Gcaud2572.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2572.t1
Unique NameGcaud2572.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length564
Homology
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A2V3IGP1_9FLOR (Mitochondrial phosphate carrier protein 2, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP1_9FLOR)

HSP 1 Score: 559 bits (1440), Expect = 2.180e-188
Identity = 297/440 (67.50%), Postives = 346/440 (78.64%), Query Frame = 0
Query:   56 SEKARVQNLINDLVTRVQADSDATKSQTPSIQGVAVGDHRLRRIAHTPLTWTQTMDSLTLNIHVPDHVRKEHICIDFDSNSIGIDIRSPHAEQPYFALDRTFVSEIDVAGCMWGLEAASSSRKLIVEVEKAKVQWWARLFSTDNVADYTIVTQNDTPINAHSSQTVAQTNETTTTTPSSAKSVVPSAPQTNTPAGKSPERNAAPEED---LKQTVESVXXXXXXXXXXXXXXXXXXXXXQQRLQRPQRTTTRQKVLTRADLPKLVDEYRTAFKQGGQNSVESALQLATFYHHGIGVKQDDAEAVKLYRYALENGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERAHAINPQLKPPQLSKAQFAERVATAAKLRRERLRRELPPEEKRRRKELALQKILVA 492
            SEK RVQ+LIN+LVTRV +D+ AT + TP +QGV +GDHRLRRI + PLTWTQTMDSLTLNIHVP  VRKEHI I FDSNSI I IRS  +EQ Y  L+RTFV++IDVAGCMWGLEAAS+SRKLIVE+EKAKVQWWARLFSTD+VA+Y+IVT N   +N H+ Q    T  + T  P+ ++S +  +P  N  A   P+ + A  ++   L+Q V SV                       R       TTRQ++LTRAD+PK+VD+YR AFK GG +S+ESALQLATFYHHGIG+KQDDAEA +LYRYALENGALD SAAFQLGLIYNQGAPG+EP+PEEAVRWWKLSAGLGNPV+MFNLGVM+LNGSGCDL+P +AQQWFERAHA+NPQLKPPQLSKAQFAER+ATAAKLRRERLRRELPPEEK+RRKE ALQK+  A
Sbjct:  375 SEKDRVQSLINNLVTRVHSDAAATDASTPKLQGVPMGDHRLRRIGNIPLTWTQTMDSLTLNIHVPHQVRKEHIRIHFDSNSIHIAIRSTASEQLYLDLNRTFVADIDVAGCMWGLEAASASRKLIVELEKAKVQWWARLFSTDDVAEYSIVTPNQMLVNGHAPQPNRDTATSETAQPAPSESDI--SPNANGVASNPPKLHQAHRQESSSLEQAVASVVDDIVQNATSAAEKQKSEPSSPPR-------TTRQRMLTRADIPKIVDQYRAAFKSGGPSSIESALQLATFYHHGIGIKQDDAEAARLYRYALENGALDASAAFQLGLIYNQGAPGLEPDPEEAVRWWKLSAGLGNPVSMFNLGVMYLNGSGCDLDPLLAQQWFERAHAMNPQLKPPQLSKAQFAERMATAAKLRRERLRRELPPEEKQRRKEQALQKVRYA 805          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A1W9I0V8_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium SG_bin8 TaxID=1827387 RepID=A0A1W9I0V8_9PROT)

HSP 1 Score: 64.7 bits (156), Expect = 3.070e-8
Identity = 41/122 (33.61%), Postives = 58/122 (47.54%), Query Frame = 0
Query:  329 QNSVESALQLATFYHHGIGVKQDDAEAVKLYRYALENGALD----PSAAFQ------LGLIYNQGAPGVEPNPEEAVRW---WKLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERA 437
            Q   ES  +LA  Y  G GVK+DD +A   +   +EN A D    P A +       LG  Y  G PG E   + A+ W   +  ++  G+P   + +G M+L+GSG D  P +A  W   A
Sbjct:    6 QGDAESQWRLARRYARGEGVKRDDLQAFNWFSQIIENHADDDVSSPQAPYAKRAFVALGSYYLAGIPGTEIKQDFALAWRMFYHAASVFGDPEGQYQIGRMYLDGSGVDSNPRMAANWLRTA 127          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A1G5W0B1_9FIRM (TPR repeat n=1 Tax=Allisonella histaminiformans TaxID=209880 RepID=A0A1G5W0B1_9FIRM)

