHPYSKDPA----LKVMYLFHPFLPFVISMQQSLYQGKTINFH-YG 671          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A388KXY9_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KXY9_CHABU)

HSP 1 Score: 98.6 bits (244), Expect = 9.450e-18
Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = 0
Query:  119 FAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSM-TVTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVI 262
            F  FF H+YT+ + +GT  + +DF + T S  Y +LA+  P +  ++PP       A++ +P+M ++TF+LV++  G + DR    DDY+  A + GV  Y D+L ILS+R Q +HI++I+E  G F   R IG  C  DD  V+
Sbjct:  137 FDNFFHHLYTVPLGSGTEILCKDFCLFTDSDTYGVLATSSPPD--NNPPYAHG---AVAGVPAMESITFHLVKICNGEVMDRRRFDDDYIHLAHNAGVFLYEDLLAILSVRFQSIHILQIRET-GLFVNVRTIGNYCREDDELVL 275          
BLAST of Gcaud2589.t1 vs. uniprot
Match: W9QNQ8_9ROSA (Uncharacterized protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QNQ8_9ROSA)

HSP 1 Score: 97.1 bits (240), Expect = 1.520e-17
Identity = 123/494 (24.90%), Postives = 216/494 (43.72%), Query Frame = 0
Query:  109 VHNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMT-VTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVIARAREAQNAYVAHREEGSHSNSDKPAASYQPHGNENDHNAQDAADVVEEGDDEAEQNEPKETGLGNGMLK------NAFYIGLMQRLLVYVYRRM-HSEGNASL--------FY--------RVIGQYSF--ERHLFLRC-VLDAFVGD------------EMEAASLPPSRNSVLDEGQRREEEN-DQGNTTRRDGIGERADWWSSVASRRGTSERVRRTRLE-----------LSRIPMSRQVRMVSPYLDRSLFSYNSERSYVLTARRFAPAKDLGSVKFMSAETGE-LRFKLATEFSLLDGEVGGERYATDMEDGGLRRRMFLFHPLLPFVMAME 550
            VH+ P    +F  FFT +Y +S+ +    I +DF +   S R+ + A+   Q   H  P       AI  +PS+  +TF+L+ +  GV+ D  +  DD+V  A + GV  Y D+L I+S+R+Q +HI++I+++ G   + R IGA C  DD   +                    NS+ P+   +                     D+++Q++  E  + NG+ +      NAF  G+ QRLL +++R + + E N +L        FY         +I +  F    HL ++   +D  V               ME   +     +  DE     E   D  +TT ++ +    ++ SS ++   T E++R  R +           L+ +P++ Q    SPY D+SL+ ++ +   +  A R   + D   +KF+     + LRFK+        G  GG     ++++   +   FLFHP LPF ++++
Sbjct:  129 VHDLPPKAKKFDSFFTQLYCVSLASSNELICKDFFLYMESNRFGLFATSTAQI--HDAPAVGG---AIQGVPSIEKITFHLLRLEDGVVLDEKVFNDDFVNLAHNMGVFLYDDLLAIVSLRYQTVHILQIRDS-GNLVDVRAIGAFCREDDELFL--------------------NSNAPSMGIR---------------------DKSKQHQLTENHVENGLQQSRLSPENAFVSGIKQRLLSFIFRGIWNEETNHTLRVQYLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGAVSRTTDHHPAFFAVYNMETTDIVAFYQNNADELYLLFEHFCDHFHTTSKNSL--YMNFISSHSNNIHTREQLRSLRNKATSSSQFVKKMLASLPINSQALSPSPYFDQSLYRFDEK--LISAADRHRQSTD-HPIKFILRRPPQTLRFKIKP------GPEGG-----NIDNRTKKISSFLFHPFLPFALSIQ 559          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A8B8JA34_PHODC (light-mediated development protein DET1 isoform X1 n=11 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8JA34_PHODC)

HSP 1 Score: 95.9 bits (237), Expect = 3.940e-17
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 0
Query:  110 HNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMT-VTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDDHQVI 262
            H+ P    +F  FFT +Y +S+ +    I +DF +   S ++ + A+   Q+  H  PT +    AI  +PS+  +TFYLV +  GVI D     +D+V  A   GV  Y D+LCI+S+R+Q +HI++I+++ G   + R IG  C  DD   I
Sbjct:   91 HSLPQKAKRFDSFFTQLYCVSLASSNEFICKDFFLYMESHQFGLFATSTAQS--HDAPTTEG---AIDGVPSIERITFYLVRLEDGVILDEKAFCNDFVNLAQSMGVFLYEDLLCIMSLRYQTIHILQIRDS-GNLVDVRNIGIFCREDDELFI 238          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A833RFY7_9POAL (Light-mediated development protein DET1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RFY7_9POAL)

HSP 1 Score: 94.0 bits (232), Expect = 1.080e-16
Identity = 54/150 (36.00%), Postives = 82/150 (54.67%), Query Frame = 0
Query:  110 HNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMT-VTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDD 258
            H  P   C F  FF H+YT+S+ +    I +DF +   + R+ + A+   Q    + PT      A+  +PS+  +TFYLV +  GV+ D     +D+V  A   G   Y D+LCI+S+R+Q +HI++I+E+ G   E R IGA C  DD
Sbjct:   74 HLPPKAQC-FDSFFHHLYTVSLASANEFICKDFFLYVHTLRFGLFATSTAQA---NDPTTSSAEGAVHGVPSIEKITFYLVRLDDGVVLDEKAFCNDFVNLAHCTGAFLYDDLLCIVSLRYQTIHILQIRES-GNLVEVRKIGAYCQEDD 218          
BLAST of Gcaud2589.t1 vs. uniprot
Match: UPI001CC47011 (light-mediated development protein DET1-like isoform X1 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC47011)

HSP 1 Score: 90.1 bits (222), Expect = 1.450e-16
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 0
Query:  113 PSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMT-VTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDD 258
            PS   +F  FFT +Y +S+ +    I +DF +   S ++ + A+   Q   H  P       AI  +PS+  +TF+LV +  GVI D  +  +D+V  A   GV  Y D+L I+S+R+Q +HI++I+++ G F + R IG  C  DD
Sbjct:   94 PSKAKRFESFFTQLYCVSLASSNELICKDFFLYVESNKFGLFATSTAQV--HDAPAIGG---AIQGIPSIEKITFHLVRMEDGVILDEKVFCNDFVNLAHSMGVFLYDDLLAIVSLRYQTVHILQIRDS-GNFVDVRAIGTFCREDD 234          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A2P5APN6_PARAD (De-etiolated protein 1, Det n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5APN6_PARAD)