HSP 1 Score: 66.6 bits (161), Expect = 9.140e-8
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 0
Query:  335 ALQLATFYHHGIGVKQDDAEAVKLYRYALE-NGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERAH 438
            A  LA  Y  G GVK +  +A+K Y  A E +      AA +LG++Y  G PG+  +  +A+ W++ S  LG    +++L  M+  G GC ++ E A Q +ERA+
Sbjct:  334 AYNLADNYALGRGVKYNPKKAIKYYTMAYEQDDEASGEAANRLGMLYENGLPGLSVDFSKALAWYRKSVDLGCAPGLYDLAGMYDQGKGCTMDKEKALQLYERAY 438          
BLAST of Gcaud2572.t1 vs. uniprot
Match: M2XK53_GALSU (Sel1 domain protein repeat-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XK53_GALSU)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-7
Identity = 42/150 (28.00%), Postives = 75/150 (50.00%), Query Frame = 0
Query:  318 DEYRTAFKQGGQNSVESALQLATFYHHGIGVK---QDDAEAVKLYRYALENGALDPSAAFQLGLIYN---------------QGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERAHAINPQLKPPQL 449
            +E    F Q  Q+  E+ + +       +G+    ++  + V+ YR  +E       AAF LG +Y+               +G  G+E N E+A++ W++ A  GNP AM+NLGV++L+G+GC  +   A    + A++++P L  P +
Sbjct:  125 EEKMEIFLQNIQSRKENKVDIGGQEEDVLGIPVTPENVQQVVETYRRGVEEKE-SGIAAFHLGRLYHFGICLDTNYREALQCEGGYGIEQNWEQAIQLWQMGADNGNPYAMYNLGVLYLHGNGCQQDVTRALLLLKAANSLDPSLVIPDI 273          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A3D2Z8G4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A3D2Z8G4_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-7
Identity = 34/92 (36.96%), Postives = 45/92 (48.91%), Query Frame = 0
Query:  345 GIGVKQDDAEAVKLYRYALENGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFER 436
            G+G  Q   E     R   E G  D  A F LG IY  G  GV  +  EAVRWW+++A  GN +A + L + + NG+G   +   A  W  R
Sbjct:   20 GVGAAQQ--EYTDELRAKAEQG--DAEAQFDLGSIYEYGIGGVPQDQAEAVRWWRMAAEQGNLLASYGLALQYFNGNGVPQDDVFAHMWANR 107          
BLAST of Gcaud2572.t1 vs. uniprot
Match: UPI0011799E5E (caspase family protein n=1 Tax=Rhizobium arenae TaxID=1856850 RepID=UPI0011799E5E)

HSP 1 Score: 64.3 bits (155), Expect = 3.500e-7
Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  333 ESALQLATFYHHGIGVKQDDAEAVKLYRYALENGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNG 420
            E+  +LA  Y  GIGV+QD AEA++LYR + + G  D  A   LG  + QG  G+  +P++A++ ++ +A L +P AMFN+  +  +G
Sbjct:  379 EATFELAKLYERGIGVQQDLAEALRLYRTSADMGFAD--AINDLGFFHYQGIQGLPRDPQKAIQLFQRAADLRHPQAMFNVAALIDDG 464          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A2G6IBM5_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacterales bacterium TaxID=1948890 RepID=A0A2G6IBM5_9RHOB)

HSP 1 Score: 63.2 bits (152), Expect = 6.960e-7
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 0
Query:  334 SALQLATFYHHGIGVKQDDAEAVKLYRYALENGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKLSAGLGNPVAMFNLGVMFLNGSG 422
            +AL +A  Y   +   +  A+A+  Y  A E G LD   A  L  +   GAPG+EP+P E  RW++++A   +P A F LG  F NG G
Sbjct:  158 AALTVAQLYQRQVVPDRGPADALPFYAIAAEAGVLDAQEA--LATLLTDGAPGLEPDPAEGARWFRVAAEQNSPKAAFELGWAFENGFG 244          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A8I1P9L6_9HYPH (Sel1 repeat family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A8I1P9L6_9HYPH)

HSP 1 Score: 60.5 bits (145), Expect = 1.830e-6
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 0
Query:  317 VDEYRTAFKQGGQNSVESALQLATFYHHGIGVKQDDAEAVKLY----RYALENGALDPS----AAFQLGLIYNQGAPG--VEPNPEEAVRWW-KLSAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERA 437
            ++ YR A + G    + ++ +LA  Y  G GV +DD EA K Y    R  +E    D S    A  +L     +G PG  V+ NP+ A  ++ + +A   NPVA + +G+MFLNG G     + A +W + A
Sbjct:   63 IEAYRYAAENG---QIGASWKLARMYAEGDGVARDDYEAFKFYSEIARQDVEPDNPDVSYVADALVELAHYLRRGIPGSPVQANPQAAQDYYMRAAANYRNPVAQYEVGLMFLNGEGVRKSVQTAGRWLQLA 191          
BLAST of Gcaud2572.t1 vs. uniprot
Match: A0A2S4LKU6_9HYPH (Exopolysaccharide biosynthesis protein n=10 Tax=Methylobacterium TaxID=407 RepID=A0A2S4LKU6_9HYPH)

HSP 1 Score: 58.9 bits (141), Expect = 6.340e-6
Identity = 46/149 (30.87%), Postives = 68/149 (45.64%), Query Frame = 0
Query:  317 VDEYRTAFKQGGQNSVESALQ---------LATFYHHGIGVKQDDAEAVKLY-RYA---------LENGALDPSAAFQLGLIYNQGAPG--VEPNPEEAVRWWKLSAG-LGNPVAMFNLGVMFLNGSGCDLEPEVAQQWF----ERAHA 439
            V +Y    K+G   ++E A +         L   Y  G GV  DD +A + + R A          +N  +  SA   LG  +  G  G  V PNPE A   +  +A   G+P A +NLG ++L+G+G D +   A +WF    E+ HA
Sbjct:   46 VRDYNAGDKEGAARALEYAAEQGHALALWKLGRMYAEGDGVPHDDLKAFEFFSRIADDTTDEGPDAQNSGVVASAFTALGTYFLDGIKGTYVRPNPERAYDMFNYAASYFGDPNAQYNLGRLYLDGTGVDTDARQAARWFNLAAEKGHA 194          
The following BLAST results are available for this feature:
BLAST of Gcaud2572.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IGP1_9FLOR2.180e-18867.50Mitochondrial phosphate carrier protein 2, mitocho... [more]
A0A1W9I0V8_9PROT3.070e-833.61Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A1G5W0B1_9FIRM9.140e-835.24TPR repeat n=1 Tax=Allisonella histaminiformans Ta... [more]
M2XK53_GALSU1.350e-728.00Sel1 domain protein repeat-containing protein n=1 ... [more]
A0A3D2Z8G4_9BACT1.380e-736.96Uncharacterized protein n=1 Tax=Candidatus Latesci... [more]
UPI0011799E5E3.500e-738.64caspase family protein n=1 Tax=Rhizobium arenae Ta... [more]
A0A2G6IBM5_9RHOB6.960e-738.20Uncharacterized protein n=1 Tax=Rhodobacterales ba... [more]
A0A8I1P9L6_9HYPH1.830e-633.33Sel1 repeat family protein n=1 Tax=Hyphomicrobiale... [more]
A0A2S4LKU6_9HYPH6.340e-630.87Exopolysaccharide biosynthesis protein n=10 Tax=Me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 452..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR46430PROTEIN SKT5-RELATEDcoord: 329..402
coord: 370..439
coord: 386..439
NoneNo IPR availableCDDcd06467p23_NUDC_likecoord: 105..195
e-value: 2.43591E-13
score: 63.7206
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 318..443
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 332..367
e-value: 1.9E-6
score: 37.4
coord: 370..406
e-value: 3.6E-8
score: 43.2
coord: 407..442
e-value: 0.0069
score: 25.6
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 370..406
e-value: 1.5E-6
score: 28.7
coord: 407..437
e-value: 6.5E-4
score: 20.3
coord: 333..366
e-value: 3.5E-5
score: 24.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 300..495
e-value: 1.7E-35
score: 125.1
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 99..206
e-value: 1.6E-17
score: 65.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 98..205
IPR007052CS domainPFAMPF04969CScoord: 105..172
e-value: 4.6E-8
score: 33.9
IPR007052CS domainPROSITEPS51203CScoord: 99..195
score: 14.198931

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1064_length_14381_cov_4.633380contigNODE_1064_length_14381_cov_4.633380:7051..9043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2572.t1Gcaud2572.t1Gracilaria caudata M_176_S67 malemRNANODE_1064_length_14381_cov_4.633380 7051..9043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2572.t1 ID=Gcaud2572.t1|Name=Gcaud2572.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=564bp
MASSAALSPTPPPRAARPRPSAKPASSSKADSLHDTVQEVVNGVVNEAAT
RAALRSEKARVQNLINDLVTRVQADSDATKSQTPSIQGVAVGDHRLRRIA
HTPLTWTQTMDSLTLNIHVPDHVRKEHICIDFDSNSIGIDIRSPHAEQPY
FALDRTFVSEIDVAGCMWGLEAASSSRKLIVEVEKAKVQWWARLFSTDNV
ADYTIVTQNDTPINAHSSQTVAQTNETTTTTPSSAKSVVPSAPQTNTPAG
KSPERNAAPEEDLKQTVESVVENMVQEATKETVTPAPNPAPQQRLQRPQR
TTTRQKVLTRADLPKLVDEYRTAFKQGGQNSVESALQLATFYHHGIGVKQ
DDAEAVKLYRYALENGALDPSAAFQLGLIYNQGAPGVEPNPEEAVRWWKL
SAGLGNPVAMFNLGVMFLNGSGCDLEPEVAQQWFERAHAINPQLKPPQLS
KAQFAERVATAAKLRRERLRRELPPEEKRRRKELALQKILVAQSTLGTWS
SRSRNTGTGLRHVNTESKDSMAQLEIVLTIVVRTRGFQVKGLFRLTRSSS
LEVFRLELHGRYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf
IPR008978HSP20-like_chaperone
IPR007052CS_dom