HSP 1 Score: 93.6 bits (231), Expect = 1.670e-16
Identity = 51/151 (33.77%), Postives = 85/151 (56.29%), Query Frame = 0
Query:  109 VHNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLPAISSLPSMT-VTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCIGAMCDRDD 258
            +H+ P    +F  FFT +Y +S+ +    I +DF +   S R+ + A+      P H  +      AI  +PSM  +TF+L+ +  G+I D  +  DD+V  A + GV+ + D+L I+S+R+Q +HI++IQ++ G   + R IGA C  DD
Sbjct:   90 IHDLPPKAKRFDSFFTQLYCVSLASSNELICKDFFLYMESNRFGLFAT---STAPTHDASPVGG--AIQGVPSMEKITFHLLRLEDGIILDEKVFQDDFVNLAHNMGVYLHDDLLAIVSLRYQTIHILQIQDS-GNLVDVRAIGAFCREDD 234          
BLAST of Gcaud2589.t1 vs. uniprot
Match: A0A7S1TBE6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBE6_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 2.100e-16
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   94 PIAASAAQQPQSPSHVHNHPS--YTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGRYLILASYQPQNQPHHPPTQQDHLP---AISSLPSMTVTFYLVEVRTGVIADRFILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTE 246
            P+   +  Q  + S VHN PS  +TC F +FFT ++   +  G   +  DF ++TS+ R+LI AS    ++        + L    +I++   M++TF+L ++    I DRF L  D V    H+ VH   D+L ILSMRHQ LHI++I ++ G F +
Sbjct:  202 PLQMHSISQEPTLSRVHNDPSKPFTCSFDRFFTKVFEGPVATGGDSLVEDFCLATSNNRFLIFASRAEISEAGGATQSGEALEEDVSIATAIVMSITFHLFDLAKWRIVDRFSLERDLVDLRQHQHVHLLNDLLLILSMRHQTLHILRIDDS-GSFAK 358          
The following BLAST results are available for this feature:
BLAST of Gcaud2589.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXU2_9FLOR9.000e-13742.90DET1-like n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QAJ5_CHOCR4.200e-8136.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XDY5_9RHOD4.830e-2725.88Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A388KXY9_CHABU9.450e-1837.93Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
W9QNQ8_9ROSA1.520e-1724.90Uncharacterized protein n=2 Tax=Morus notabilis Ta... [more]
A0A8B8JA34_PHODC3.940e-1735.06light-mediated development protein DET1 isoform X1... [more]
A0A833RFY7_9POAL1.080e-1636.00Light-mediated development protein DET1 n=1 Tax=Ca... [more]
UPI001CC470111.450e-1634.69light-mediated development protein DET1-like isofo... [more]
A0A2P5APN6_PARAD1.670e-1633.77De-etiolated protein 1, Det n=2 Tax=Cannabaceae Ta... [more]
A0A7S1TBE6_9RHOD2.100e-1634.81Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019138De-etiolated protein 1, Det1PFAMPF09737Det1coord: 140..356
e-value: 1.2E-24
score: 87.2
coord: 438..560
e-value: 3.7E-9
score: 36.1
IPR019138De-etiolated protein 1, Det1PANTHERPTHR13374DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOGcoord: 437..560
coord: 100..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..419
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_53_length_63756_cov_4.464180contigNODE_53_length_63756_cov_4.464180:17764..19746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2589.t1Gcaud2589.t1Gracilaria caudata M_176_S67 malemRNANODE_53_length_63756_cov_4.464180 17764..19746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2589.t1 ID=Gcaud2589.t1|Name=Gcaud2589.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=565bp
MRRRRGRRGMLHALRRRETGSLSGNSFRRATYSALVPSSTFIHVQKTQSI
SSTRASHVRIYDTSAFPPPSSLHPDFQLSSQPNQPSLLLSVPVPIAASAA
QQPQSPSHVHNHPSYTCQFAQFFTHMYTMSIVNGTAHIARDFSISTSSGR
YLILASYQPQNQPHHPPTQQDHLPAISSLPSMTVTFYLVEVRTGVIADRF
ILLDDYVRFASHEGVHFYGDMLCILSMRHQVLHIVKIQEALGKFTEERCI
GAMCDRDDHQVIARAREAQNAYVAHREEGSHSNSDKPAASYQPHGNENDH
NAQDAADVVEEGDDEAEQNEPKETGLGNGMLKNAFYIGLMQRLLVYVYRR
MHSEGNASLFYRVIGQYSFERHLFLRCVLDAFVGDEMEAASLPPSRNSVL
DEGQRREEENDQGNTTRRDGIGERADWWSSVASRRGTSERVRRTRLELSR
IPMSRQVRMVSPYLDRSLFSYNSERSYVLTARRFAPAKDLGSVKFMSAET
GELRFKLATEFSLLDGEVGGERYATDMEDGGLRRRMFLFHPLLPFVMAME
GHRPVNFHVYGHAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019138De-etiolated_protein_1_Det1